RNA–Protein interactions for RNA: ENST00000495092.1

EXOSC8-211, Transcript of exosome component 8, humanhuman

TSL 3

Gene EXOSC8, Length 818 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8-211ENST00000495092 AEBP2Q6ZN18 517 aaPredicted RBP26.45■■□□□ 1.82
EXOSC8-211ENST00000495092 CHIC1Q5VXU3 224 aa24.91■■□□□ 1.58
EXOSC8-211ENST00000495092 SENP3Q9H4L4 574 aaPredicted RBP22.49■■□□□ 1.19
EXOSC8-211ENST00000495092 PHF23Q9BUL5 403 aaPredicted RBP22.23■■□□□ 1.15
EXOSC8-211ENST00000495092 FOXD1Q16676 465 aa21.04■□□□□ 0.96
EXOSC8-211ENST00000495092 PLPPR3Q6T4P5 718 aa19.8■□□□□ 0.76
EXOSC8-211ENST00000495092 MSH5O43196 834 aa19.68■□□□□ 0.74
EXOSC8-211ENST00000495092 PPP6R1Q9UPN7 881 aa19.6■□□□□ 0.73
EXOSC8-211ENST00000495092 PIAS4Q8N2W9 510 aaPredicted RBP19.57■□□□□ 0.72
EXOSC8-211ENST00000495092 POTEDQ86YR6 584 aa19.53■□□□□ 0.72
EXOSC8-211ENST00000495092 ADRA2BP18089 450 aa19.49■□□□□ 0.71
EXOSC8-211ENST00000495092 MAPK8IP2Q13387 824 aaPredicted RBP17.97■□□□□ 0.47
EXOSC8-211ENST00000495092 DMRT2Q9Y5R5 561 aa17.84■□□□□ 0.45
EXOSC8-211ENST00000495092 SCAF1Q9H7N4 1312 aaKnown RBP17.73■□□□□ 0.43
EXOSC8-211ENST00000495092 PPP4R3CPQ6ZMV5 832 aa17.35■□□□□ 0.37
EXOSC8-211ENST00000495092 HOXD11P31277 338 aaPredicted RBP17.14■□□□□ 0.33
EXOSC8-211ENST00000495092 DCAF8L1A6NGE4 600 aa17.06■□□□□ 0.32
EXOSC8-211ENST00000495092 CNKSR2Q8WXI2 1034 aa17.05■□□□□ 0.32
EXOSC8-211ENST00000495092 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
EXOSC8-211ENST00000495092 RNF216Q9NWF9 866 aaPredicted RBP16.94■□□□□ 0.3
EXOSC8-211ENST00000495092 RNF39Q9H2S5 420 aa16.83■□□□□ 0.28
EXOSC8-211ENST00000495092 NCBP3Q53F19 620 aaKnown RBP16.58■□□□□ 0.24
EXOSC8-211ENST00000495092 DNAJC5BQ9UF47 199 aa16.56■□□□□ 0.24
EXOSC8-211ENST00000495092 C1QBPQ07021 282 aaKnown RBP16.54■□□□□ 0.24
EXOSC8-211ENST00000495092 NPM3O75607 178 aaKnown RBP16.41■□□□□ 0.22
EXOSC8-211ENST00000495092 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.27■□□□□ 0.21e-7■□□□□ 11
EXOSC8-211ENST00000495092 KCNA4P22459 653 aa15.97■□□□□ 0.15
EXOSC8-211ENST00000495092 U3KPZ7 1027 aaPredicted RBP15.97■□□□□ 0.15
EXOSC8-211ENST00000495092 SPINK5Q9NQ38 1064 aaPredicted RBP15.79■□□□□ 0.12
EXOSC8-211ENST00000495092 SLC4A2P04920 1241 aa15.75■□□□□ 0.11
EXOSC8-211ENST00000495092 CAPN15O75808 1086 aa15.71■□□□□ 0.11
EXOSC8-211ENST00000495092 DSG3P32926 999 aa15.71■□□□□ 0.11
EXOSC8-211ENST00000495092 TRHP20396 242 aaPredicted RBP15.43■□□□□ 0.06
EXOSC8-211ENST00000495092 APLP2Q06481 763 aa15.39■□□□□ 0.05
EXOSC8-211ENST00000495092 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
EXOSC8-211ENST00000495092 HNRNPUL2Q1KMD3 747 aaKnown RBP15.37■□□□□ 0.05
EXOSC8-211ENST00000495092 ZNF219Q9P2Y4 722 aaPredicted RBP15.37■□□□□ 0.05
EXOSC8-211ENST00000495092 ABCB7O75027 752 aa15.36■□□□□ 0.05
EXOSC8-211ENST00000495092 SAMD1Q6SPF0 538 aaPredicted RBP15.3■□□□□ 0.04
EXOSC8-211ENST00000495092 POTEHQ6S545 545 aa15.25■□□□□ 0.03
EXOSC8-211ENST00000495092 MYCNP04198 464 aaPredicted RBP15.13■□□□□ 0.01
EXOSC8-211ENST00000495092 POLA2Q14181 598 aa15.01□□□□□ -0.01
EXOSC8-211ENST00000495092 SLC4A1APQ9BWU0 796 aaKnown RBP15□□□□□ -0.01
EXOSC8-211ENST00000495092 RBM42Q9BTD8 480 aaKnown RBP14.91□□□□□ -0.02
EXOSC8-211ENST00000495092 FOXD4L1Q9NU39 408 aa14.91□□□□□ -0.02
EXOSC8-211ENST00000495092 ATF5Q9Y2D1 282 aaPredicted RBP14.89□□□□□ -0.03
EXOSC8-211ENST00000495092 ZBTB22O15209 634 aa14.72□□□□□ -0.05
EXOSC8-211ENST00000495092 CHRDL2Q6WN34 429 aa14.7□□□□□ -0.06
EXOSC8-211ENST00000495092 ZBTB12Q9Y330 459 aaPredicted RBP14.62□□□□□ -0.07
EXOSC8-211ENST00000495092 AKT1S1Q96B36 256 aa14.58□□□□□ -0.08
EXOSC8-211ENST00000495092 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
EXOSC8-211ENST00000495092 ATXN8OSP0DMR3 200 aa14.47□□□□□ -0.09
EXOSC8-211ENST00000495092 REM2Q8IYK8 340 aaPredicted RBP14.47□□□□□ -0.09
EXOSC8-211ENST00000495092 PIP4P2Q8N4L2 257 aa14.34□□□□□ -0.11
EXOSC8-211ENST00000495092 PITPNM1O00562 1244 aa14.31□□□□□ -0.12
EXOSC8-211ENST00000495092 FXR2P51116 673 aaKnown RBP eCLIP14.24□□□□□ -0.13
EXOSC8-211ENST00000495092 SP7Q8TDD2 431 aaPredicted RBP14.22□□□□□ -0.13
EXOSC8-211ENST00000495092 SPDYE2BA6NHP3 402 aa14.2□□□□□ -0.14
EXOSC8-211ENST00000495092 SPDYE6P0CI01 402 aa14.2□□□□□ -0.14
EXOSC8-211ENST00000495092 FBLN2P98095 1184 aa14.2□□□□□ -0.14
EXOSC8-211ENST00000495092 SPDYE2Q495Y8 402 aa14.2□□□□□ -0.14
EXOSC8-211ENST00000495092 MKRN4PQ13434 485 aaPredicted RBP14.19□□□□□ -0.14
EXOSC8-211ENST00000495092 HAX1O00165 279 aa14.09□□□□□ -0.15
EXOSC8-211ENST00000495092 SSUH2Q9Y2M2 353 aa14.02□□□□□ -0.17
EXOSC8-211ENST00000495092 ZNF692Q9BU19 519 aaPredicted RBP14.01□□□□□ -0.17
EXOSC8-211ENST00000495092 EVX2Q03828 476 aa14□□□□□ -0.17
EXOSC8-211ENST00000495092 SPDYE1Q8NFV5 336 aaPredicted RBP13.98□□□□□ -0.17
EXOSC8-211ENST00000495092 CLEC11AQ9Y240 323 aa13.96□□□□□ -0.17
EXOSC8-211ENST00000495092 NISCHQ9Y2I1 1504 aa13.93□□□□□ -0.18
EXOSC8-211ENST00000495092 PRKAR2AP13861 404 aaKnown RBP13.92□□□□□ -0.18
EXOSC8-211ENST00000495092 CSRNP3Q8WYN3 585 aa13.89□□□□□ -0.19
EXOSC8-211ENST00000495092 PABPN1Q86U42 306 aaKnown RBP eCLIP13.8□□□□□ -0.2
EXOSC8-211ENST00000495092 C19orf67A6NJJ6 358 aa13.78□□□□□ -0.2
EXOSC8-211ENST00000495092 CHADLQ6NUI6 762 aa13.76□□□□□ -0.21
EXOSC8-211ENST00000495092 PRR29P0C7W0 189 aa13.72□□□□□ -0.21
EXOSC8-211ENST00000495092 GABBR2O75899 941 aa13.61□□□□□ -0.23
EXOSC8-211ENST00000495092 EHMT2Q96KQ7 1210 aa13.55□□□□□ -0.24
EXOSC8-211ENST00000495092 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
EXOSC8-211ENST00000495092 CD44P16070 742 aaKnown RBP13.46□□□□□ -0.25
EXOSC8-211ENST00000495092 CREBZFQ9NS37 354 aa13.39□□□□□ -0.27
EXOSC8-211ENST00000495092 ABCC9O60706 1549 aa13.39□□□□□ -0.27
EXOSC8-211ENST00000495092 SPDYE4A6NLX3 237 aa13.38□□□□□ -0.27
EXOSC8-211ENST00000495092 POTEIP0CG38 1075 aa13.37□□□□□ -0.27
EXOSC8-211ENST00000495092 STAG3Q9UJ98 1225 aa13.35□□□□□ -0.27
EXOSC8-211ENST00000495092 LHX8Q68G74 356 aa13.34□□□□□ -0.27
EXOSC8-211ENST00000495092 CLCN6P51797 869 aa13.29□□□□□ -0.28
EXOSC8-211ENST00000495092 ZNF579Q8NAF0 562 aaKnown RBP13.26□□□□□ -0.29
EXOSC8-211ENST00000495092 ZRANB1Q9UGI0 708 aa13.25□□□□□ -0.29
EXOSC8-211ENST00000495092 MNX1P50219 401 aaPredicted RBP13.17□□□□□ -0.3
EXOSC8-211ENST00000495092 DCBLD2Q96PD2 775 aa13.16□□□□□ -0.3
EXOSC8-211ENST00000495092 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
EXOSC8-211ENST00000495092 PROM2Q8N271 834 aa13.08□□□□□ -0.32
EXOSC8-211ENST00000495092 PHF12Q96QT6 1004 aa13.08□□□□□ -0.32
EXOSC8-211ENST00000495092 NPM1P06748 294 aaKnown RBP eCLIP13.06□□□□□ -0.32
EXOSC8-211ENST00000495092 PAK3O75914 559 aaPredicted RBP13.04□□□□□ -0.32
EXOSC8-211ENST00000495092 POTEB2H3BUK9 544 aa12.93□□□□□ -0.34
EXOSC8-211ENST00000495092 PELP1Q8IZL8 1130 aaKnown RBP12.93□□□□□ -0.34
EXOSC8-211ENST00000495092 OTUD5Q96G74 571 aa12.89□□□□□ -0.35
EXOSC8-211ENST00000495092 MS4A3Q96HJ5 214 aa12.89□□□□□ -0.35
EXOSC8-211ENST00000495092 TSPYL2Q9H2G4 693 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms