RNA–Protein interactions for RNA: ENST00000494261.1

CLASP2-222, Transcript of cytoplasmic linker associated protein 2, human

TSL 4

Gene CLASP2, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLASP2-222	ENST00000494261	AEBP2	Q6ZN18	517 aa	Predicted RBP	19.13	■□□□□ 0.65
CLASP2-222	ENST00000494261	CHIC1	Q5VXU3	224 aa		18.44	■□□□□ 0.54
CLASP2-222	ENST00000494261	PHF23	Q9BUL5	403 aa	Predicted RBP	16.31	■□□□□ 0.2
CLASP2-222	ENST00000494261	SENP3	Q9H4L4	574 aa	Predicted RBP	16.31	■□□□□ 0.2
CLASP2-222	ENST00000494261	PLPPR3	Q6T4P5	718 aa		15.43	■□□□□ 0.06
CLASP2-222	ENST00000494261	FOXD1	Q16676	465 aa		15.14	■□□□□ 0.01
CLASP2-222	ENST00000494261	EHMT2	Q96KQ7	1210 aa		14.75	□□□□□ -0.05
CLASP2-222	ENST00000494261	KCNA4	P22459	653 aa		14.5	□□□□□ -0.09
CLASP2-222	ENST00000494261	ADRA2B	P18089	450 aa		14.4	□□□□□ -0.1
CLASP2-222	ENST00000494261	PPP6R1	Q9UPN7	881 aa		14.35	□□□□□ -0.11
CLASP2-222	ENST00000494261	PIAS4	Q8N2W9	510 aa	Predicted RBP	14.22	□□□□□ -0.13
CLASP2-222	ENST00000494261	MSH5	O43196	834 aa		14.1	□□□□□ -0.15
CLASP2-222	ENST00000494261	CSRNP3	Q8WYN3	585 aa		14.07	□□□□□ -0.16
CLASP2-222	ENST00000494261	SLC4A1AP	Q9BWU0	796 aa	Known RBP	14	□□□□□ -0.17
CLASP2-222	ENST00000494261	POTED	Q86YR6	584 aa		13.99	□□□□□ -0.17
CLASP2-222	ENST00000494261	PPP4R3CP	Q6ZMV5	832 aa		13.72	□□□□□ -0.21
CLASP2-222	ENST00000494261	NCBP3	Q53F19	620 aa	Known RBP	13.67	□□□□□ -0.22
CLASP2-222	ENST00000494261	SLC24A1	O60721	1099 aa		13.59	□□□□□ -0.23
CLASP2-222	ENST00000494261	NPM3	O75607	178 aa	Known RBP	13.44	□□□□□ -0.26
CLASP2-222	ENST00000494261	ZBTB22	O15209	634 aa		13.34	□□□□□ -0.27
CLASP2-222	ENST00000494261	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.29	□□□□□ -0.28
CLASP2-222	ENST00000494261	RTN4	Q9NQC3	1192 aa	Known RBP	13.27	□□□□□ -0.29
CLASP2-222	ENST00000494261	SCAF1	Q9H7N4	1312 aa	Known RBP	13.14	□□□□□ -0.31
CLASP2-222	ENST00000494261	CNKSR2	Q8WXI2	1034 aa		13.12	□□□□□ -0.31
CLASP2-222	ENST00000494261	NISCH	Q9Y2I1	1504 aa		13.09	□□□□□ -0.31
CLASP2-222	ENST00000494261	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.07	□□□□□ -0.32
CLASP2-222	ENST00000494261	FOXD4L1	Q9NU39	408 aa		13.07	□□□□□ -0.32
CLASP2-222	ENST00000494261	DMRT2	Q9Y5R5	561 aa		12.97	□□□□□ -0.33
CLASP2-222	ENST00000494261	DNAJC5B	Q9UF47	199 aa		12.84	□□□□□ -0.35
CLASP2-222	ENST00000494261	FKBP8	Q14318	412 aa		12.7	□□□□□ -0.38
CLASP2-222	ENST00000494261	RNF216	Q9NWF9	866 aa	Predicted RBP	12.61	□□□□□ -0.39
CLASP2-222	ENST00000494261	HOXD11	P31277	338 aa	Predicted RBP	12.59	□□□□□ -0.39
CLASP2-222	ENST00000494261	ATXN8OS	P0DMR3	200 aa		12.52	□□□□□ -0.41
CLASP2-222	ENST00000494261	SLC4A2	P04920	1241 aa		12.43	□□□□□ -0.42
CLASP2-222	ENST00000494261	MYCN	P04198	464 aa	Predicted RBP	12.4	□□□□□ -0.42
CLASP2-222	ENST00000494261	DCAF8L1	A6NGE4	600 aa		12.39	□□□□□ -0.43
CLASP2-222	ENST00000494261	PLCB2	Q00722	1185 aa		12.19	□□□□□ -0.46
CLASP2-222	ENST00000494261	HAP1	P54257	671 aa	Predicted RBP	12.07	□□□□□ -0.48
CLASP2-222	ENST00000494261	BCAN	Q96GW7	911 aa		12.05	□□□□□ -0.48
CLASP2-222	ENST00000494261	RNF39	Q9H2S5	420 aa		12.05	□□□□□ -0.48
CLASP2-222	ENST00000494261	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12	□□□□□ -0.49
CLASP2-222	ENST00000494261	FBXO3	Q9UK99	471 aa		11.99	□□□□□ -0.49
CLASP2-222	ENST00000494261	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.99	□□□□□ -0.49
CLASP2-222	ENST00000494261	PRKCSH	P14314	528 aa	Predicted RBP	11.97	□□□□□ -0.49
CLASP2-222	ENST00000494261	DCAF8L2	P0C7V8	631 aa		11.92	□□□□□ -0.5
CLASP2-222	ENST00000494261	CACNB1	Q02641	598 aa	Predicted RBP	11.92	□□□□□ -0.5
CLASP2-222	ENST00000494261	TAOK2	Q9UL54	1235 aa		11.92	□□□□□ -0.5
CLASP2-222	ENST00000494261	C1QBP	Q07021	282 aa	Known RBP	11.9	□□□□□ -0.5
CLASP2-222	ENST00000494261	VSIG10	Q8N0Z9	540 aa		11.88	□□□□□ -0.51
CLASP2-222	ENST00000494261	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.86	□□□□□ -0.51
CLASP2-222	ENST00000494261	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.86	□□□□□ -0.51
CLASP2-222	ENST00000494261	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.85	□□□□□ -0.51
CLASP2-222	ENST00000494261	VASP	P50552	380 aa	Predicted RBP	11.78	□□□□□ -0.52
CLASP2-222	ENST00000494261	SPDYE4	A6NLX3	237 aa		11.76	□□□□□ -0.53
CLASP2-222	ENST00000494261		U3KPZ7	1027 aa	Predicted RBP	11.76	□□□□□ -0.53
CLASP2-222	ENST00000494261	TPRN	Q4KMQ1	711 aa		11.75	□□□□□ -0.53
CLASP2-222	ENST00000494261	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.69	□□□□□ -0.54
CLASP2-222	ENST00000494261	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.68	□□□□□ -0.54
CLASP2-222	ENST00000494261	PKD2	Q13563	968 aa		11.65	□□□□□ -0.54
CLASP2-222	ENST00000494261	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.65	□□□□□ -0.54
CLASP2-222	ENST00000494261	PROM2	Q8N271	834 aa		11.64	□□□□□ -0.55
CLASP2-222	ENST00000494261	ABCC9	O60706	1549 aa		11.63	□□□□□ -0.55
CLASP2-222	ENST00000494261	KDM2A	Q9Y2K7	1162 aa		11.62	□□□□□ -0.55
CLASP2-222	ENST00000494261	CCDC180	Q9P1Z9	1646 aa		11.61	□□□□□ -0.55
CLASP2-222	ENST00000494261	BBX	Q8WY36	941 aa	Predicted RBP	11.6	□□□□□ -0.55
CLASP2-222	ENST00000494261	FBLN2	P98095	1184 aa		11.56	□□□□□ -0.56
CLASP2-222	ENST00000494261	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.56	□□□□□ -0.56
CLASP2-222	ENST00000494261	CFAP44	Q96MT7	982 aa		11.53	□□□□□ -0.56
CLASP2-222	ENST00000494261	APLP2	Q06481	763 aa		11.52	□□□□□ -0.57
CLASP2-222	ENST00000494261	MKRN4P	Q13434	485 aa	Predicted RBP	11.51	□□□□□ -0.57
CLASP2-222	ENST00000494261	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.5	□□□□□ -0.57
CLASP2-222	ENST00000494261	CAPN15	O75808	1086 aa		11.48	□□□□□ -0.57
CLASP2-222	ENST00000494261	ECM2	O94769	699 aa	Predicted RBP	11.46	□□□□□ -0.57
CLASP2-222	ENST00000494261	NPM1	P06748	294 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
CLASP2-222	ENST00000494261	KLHL34	Q8N239	644 aa		11.4	□□□□□ -0.58
CLASP2-222	ENST00000494261	SPRYD3	Q8NCJ5	442 aa		11.4	□□□□□ -0.58
CLASP2-222	ENST00000494261	SPOCK2	Q92563	424 aa		11.4	□□□□□ -0.58
CLASP2-222	ENST00000494261	DSG3	P32926	999 aa		11.36	□□□□□ -0.59
CLASP2-222	ENST00000494261	TSHZ2	Q9NRE2	1034 aa		11.36	□□□□□ -0.59
CLASP2-222	ENST00000494261	TRH	P20396	242 aa	Predicted RBP	11.35	□□□□□ -0.59
CLASP2-222	ENST00000494261	TIMELESS	Q9UNS1	1208 aa		11.34	□□□□□ -0.59
CLASP2-222	ENST00000494261	NBR1	Q14596	966 aa		11.33	□□□□□ -0.6
CLASP2-222	ENST00000494261	TULP1	O00294	542 aa	Predicted RBP	11.32	□□□□□ -0.6
CLASP2-222	ENST00000494261	RGL2	O15211	777 aa		11.28	□□□□□ -0.6
CLASP2-222	ENST00000494261	GTF3C3	Q9Y5Q9	886 aa		11.25	□□□□□ -0.61
CLASP2-222	ENST00000494261	DNAJC5	Q9H3Z4	198 aa		11.24	□□□□□ -0.61
CLASP2-222	ENST00000494261	ARX	Q96QS3	562 aa		11.23	□□□□□ -0.61
CLASP2-222	ENST00000494261	ABCB7	O75027	752 aa		11.22	□□□□□ -0.61
CLASP2-222	ENST00000494261	ERICH6	Q7L0X2	663 aa		11.22	□□□□□ -0.61
CLASP2-222	ENST00000494261	DAXX	Q9UER7	740 aa	Predicted RBP	11.21	□□□□□ -0.61
CLASP2-222	ENST00000494261	CHGA	P10645	457 aa	Known RBP	11.2	□□□□□ -0.62
CLASP2-222	ENST00000494261	POLA2	Q14181	598 aa		11.19	□□□□□ -0.62
CLASP2-222	ENST00000494261	PLCD3	Q8N3E9	789 aa		11.16	□□□□□ -0.62
CLASP2-222	ENST00000494261	STAG3	Q9UJ98	1225 aa		11.16	□□□□□ -0.62
CLASP2-222	ENST00000494261	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.09	□□□□□ -0.63
CLASP2-222	ENST00000494261	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.08	□□□□□ -0.64
CLASP2-222	ENST00000494261	MIER1	Q8N108	512 aa		11.06	□□□□□ -0.64
CLASP2-222	ENST00000494261	TMEM132A	Q24JP5	1023 aa		11.04	□□□□□ -0.64
CLASP2-222	ENST00000494261	RB1CC1	Q8TDY2	1594 aa		11.03	□□□□□ -0.64
CLASP2-222	ENST00000494261	NACAD	O15069	1562 aa		11.03	□□□□□ -0.64

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