RNA–Protein interactions for RNA: ENST00000493854.5

RABGAP1-212, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 4

Gene RABGAP1, Length 575 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-212ENST00000493854 CHIC1Q5VXU3 224 aa16.96■□□□□ 0.31
RABGAP1-212ENST00000493854 AEBP2Q6ZN18 517 aaPredicted RBP16.22■□□□□ 0.19
RABGAP1-212ENST00000493854 PHF23Q9BUL5 403 aaPredicted RBP15.01□□□□□ -0.01
RABGAP1-212ENST00000493854 PLPPR3Q6T4P5 718 aa14.28□□□□□ -0.12
RABGAP1-212ENST00000493854 EHMT2Q96KQ7 1210 aa14.1□□□□□ -0.15
RABGAP1-212ENST00000493854 KCNA4P22459 653 aa13.66□□□□□ -0.22
RABGAP1-212ENST00000493854 SENP3Q9H4L4 574 aaPredicted RBP13.62□□□□□ -0.23
RABGAP1-212ENST00000493854 SLC24A1O60721 1099 aa13.58□□□□□ -0.24
RABGAP1-212ENST00000493854 NISCHQ9Y2I1 1504 aa13.51□□□□□ -0.25
RABGAP1-212ENST00000493854 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
RABGAP1-212ENST00000493854 ADRA2BP18089 450 aa13.27□□□□□ -0.29
RABGAP1-212ENST00000493854 SLC4A1APQ9BWU0 796 aaKnown RBP13.23□□□□□ -0.29
RABGAP1-212ENST00000493854 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
RABGAP1-212ENST00000493854 RTN4Q9NQC3 1192 aaKnown RBP12.97□□□□□ -0.33
RABGAP1-212ENST00000493854 PPP6R1Q9UPN7 881 aa12.87□□□□□ -0.35
RABGAP1-212ENST00000493854 NCBP3Q53F19 620 aaKnown RBP12.74□□□□□ -0.37
RABGAP1-212ENST00000493854 PPP4R3CPQ6ZMV5 832 aa12.71□□□□□ -0.37
RABGAP1-212ENST00000493854 ZBTB22O15209 634 aa12.57□□□□□ -0.4
RABGAP1-212ENST00000493854 NPM3O75607 178 aaKnown RBP12.51□□□□□ -0.41
RABGAP1-212ENST00000493854 FOXD1Q16676 465 aa12.48□□□□□ -0.41
RABGAP1-212ENST00000493854 FOXD4L1Q9NU39 408 aa12.28□□□□□ -0.44
RABGAP1-212ENST00000493854 CNKSR2Q8WXI2 1034 aa12.13□□□□□ -0.47
RABGAP1-212ENST00000493854 ABCC9O60706 1549 aa12.11□□□□□ -0.47
RABGAP1-212ENST00000493854 CCDC180Q9P1Z9 1646 aa12.1□□□□□ -0.47
RABGAP1-212ENST00000493854 FKBP8Q14318 412 aa12.08□□□□□ -0.48
RABGAP1-212ENST00000493854 PIAS4Q8N2W9 510 aaPredicted RBP12.05□□□□□ -0.48
RABGAP1-212ENST00000493854 DNAJC5BQ9UF47 199 aa12.04□□□□□ -0.48
RABGAP1-212ENST00000493854 PLCB2Q00722 1185 aa11.92□□□□□ -0.5
RABGAP1-212ENST00000493854 BCANQ96GW7 911 aa11.9□□□□□ -0.5
RABGAP1-212ENST00000493854 SCAF1Q9H7N4 1312 aaKnown RBP11.88□□□□□ -0.51
RABGAP1-212ENST00000493854 PRKCSHP14314 528 aaPredicted RBP11.85□□□□□ -0.51
RABGAP1-212ENST00000493854 ATXN8OSP0DMR3 200 aa11.79□□□□□ -0.52
RABGAP1-212ENST00000493854 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
RABGAP1-212ENST00000493854 HAP1P54257 671 aaPredicted RBP11.74□□□□□ -0.53
RABGAP1-212ENST00000493854 VSIG10Q8N0Z9 540 aa11.64□□□□□ -0.55
RABGAP1-212ENST00000493854 RNF216Q9NWF9 866 aaPredicted RBP11.61□□□□□ -0.55
RABGAP1-212ENST00000493854 DAXXQ9UER7 740 aaPredicted RBP11.6□□□□□ -0.55
RABGAP1-212ENST00000493854 TPRNQ4KMQ1 711 aa11.58□□□□□ -0.56
RABGAP1-212ENST00000493854 MYCNP04198 464 aaPredicted RBP11.56□□□□□ -0.56
RABGAP1-212ENST00000493854 SLC4A2P04920 1241 aa11.53□□□□□ -0.56
RABGAP1-212ENST00000493854 RB1CC1Q8TDY2 1594 aa11.51□□□□□ -0.57
RABGAP1-212ENST00000493854 DCAF8L2P0C7V8 631 aa11.46□□□□□ -0.57
RABGAP1-212ENST00000493854 ARXQ96QS3 562 aa11.46□□□□□ -0.57
RABGAP1-212ENST00000493854 NACADO15069 1562 aa11.44□□□□□ -0.58
RABGAP1-212ENST00000493854 FBXO3Q9UK99 471 aa11.4□□□□□ -0.58
RABGAP1-212ENST00000493854 MAPK8IP2Q13387 824 aaPredicted RBP11.38□□□□□ -0.59
RABGAP1-212ENST00000493854 TIMELESSQ9UNS1 1208 aa11.38□□□□□ -0.59
RABGAP1-212ENST00000493854 ERICH6Q7L0X2 663 aa11.32□□□□□ -0.6
RABGAP1-212ENST00000493854 KDM2AQ9Y2K7 1162 aa11.32□□□□□ -0.6
RABGAP1-212ENST00000493854 TULP1O00294 542 aaPredicted RBP11.31□□□□□ -0.6
RABGAP1-212ENST00000493854 PABPN1Q86U42 306 aaKnown RBP eCLIP11.3□□□□□ -0.6
RABGAP1-212ENST00000493854 UNC13AQ9UPW8 1703 aa11.27□□□□□ -0.61
RABGAP1-212ENST00000493854 HOXD11P31277 338 aaPredicted RBP11.27□□□□□ -0.61
RABGAP1-212ENST00000493854 MYO15BQ96JP2 1530 aa11.26□□□□□ -0.61
RABGAP1-212ENST00000493854 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.25□□□□□ -0.61
RABGAP1-212ENST00000493854 GTF3C3Q9Y5Q9 886 aa11.23□□□□□ -0.61
RABGAP1-212ENST00000493854 FBLN2P98095 1184 aa11.2□□□□□ -0.62
RABGAP1-212ENST00000493854 BBXQ8WY36 941 aaPredicted RBP11.2□□□□□ -0.62
RABGAP1-212ENST00000493854 ZCCHC6Q5VYS8 1495 aaKnown RBP11.19□□□□□ -0.62
RABGAP1-212ENST00000493854 BICRAQ9NZM4 1560 aa11.17□□□□□ -0.62
RABGAP1-212ENST00000493854 VASPP50552 380 aaPredicted RBP11.17□□□□□ -0.62
RABGAP1-212ENST00000493854 PKD2Q13563 968 aa11.16□□□□□ -0.62
RABGAP1-212ENST00000493854 HOMEZQ8IX15 550 aa11.14□□□□□ -0.63
RABGAP1-212ENST00000493854 DCAF1Q9Y4B6 1507 aa11.14□□□□□ -0.63
RABGAP1-212ENST00000493854 PAXIP1Q6ZW49 1069 aaPredicted RBP11.13□□□□□ -0.63
RABGAP1-212ENST00000493854 ATF5Q9Y2D1 282 aaPredicted RBP11.11□□□□□ -0.63
RABGAP1-212ENST00000493854 MSH5O43196 834 aa11.1□□□□□ -0.63
RABGAP1-212ENST00000493854 IFNLR1Q8IU57 520 aaPredicted RBP11.1□□□□□ -0.63
RABGAP1-212ENST00000493854 CFAP44Q96MT7 982 aa11.08□□□□□ -0.64
RABGAP1-212ENST00000493854 SCRIBQ14160 1630 aa11.06□□□□□ -0.64
RABGAP1-212ENST00000493854 DMRT2Q9Y5R5 561 aa11.05□□□□□ -0.64
RABGAP1-212ENST00000493854 SPDYE4A6NLX3 237 aa11.02□□□□□ -0.65
RABGAP1-212ENST00000493854 NBR1Q14596 966 aa11.02□□□□□ -0.65
RABGAP1-212ENST00000493854 PROM2Q8N271 834 aa11.01□□□□□ -0.65
RABGAP1-212ENST00000493854 SHROOM4Q9ULL8 1493 aa11□□□□□ -0.65
RABGAP1-212ENST00000493854 NPM1P06748 294 aaKnown RBP eCLIP10.99□□□□□ -0.65
RABGAP1-212ENST00000493854 TMEM132AQ24JP5 1023 aa10.98□□□□□ -0.65
RABGAP1-212ENST00000493854 SPRYD3Q8NCJ5 442 aa10.98□□□□□ -0.65
RABGAP1-212ENST00000493854 TSHZ2Q9NRE2 1034 aa10.97□□□□□ -0.65
RABGAP1-212ENST00000493854 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.96□□□□□ -0.65
RABGAP1-212ENST00000493854 HNRNPUL2Q1KMD3 747 aaKnown RBP10.96□□□□□ -0.65
RABGAP1-212ENST00000493854 SAMD1Q6SPF0 538 aaPredicted RBP10.96□□□□□ -0.65
RABGAP1-212ENST00000493854 CC2D2AQ9P2K1 1620 aa10.92□□□□□ -0.66
RABGAP1-212ENST00000493854 ECM2O94769 699 aaPredicted RBP10.91□□□□□ -0.66
RABGAP1-212ENST00000493854 EIF4G1Q04637 1599 aaKnown RBP10.9□□□□□ -0.66
RABGAP1-212ENST00000493854 CECR2Q9BXF3 1484 aa10.9□□□□□ -0.66
RABGAP1-212ENST00000493854 C14orf37Q86TY3 774 aa10.89□□□□□ -0.67
RABGAP1-212ENST00000493854 DNAJC5Q9H3Z4 198 aa10.89□□□□□ -0.67
RABGAP1-212ENST00000493854 ZNF219Q9P2Y4 722 aaPredicted RBP10.83□□□□□ -0.68
RABGAP1-212ENST00000493854 SPOCK2Q92563 424 aa10.8□□□□□ -0.68
RABGAP1-212ENST00000493854 RANGAP1P46060 587 aaPredicted RBP10.77□□□□□ -0.69
RABGAP1-212ENST00000493854 RGL2O15211 777 aa10.73□□□□□ -0.69
RABGAP1-212ENST00000493854 KLHL34Q8N239 644 aa10.73□□□□□ -0.69
RABGAP1-212ENST00000493854 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.73□□□□□ -0.692e-7■■■■■ 28.1
RABGAP1-212ENST00000493854 MKRN4PQ13434 485 aaPredicted RBP10.7□□□□□ -0.7
RABGAP1-212ENST00000493854 CHGAP10645 457 aaKnown RBP10.67□□□□□ -0.7
RABGAP1-212ENST00000493854 U3KPZ7 1027 aaPredicted RBP10.66□□□□□ -0.7
RABGAP1-212ENST00000493854 PODXL2Q9NZ53 605 aa10.65□□□□□ -0.7
RABGAP1-212ENST00000493854 APLP2Q06481 763 aa10.6□□□□□ -0.71
RABGAP1-212ENST00000493854 NCAPD3P42695 1498 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms