RNA–Protein interactions for RNA: ENST00000492179.1

CCNI2-203, Transcript of cyclin I family member 2, humanhuman

TSL 3

Gene CCNI2, Length 490 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2-203ENST00000492179 AEBP2Q6ZN18 517 aaPredicted RBP26.77■■□□□ 1.88
CCNI2-203ENST00000492179 CHIC1Q5VXU3 224 aa26■■□□□ 1.75
CCNI2-203ENST00000492179 PHF23Q9BUL5 403 aaPredicted RBP22.94■■□□□ 1.26
CCNI2-203ENST00000492179 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
CCNI2-203ENST00000492179 FOXD1Q16676 465 aa21.07■□□□□ 0.96
CCNI2-203ENST00000492179 PLPPR3Q6T4P5 718 aa21.04■□□□□ 0.96
CCNI2-203ENST00000492179 PPP6R1Q9UPN7 881 aa20.27■□□□□ 0.84
CCNI2-203ENST00000492179 ADRA2BP18089 450 aa20.22■□□□□ 0.83
CCNI2-203ENST00000492179 PIAS4Q8N2W9 510 aaPredicted RBP19.8■□□□□ 0.76
CCNI2-203ENST00000492179 MSH5O43196 834 aa19.34■□□□□ 0.69
CCNI2-203ENST00000492179 NISCHQ9Y2I1 1504 aa18.66■□□□□ 0.58
CCNI2-203ENST00000492179 PPP4R3CPQ6ZMV5 832 aa18.57■□□□□ 0.56
CCNI2-203ENST00000492179 POTEDQ86YR6 584 aa18.48■□□□□ 0.55
CCNI2-203ENST00000492179 MAPK8IP2Q13387 824 aaPredicted RBP18.38■□□□□ 0.53
CCNI2-203ENST00000492179 SCAF1Q9H7N4 1312 aaKnown RBP18.34■□□□□ 0.53
CCNI2-203ENST00000492179 KCNA4P22459 653 aa18.12■□□□□ 0.49
CCNI2-203ENST00000492179 DMRT2Q9Y5R5 561 aa18.07■□□□□ 0.48
CCNI2-203ENST00000492179 CNKSR2Q8WXI2 1034 aa18.03■□□□□ 0.48
CCNI2-203ENST00000492179 NCBP3Q53F19 620 aaKnown RBP17.97■□□□□ 0.47
CCNI2-203ENST00000492179 NPM3O75607 178 aaKnown RBP17.83■□□□□ 0.44
CCNI2-203ENST00000492179 RNF216Q9NWF9 866 aaPredicted RBP17.7■□□□□ 0.42
CCNI2-203ENST00000492179 HOXD11P31277 338 aaPredicted RBP17.67■□□□□ 0.42
CCNI2-203ENST00000492179 DNAJC5BQ9UF47 199 aa17.29■□□□□ 0.36
CCNI2-203ENST00000492179 DCAF8L1A6NGE4 600 aa17.24■□□□□ 0.35
CCNI2-203ENST00000492179 SLC4A1APQ9BWU0 796 aaKnown RBP17.17■□□□□ 0.34
CCNI2-203ENST00000492179 SLC4A2P04920 1241 aa16.89■□□□□ 0.29
CCNI2-203ENST00000492179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.79■□□□□ 0.28
CCNI2-203ENST00000492179 ZBTB22O15209 634 aa16.73■□□□□ 0.27
CCNI2-203ENST00000492179 EHMT2Q96KQ7 1210 aa16.65■□□□□ 0.26
CCNI2-203ENST00000492179 RNF39Q9H2S5 420 aa16.64■□□□□ 0.25
CCNI2-203ENST00000492179 FOXD4L1Q9NU39 408 aa16.62■□□□□ 0.25
CCNI2-203ENST00000492179 U3KPZ7 1027 aaPredicted RBP16.59■□□□□ 0.25
CCNI2-203ENST00000492179 CCDC180Q9P1Z9 1646 aa16.57■□□□□ 0.24
CCNI2-203ENST00000492179 CSRNP3Q8WYN3 585 aa16.52■□□□□ 0.24
CCNI2-203ENST00000492179 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
CCNI2-203ENST00000492179 C1QBPQ07021 282 aaKnown RBP16.38■□□□□ 0.21
CCNI2-203ENST00000492179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.22■□□□□ 0.19
CCNI2-203ENST00000492179 HNRNPUL2Q1KMD3 747 aaKnown RBP16.22■□□□□ 0.19
CCNI2-203ENST00000492179 CACNB1Q02641 598 aaPredicted RBP16.2■□□□□ 0.18
CCNI2-203ENST00000492179 SAMD1Q6SPF0 538 aaPredicted RBP16.19■□□□□ 0.18
CCNI2-203ENST00000492179 SPINK5Q9NQ38 1064 aaPredicted RBP16.16■□□□□ 0.18
CCNI2-203ENST00000492179 ATF5Q9Y2D1 282 aaPredicted RBP16.1■□□□□ 0.17
CCNI2-203ENST00000492179 ABCC9O60706 1549 aa16.04■□□□□ 0.16
CCNI2-203ENST00000492179 ATXN8OSP0DMR3 200 aa16.02■□□□□ 0.16
CCNI2-203ENST00000492179 APLP2Q06481 763 aa16.02■□□□□ 0.16
CCNI2-203ENST00000492179 CAPN15O75808 1086 aa16.01■□□□□ 0.15
CCNI2-203ENST00000492179 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
CCNI2-203ENST00000492179 ZNF219Q9P2Y4 722 aaPredicted RBP15.89■□□□□ 0.13
CCNI2-203ENST00000492179 DSG3P32926 999 aa15.82■□□□□ 0.12
CCNI2-203ENST00000492179 ABCB7O75027 752 aa15.76■□□□□ 0.11
CCNI2-203ENST00000492179 POLA2Q14181 598 aa15.69■□□□□ 0.1
CCNI2-203ENST00000492179 ZCCHC6Q5VYS8 1495 aaKnown RBP15.59■□□□□ 0.09
CCNI2-203ENST00000492179 DCAF8L2P0C7V8 631 aa15.52■□□□□ 0.08
CCNI2-203ENST00000492179 NACADO15069 1562 aa15.47■□□□□ 0.07
CCNI2-203ENST00000492179 RB1CC1Q8TDY2 1594 aa15.47■□□□□ 0.07
CCNI2-203ENST00000492179 DCAF1Q9Y4B6 1507 aa15.39■□□□□ 0.05
CCNI2-203ENST00000492179 MKRN4PQ13434 485 aaPredicted RBP15.38■□□□□ 0.05
CCNI2-203ENST00000492179 MYO15BQ96JP2 1530 aa15.37■□□□□ 0.05
CCNI2-203ENST00000492179 UNC13AQ9UPW8 1703 aa15.36■□□□□ 0.05
CCNI2-203ENST00000492179 ZBTB12Q9Y330 459 aaPredicted RBP15.33■□□□□ 0.04
CCNI2-203ENST00000492179 FBLN2P98095 1184 aa15.27■□□□□ 0.04
CCNI2-203ENST00000492179 SCRIBQ14160 1630 aa15.18■□□□□ 0.02
CCNI2-203ENST00000492179 OSCARQ8IYS5 282 aa15.18■□□□□ 0.02
CCNI2-203ENST00000492179 BICRAQ9NZM4 1560 aa15.07■□□□□ 0
CCNI2-203ENST00000492179 PABPN1Q86U42 306 aaKnown RBP eCLIP15□□□□□ -0.01
CCNI2-203ENST00000492179 RBM42Q9BTD8 480 aaKnown RBP14.97□□□□□ -0.01
CCNI2-203ENST00000492179 SPDYE2BA6NHP3 402 aa14.96□□□□□ -0.01
CCNI2-203ENST00000492179 SPDYE6P0CI01 402 aa14.96□□□□□ -0.01
CCNI2-203ENST00000492179 SPDYE2Q495Y8 402 aa14.96□□□□□ -0.01
CCNI2-203ENST00000492179 SPDYE4A6NLX3 237 aa14.92□□□□□ -0.02
CCNI2-203ENST00000492179 SHROOM4Q9ULL8 1493 aa14.91□□□□□ -0.02
CCNI2-203ENST00000492179 ZNF692Q9BU19 519 aaPredicted RBP14.9□□□□□ -0.02
CCNI2-203ENST00000492179 FKBP8Q14318 412 aa14.89□□□□□ -0.03
CCNI2-203ENST00000492179 SSUH2Q9Y2M2 353 aa14.89□□□□□ -0.03
CCNI2-203ENST00000492179 AKT1S1Q96B36 256 aa14.82□□□□□ -0.04
CCNI2-203ENST00000492179 PROM2Q8N271 834 aa14.73□□□□□ -0.05
CCNI2-203ENST00000492179 REM2Q8IYK8 340 aaPredicted RBP14.72□□□□□ -0.05
CCNI2-203ENST00000492179 EIF4G1Q04637 1599 aaKnown RBP14.62□□□□□ -0.07
CCNI2-203ENST00000492179 PITPNM1O00562 1244 aa14.57□□□□□ -0.08
CCNI2-203ENST00000492179 CECR2Q9BXF3 1484 aa14.57□□□□□ -0.08
CCNI2-203ENST00000492179 CC2D2AQ9P2K1 1620 aa14.55□□□□□ -0.08
CCNI2-203ENST00000492179 SPDYE1Q8NFV5 336 aaPredicted RBP14.52□□□□□ -0.09
CCNI2-203ENST00000492179 SMARCA4P51532 1647 aa14.51□□□□□ -0.09
CCNI2-203ENST00000492179 CLEC11AQ9Y240 323 aa14.47□□□□□ -0.09
CCNI2-203ENST00000492179 BAZ1AQ9NRL2 1556 aaPredicted RBP14.44□□□□□ -0.1
CCNI2-203ENST00000492179 CHRDL2Q6WN34 429 aa14.44□□□□□ -0.1
CCNI2-203ENST00000492179 MROH2BQ7Z745 1585 aa14.43□□□□□ -0.1
CCNI2-203ENST00000492179 POTEHQ6S545 545 aa14.42□□□□□ -0.1
CCNI2-203ENST00000492179 STAG3Q9UJ98 1225 aa14.39□□□□□ -0.11
CCNI2-203ENST00000492179 WIZO95785 1651 aa14.36□□□□□ -0.11
CCNI2-203ENST00000492179 PRR29P0C7W0 189 aa14.32□□□□□ -0.12
CCNI2-203ENST00000492179 ATAD2BQ9ULI0 1458 aa14.31□□□□□ -0.12
CCNI2-203ENST00000492179 FXR2P51116 673 aaKnown RBP eCLIP14.3□□□□□ -0.12
CCNI2-203ENST00000492179 SMARCA2P51531 1590 aa14.3□□□□□ -0.12
CCNI2-203ENST00000492179 PEG3Q9GZU2 1588 aa14.3□□□□□ -0.12
CCNI2-203ENST00000492179 FBXO3Q9UK99 471 aa14.29□□□□□ -0.12
CCNI2-203ENST00000492179 PIP4P2Q8N4L2 257 aa14.28□□□□□ -0.12
CCNI2-203ENST00000492179 RSF1Q96T23 1441 aaPredicted RBP14.27□□□□□ -0.12
CCNI2-203ENST00000492179 NCAPD3P42695 1498 aa14.24□□□□□ -0.13
CCNI2-203ENST00000492179 HMGXB3Q12766 1538 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms