RNA–Protein interactions for RNA: ENST00000495473.1

RGPD5-212, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 3

Gene RGPD5, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-212ENST00000495473 AEBP2Q6ZN18 517 aaPredicted RBP17.32■□□□□ 0.36
RGPD5-212ENST00000495473 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
RGPD5-212ENST00000495473 PHF23Q9BUL5 403 aaPredicted RBP15.01□□□□□ -0.01
RGPD5-212ENST00000495473 SENP3Q9H4L4 574 aaPredicted RBP14.71□□□□□ -0.05
RGPD5-212ENST00000495473 PLPPR3Q6T4P5 718 aa13.93□□□□□ -0.18
RGPD5-212ENST00000495473 FOXD1Q16676 465 aa13.63□□□□□ -0.23
RGPD5-212ENST00000495473 ADRA2BP18089 450 aa13.24□□□□□ -0.29
RGPD5-212ENST00000495473 PPP6R1Q9UPN7 881 aa13.23□□□□□ -0.29
RGPD5-212ENST00000495473 PIAS4Q8N2W9 510 aaPredicted RBP12.9□□□□□ -0.34
RGPD5-212ENST00000495473 MSH5O43196 834 aa12.53□□□□□ -0.4
RGPD5-212ENST00000495473 PPP4R3CPQ6ZMV5 832 aa12.3□□□□□ -0.44
RGPD5-212ENST00000495473 SCAF1Q9H7N4 1312 aaKnown RBP12.15□□□□□ -0.46
RGPD5-212ENST00000495473 KCNA4P22459 653 aa12.13□□□□□ -0.47
RGPD5-212ENST00000495473 NCBP3Q53F19 620 aaKnown RBP12.04□□□□□ -0.48
RGPD5-212ENST00000495473 MAPK8IP2Q13387 824 aaPredicted RBP11.99□□□□□ -0.49
RGPD5-212ENST00000495473 CNKSR2Q8WXI2 1034 aa11.92□□□□□ -0.5
RGPD5-212ENST00000495473 NPM3O75607 178 aaKnown RBP11.81□□□□□ -0.52
RGPD5-212ENST00000495473 DMRT2Q9Y5R5 561 aa11.74□□□□□ -0.53
RGPD5-212ENST00000495473 RNF216Q9NWF9 866 aaPredicted RBP11.64□□□□□ -0.55
RGPD5-212ENST00000495473 SLC4A1APQ9BWU0 796 aaKnown RBP11.59□□□□□ -0.55
RGPD5-212ENST00000495473 HOXD11P31277 338 aaPredicted RBP11.55□□□□□ -0.56
RGPD5-212ENST00000495473 EHMT2Q96KQ7 1210 aa11.4□□□□□ -0.58
RGPD5-212ENST00000495473 DNAJC5BQ9UF47 199 aa11.4□□□□□ -0.58
RGPD5-212ENST00000495473 DCAF8L1A6NGE4 600 aa11.31□□□□□ -0.6
RGPD5-212ENST00000495473 CSRNP3Q8WYN3 585 aa11.21□□□□□ -0.61
RGPD5-212ENST00000495473 POTEDQ86YR6 584 aa11.19□□□□□ -0.62
RGPD5-212ENST00000495473 ZBTB22O15209 634 aa11.12□□□□□ -0.63
RGPD5-212ENST00000495473 FOXD4L1Q9NU39 408 aa11.12□□□□□ -0.63
RGPD5-212ENST00000495473 SLC4A2P04920 1241 aa11.11□□□□□ -0.63
RGPD5-212ENST00000495473 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.07□□□□□ -0.64
RGPD5-212ENST00000495473 MYCNP04198 464 aaPredicted RBP10.91□□□□□ -0.66
RGPD5-212ENST00000495473 U3KPZ7 1027 aaPredicted RBP10.83□□□□□ -0.68
RGPD5-212ENST00000495473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.79□□□□□ -0.68
RGPD5-212ENST00000495473 HNRNPUL2Q1KMD3 747 aaKnown RBP10.79□□□□□ -0.68
RGPD5-212ENST00000495473 SAMD1Q6SPF0 538 aaPredicted RBP10.75□□□□□ -0.69
RGPD5-212ENST00000495473 ATXN8OSP0DMR3 200 aa10.74□□□□□ -0.69
RGPD5-212ENST00000495473 RNF39Q9H2S5 420 aa10.73□□□□□ -0.69
RGPD5-212ENST00000495473 APLP2Q06481 763 aa10.65□□□□□ -0.7
RGPD5-212ENST00000495473 C1QBPQ07021 282 aaKnown RBP10.64□□□□□ -0.71
RGPD5-212ENST00000495473 ATF5Q9Y2D1 282 aaPredicted RBP10.61□□□□□ -0.71
RGPD5-212ENST00000495473 SPINK5Q9NQ38 1064 aaPredicted RBP10.52□□□□□ -0.73
RGPD5-212ENST00000495473 CAPN15O75808 1086 aa10.51□□□□□ -0.73
RGPD5-212ENST00000495473 TRHP20396 242 aaPredicted RBP10.5□□□□□ -0.73
RGPD5-212ENST00000495473 ZNF219Q9P2Y4 722 aaPredicted RBP10.46□□□□□ -0.73
RGPD5-212ENST00000495473 CACNB1Q02641 598 aaPredicted RBP10.43□□□□□ -0.74
RGPD5-212ENST00000495473 POLA2Q14181 598 aa10.35□□□□□ -0.75
RGPD5-212ENST00000495473 ABCB7O75027 752 aa10.3□□□□□ -0.76
RGPD5-212ENST00000495473 DSG3P32926 999 aa10.27□□□□□ -0.77
RGPD5-212ENST00000495473 FBLN2P98095 1184 aa10.2□□□□□ -0.78
RGPD5-212ENST00000495473 ZBTB12Q9Y330 459 aaPredicted RBP10.16□□□□□ -0.78
RGPD5-212ENST00000495473 MKRN4PQ13434 485 aaPredicted RBP10.14□□□□□ -0.79
RGPD5-212ENST00000495473 FKBP8Q14318 412 aa10.14□□□□□ -0.79
RGPD5-212ENST00000495473 SPDYE4A6NLX3 237 aa10.01□□□□□ -0.81
RGPD5-212ENST00000495473 OSCARQ8IYS5 282 aa9.94□□□□□ -0.82
RGPD5-212ENST00000495473 ZNF692Q9BU19 519 aaPredicted RBP9.92□□□□□ -0.82
RGPD5-212ENST00000495473 NISCHQ9Y2I1 1504 aa9.92□□□□□ -0.82
RGPD5-212ENST00000495473 SPDYE2BA6NHP3 402 aa9.9□□□□□ -0.82
RGPD5-212ENST00000495473 SPDYE6P0CI01 402 aa9.9□□□□□ -0.82
RGPD5-212ENST00000495473 SPDYE2Q495Y8 402 aa9.9□□□□□ -0.82
RGPD5-212ENST00000495473 PROM2Q8N271 834 aa9.79□□□□□ -0.84
RGPD5-212ENST00000495473 RBM42Q9BTD8 480 aaKnown RBP9.79□□□□□ -0.84
RGPD5-212ENST00000495473 SSUH2Q9Y2M2 353 aa9.79□□□□□ -0.84
RGPD5-212ENST00000495473 PABPN1Q86U42 306 aaKnown RBP eCLIP9.77□□□□□ -0.85
RGPD5-212ENST00000495473 FBXO3Q9UK99 471 aa9.77□□□□□ -0.85
RGPD5-212ENST00000495473 AKT1S1Q96B36 256 aa9.7□□□□□ -0.86
RGPD5-212ENST00000495473 STAG3Q9UJ98 1225 aa9.65□□□□□ -0.86
RGPD5-212ENST00000495473 REM2Q8IYK8 340 aaPredicted RBP9.62□□□□□ -0.87
RGPD5-212ENST00000495473 SPDYE1Q8NFV5 336 aaPredicted RBP9.59□□□□□ -0.87
RGPD5-212ENST00000495473 VASPP50552 380 aaPredicted RBP9.58□□□□□ -0.88
RGPD5-212ENST00000495473 CLEC11AQ9Y240 323 aa9.57□□□□□ -0.88
RGPD5-212ENST00000495473 MIER1Q8N108 512 aa9.54□□□□□ -0.88
RGPD5-212ENST00000495473 PLCD3Q8N3E9 789 aa9.52□□□□□ -0.89
RGPD5-212ENST00000495473 SLC24A1O60721 1099 aa9.51□□□□□ -0.89
RGPD5-212ENST00000495473 PRR29P0C7W0 189 aa9.5□□□□□ -0.89
RGPD5-212ENST00000495473 PLEKHG5O94827 1062 aa9.48□□□□□ -0.89
RGPD5-212ENST00000495473 IFNLR1Q8IU57 520 aaPredicted RBP9.48□□□□□ -0.89
RGPD5-212ENST00000495473 KLHL34Q8N239 644 aa9.48□□□□□ -0.89
RGPD5-212ENST00000495473 ABCC9O60706 1549 aa9.47□□□□□ -0.89
RGPD5-212ENST00000495473 PITPNM1O00562 1244 aa9.47□□□□□ -0.89
RGPD5-212ENST00000495473 AMER1Q5JTC6 1135 aaPredicted RBP9.44□□□□□ -0.9
RGPD5-212ENST00000495473 RTN4Q9NQC3 1192 aaKnown RBP9.4□□□□□ -0.9
RGPD5-212ENST00000495473 ZBTB47Q9UFB7 747 aaPredicted RBP9.38□□□□□ -0.91
RGPD5-212ENST00000495473 SPOCK2Q92563 424 aa9.37□□□□□ -0.91
RGPD5-212ENST00000495473 CREBZFQ9NS37 354 aa9.36□□□□□ -0.91
RGPD5-212ENST00000495473 CHRDL2Q6WN34 429 aa9.33□□□□□ -0.92
RGPD5-212ENST00000495473 CHADLQ6NUI6 762 aa9.29□□□□□ -0.92
RGPD5-212ENST00000495473 FXR2P51116 673 aaKnown RBP eCLIP9.28□□□□□ -0.92
RGPD5-212ENST00000495473 PRKAR2AP13861 404 aaKnown RBP9.27□□□□□ -0.93
RGPD5-212ENST00000495473 NPM1P06748 294 aaKnown RBP eCLIP9.26□□□□□ -0.93
RGPD5-212ENST00000495473 MNX1P50219 401 aaPredicted RBP9.25□□□□□ -0.93
RGPD5-212ENST00000495473 PIP4P2Q8N4L2 257 aa9.24□□□□□ -0.93
RGPD5-212ENST00000495473 CIZ1Q9ULV3 898 aaPredicted RBP9.23□□□□□ -0.93
RGPD5-212ENST00000495473 FARP1Q9Y4F1 1045 aaPredicted RBP9.22□□□□□ -0.93
RGPD5-212ENST00000495473 NUBP1P53384 320 aa9.21□□□□□ -0.94
RGPD5-212ENST00000495473 DCAF8Q5TAQ9 597 aa9.21□□□□□ -0.94
RGPD5-212ENST00000495473 PKD2Q13563 968 aa9.19□□□□□ -0.94
RGPD5-212ENST00000495473 GSE1Q14687 1217 aa9.17□□□□□ -0.94
RGPD5-212ENST00000495473 ECM2O94769 699 aaPredicted RBP9.15□□□□□ -0.94
RGPD5-212ENST00000495473 FAM212AQ96EL1 285 aa9.15□□□□□ -0.94
RGPD5-212ENST00000495473 RASEFQ8IZ41 740 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms