RNA–Protein interactions for RNA: ENST00000492180.1

TBC1D1-213, Transcript of TBC1 domain family member 1, humanhuman

TSL 2

Gene TBC1D1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-213ENST00000492180 AEBP2Q6ZN18 517 aaPredicted RBP29.35■■■□□ 2.29
TBC1D1-213ENST00000492180 CHIC1Q5VXU3 224 aa28.35■■■□□ 2.13
TBC1D1-213ENST00000492180 PHF23Q9BUL5 403 aaPredicted RBP24.92■■□□□ 1.58
TBC1D1-213ENST00000492180 SENP3Q9H4L4 574 aaPredicted RBP24.91■■□□□ 1.58
TBC1D1-213ENST00000492180 FOXD1Q16676 465 aa23.18■■□□□ 1.3
TBC1D1-213ENST00000492180 PLPPR3Q6T4P5 718 aa22.87■■□□□ 1.25
TBC1D1-213ENST00000492180 PPP6R1Q9UPN7 881 aa22.09■■□□□ 1.13
TBC1D1-213ENST00000492180 ADRA2BP18089 450 aa22.03■■□□□ 1.12
TBC1D1-213ENST00000492180 PIAS4Q8N2W9 510 aaPredicted RBP21.76■■□□□ 1.07
TBC1D1-213ENST00000492180 NISCHQ9Y2I1 1504 aa21.48■■□□□ 1.03
TBC1D1-213ENST00000492180 MSH5O43196 834 aa21.47■■□□□ 1.03
TBC1D1-213ENST00000492180 SCAF1Q9H7N4 1312 aaKnown RBP20.13■□□□□ 0.81
TBC1D1-213ENST00000492180 PPP4R3CPQ6ZMV5 832 aa20.12■□□□□ 0.81
TBC1D1-213ENST00000492180 MAPK8IP2Q13387 824 aaPredicted RBP20.1■□□□□ 0.81
TBC1D1-213ENST00000492180 POTEDQ86YR6 584 aa20.1■□□□□ 0.81
TBC1D1-213ENST00000492180 DMRT2Q9Y5R5 561 aa19.85■□□□□ 0.77
TBC1D1-213ENST00000492180 CNKSR2Q8WXI2 1034 aa19.63■□□□□ 0.73
TBC1D1-213ENST00000492180 NCBP3Q53F19 620 aaKnown RBP19.49■□□□□ 0.71
TBC1D1-213ENST00000492180 HOXD11P31277 338 aaPredicted RBP19.34■□□□□ 0.69
TBC1D1-213ENST00000492180 KCNA4P22459 653 aa19.32■□□□□ 0.68
TBC1D1-213ENST00000492180 RNF216Q9NWF9 866 aaPredicted RBP19.32■□□□□ 0.68
TBC1D1-213ENST00000492180 NPM3O75607 178 aaKnown RBP19.23■□□□□ 0.67
TBC1D1-213ENST00000492180 DCAF8L1A6NGE4 600 aa18.97■□□□□ 0.63
TBC1D1-213ENST00000492180 CCDC180Q9P1Z9 1646 aa18.84■□□□□ 0.61
TBC1D1-213ENST00000492180 DNAJC5BQ9UF47 199 aa18.74■□□□□ 0.59
TBC1D1-213ENST00000492180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.39■□□□□ 0.53
TBC1D1-213ENST00000492180 RNF39Q9H2S5 420 aa18.39■□□□□ 0.53
TBC1D1-213ENST00000492180 SLC4A1APQ9BWU0 796 aaKnown RBP18.32■□□□□ 0.52
TBC1D1-213ENST00000492180 SLC4A2P04920 1241 aa18.25■□□□□ 0.51
TBC1D1-213ENST00000492180 C1QBPQ07021 282 aaKnown RBP18.14■□□□□ 0.49
TBC1D1-213ENST00000492180 CACNB1Q02641 598 aaPredicted RBP18.11■□□□□ 0.49
TBC1D1-213ENST00000492180 U3KPZ7 1027 aaPredicted RBP18.09■□□□□ 0.49
TBC1D1-213ENST00000492180 ZCCHC6Q5VYS8 1495 aaKnown RBP18.01■□□□□ 0.47
TBC1D1-213ENST00000492180 DCAF1Q9Y4B6 1507 aa17.88■□□□□ 0.45
TBC1D1-213ENST00000492180 FOXD4L1Q9NU39 408 aa17.85■□□□□ 0.45
TBC1D1-213ENST00000492180 ZBTB22O15209 634 aa17.78■□□□□ 0.44
TBC1D1-213ENST00000492180 MYCNP04198 464 aaPredicted RBP17.76■□□□□ 0.43
TBC1D1-213ENST00000492180 MYO15BQ96JP2 1530 aa17.74■□□□□ 0.43
TBC1D1-213ENST00000492180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
TBC1D1-213ENST00000492180 HNRNPUL2Q1KMD3 747 aaKnown RBP17.72■□□□□ 0.43
TBC1D1-213ENST00000492180 ABCC9O60706 1549 aa17.71■□□□□ 0.43
TBC1D1-213ENST00000492180 SPINK5Q9NQ38 1064 aaPredicted RBP17.67■□□□□ 0.42
TBC1D1-213ENST00000492180 SAMD1Q6SPF0 538 aaPredicted RBP17.65■□□□□ 0.42
TBC1D1-213ENST00000492180 APLP2Q06481 763 aa17.6■□□□□ 0.41
TBC1D1-213ENST00000492180 CAPN15O75808 1086 aa17.59■□□□□ 0.41
TBC1D1-213ENST00000492180 DCAF8L2P0C7V8 631 aa17.58■□□□□ 0.4
TBC1D1-213ENST00000492180 NACADO15069 1562 aa17.57■□□□□ 0.4
TBC1D1-213ENST00000492180 EHMT2Q96KQ7 1210 aa17.45■□□□□ 0.38
TBC1D1-213ENST00000492180 TRHP20396 242 aaPredicted RBP17.44■□□□□ 0.38
TBC1D1-213ENST00000492180 CSRNP3Q8WYN3 585 aa17.43■□□□□ 0.38
TBC1D1-213ENST00000492180 ZNF219Q9P2Y4 722 aaPredicted RBP17.42■□□□□ 0.38
TBC1D1-213ENST00000492180 RB1CC1Q8TDY2 1594 aa17.4■□□□□ 0.38
TBC1D1-213ENST00000492180 DSG3P32926 999 aa17.4■□□□□ 0.38
TBC1D1-213ENST00000492180 ATF5Q9Y2D1 282 aaPredicted RBP17.34■□□□□ 0.37
TBC1D1-213ENST00000492180 ATXN8OSP0DMR3 200 aa17.26■□□□□ 0.35
TBC1D1-213ENST00000492180 ABCB7O75027 752 aa17.23■□□□□ 0.35
TBC1D1-213ENST00000492180 SHROOM4Q9ULL8 1493 aa17.2■□□□□ 0.34
TBC1D1-213ENST00000492180 SCRIBQ14160 1630 aa17.12■□□□□ 0.33
TBC1D1-213ENST00000492180 POLA2Q14181 598 aa17.1■□□□□ 0.33
TBC1D1-213ENST00000492180 UNC13AQ9UPW8 1703 aa16.99■□□□□ 0.31
TBC1D1-213ENST00000492180 BICRAQ9NZM4 1560 aa16.83■□□□□ 0.28
TBC1D1-213ENST00000492180 ZBTB12Q9Y330 459 aaPredicted RBP16.77■□□□□ 0.28
TBC1D1-213ENST00000492180 PABPN1Q86U42 306 aaKnown RBP eCLIP16.65■□□□□ 0.26
TBC1D1-213ENST00000492180 BAZ1AQ9NRL2 1556 aaPredicted RBP16.61■□□□□ 0.25
TBC1D1-213ENST00000492180 CECR2Q9BXF3 1484 aa16.6■□□□□ 0.25
TBC1D1-213ENST00000492180 RSF1Q96T23 1441 aaPredicted RBP16.59■□□□□ 0.25
TBC1D1-213ENST00000492180 FBLN2P98095 1184 aa16.58■□□□□ 0.24
TBC1D1-213ENST00000492180 SUPT5HO00267 1087 aaKnown RBP16.57■□□□□ 0.24
TBC1D1-213ENST00000492180 MKRN4PQ13434 485 aaPredicted RBP16.56■□□□□ 0.24
TBC1D1-213ENST00000492180 RBM42Q9BTD8 480 aaKnown RBP16.55■□□□□ 0.24
TBC1D1-213ENST00000492180 OSCARQ8IYS5 282 aa16.53■□□□□ 0.24
TBC1D1-213ENST00000492180 MROH2BQ7Z745 1585 aa16.51■□□□□ 0.23
TBC1D1-213ENST00000492180 SMARCA4P51532 1647 aa16.51■□□□□ 0.23
TBC1D1-213ENST00000492180 PEG3Q9GZU2 1588 aa16.4■□□□□ 0.22
TBC1D1-213ENST00000492180 WIZO95785 1651 aa16.36■□□□□ 0.21
TBC1D1-213ENST00000492180 EIF4G1Q04637 1599 aaKnown RBP16.33■□□□□ 0.2
TBC1D1-213ENST00000492180 SMARCA2P51531 1590 aa16.31■□□□□ 0.2
TBC1D1-213ENST00000492180 SPDYE2BA6NHP3 402 aa16.31■□□□□ 0.2
TBC1D1-213ENST00000492180 SPDYE6P0CI01 402 aa16.31■□□□□ 0.2
TBC1D1-213ENST00000492180 SPDYE2Q495Y8 402 aa16.31■□□□□ 0.2
TBC1D1-213ENST00000492180 AKT1S1Q96B36 256 aa16.3■□□□□ 0.2
TBC1D1-213ENST00000492180 ATAD2BQ9ULI0 1458 aa16.27■□□□□ 0.19
TBC1D1-213ENST00000492180 TOP2AP11388 1531 aaKnown RBP16.26■□□□□ 0.19
TBC1D1-213ENST00000492180 NCAPD3P42695 1498 aa16.22■□□□□ 0.19
TBC1D1-213ENST00000492180 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
TBC1D1-213ENST00000492180 HMGXB3Q12766 1538 aa16.18■□□□□ 0.18
TBC1D1-213ENST00000492180 SSUH2Q9Y2M2 353 aa16.17■□□□□ 0.18
TBC1D1-213ENST00000492180 REM2Q8IYK8 340 aaPredicted RBP16.15■□□□□ 0.18
TBC1D1-213ENST00000492180 BAZ1BQ9UIG0 1483 aaKnown RBP16.15■□□□□ 0.18
TBC1D1-213ENST00000492180 CC2D2AQ9P2K1 1620 aa16.09■□□□□ 0.17
TBC1D1-213ENST00000492180 CCDC88BA6NC98 1476 aa16.06■□□□□ 0.16
TBC1D1-213ENST00000492180 SPDYE4A6NLX3 237 aa16.02■□□□□ 0.16
TBC1D1-213ENST00000492180 CHRDL2Q6WN34 429 aa16■□□□□ 0.15
TBC1D1-213ENST00000492180 PITPNM1O00562 1244 aa15.97■□□□□ 0.15
TBC1D1-213ENST00000492180 SPDYE1Q8NFV5 336 aaPredicted RBP15.89■□□□□ 0.13
TBC1D1-213ENST00000492180 POTEHQ6S545 545 aa15.85■□□□□ 0.13
TBC1D1-213ENST00000492180 CLEC11AQ9Y240 323 aa15.84■□□□□ 0.13
TBC1D1-213ENST00000492180 CFTRP13569 1480 aa15.79■□□□□ 0.12
TBC1D1-213ENST00000492180 CADPSQ9ULU8 1353 aa15.75■□□□□ 0.11
TBC1D1-213ENST00000492180 FXR2P51116 673 aaKnown RBP eCLIP15.75■□□□□ 0.115e-6■□□□□ 8.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms