RNA–Protein interactions for RNA: ENST00000491919.5

CHEK2-224, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 609 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-224ENST00000491919 AEBP2Q6ZN18 517 aaPredicted RBP26.9■■□□□ 1.9
CHEK2-224ENST00000491919 CHIC1Q5VXU3 224 aa25.39■■□□□ 1.66
CHEK2-224ENST00000491919 SENP3Q9H4L4 574 aaPredicted RBP22.7■■□□□ 1.22
CHEK2-224ENST00000491919 PHF23Q9BUL5 403 aaPredicted RBP22.49■■□□□ 1.19
CHEK2-224ENST00000491919 FOXD1Q16676 465 aa21.32■■□□□ 1
CHEK2-224ENST00000491919 PLPPR3Q6T4P5 718 aa20.16■□□□□ 0.82
CHEK2-224ENST00000491919 PPP6R1Q9UPN7 881 aa20■□□□□ 0.79
CHEK2-224ENST00000491919 ADRA2BP18089 450 aa19.86■□□□□ 0.77
CHEK2-224ENST00000491919 PIAS4Q8N2W9 510 aaPredicted RBP19.8■□□□□ 0.76
CHEK2-224ENST00000491919 MSH5O43196 834 aa19.76■□□□□ 0.75
CHEK2-224ENST00000491919 POTEDQ86YR6 584 aa19.49■□□□□ 0.71
CHEK2-224ENST00000491919 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
CHEK2-224ENST00000491919 DMRT2Q9Y5R5 561 aa18.08■□□□□ 0.48
CHEK2-224ENST00000491919 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
CHEK2-224ENST00000491919 PPP4R3CPQ6ZMV5 832 aa17.74■□□□□ 0.43
CHEK2-224ENST00000491919 HOXD11P31277 338 aaPredicted RBP17.42■□□□□ 0.38
CHEK2-224ENST00000491919 CNKSR2Q8WXI2 1034 aa17.35■□□□□ 0.37
CHEK2-224ENST00000491919 RNF216Q9NWF9 866 aaPredicted RBP17.22■□□□□ 0.35
CHEK2-224ENST00000491919 DCAF8L1A6NGE4 600 aa17.19■□□□□ 0.34
CHEK2-224ENST00000491919 RNF39Q9H2S5 420 aa16.99■□□□□ 0.31
CHEK2-224ENST00000491919 CACNB1Q02641 598 aaPredicted RBP16.97■□□□□ 0.31
CHEK2-224ENST00000491919 NCBP3Q53F19 620 aaKnown RBP16.87■□□□□ 0.29
CHEK2-224ENST00000491919 NPM3O75607 178 aaKnown RBP16.86■□□□□ 0.29
CHEK2-224ENST00000491919 DNAJC5BQ9UF47 199 aa16.74■□□□□ 0.27
CHEK2-224ENST00000491919 C1QBPQ07021 282 aaKnown RBP16.63■□□□□ 0.25
CHEK2-224ENST00000491919 KCNA4P22459 653 aa16.56■□□□□ 0.24
CHEK2-224ENST00000491919 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.45■□□□□ 0.22
CHEK2-224ENST00000491919 U3KPZ7 1027 aaPredicted RBP16.29■□□□□ 0.2
CHEK2-224ENST00000491919 SLC4A2P04920 1241 aa16.19■□□□□ 0.18
CHEK2-224ENST00000491919 SPINK5Q9NQ38 1064 aaPredicted RBP16.07■□□□□ 0.16
CHEK2-224ENST00000491919 DSG3P32926 999 aa15.91■□□□□ 0.14
CHEK2-224ENST00000491919 CAPN15O75808 1086 aa15.87■□□□□ 0.13
CHEK2-224ENST00000491919 TRHP20396 242 aaPredicted RBP15.63■□□□□ 0.09
CHEK2-224ENST00000491919 ABCB7O75027 752 aa15.6■□□□□ 0.09
CHEK2-224ENST00000491919 ZNF219Q9P2Y4 722 aaPredicted RBP15.55■□□□□ 0.08
CHEK2-224ENST00000491919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.54■□□□□ 0.08
CHEK2-224ENST00000491919 HNRNPUL2Q1KMD3 747 aaKnown RBP15.54■□□□□ 0.08
CHEK2-224ENST00000491919 SAMD1Q6SPF0 538 aaPredicted RBP15.52■□□□□ 0.08
CHEK2-224ENST00000491919 SLC4A1APQ9BWU0 796 aaKnown RBP15.5■□□□□ 0.07
CHEK2-224ENST00000491919 MYCNP04198 464 aaPredicted RBP15.48■□□□□ 0.07
CHEK2-224ENST00000491919 APLP2Q06481 763 aa15.48■□□□□ 0.07
CHEK2-224ENST00000491919 ZBTB22O15209 634 aa15.34■□□□□ 0.05
CHEK2-224ENST00000491919 FOXD4L1Q9NU39 408 aa15.34■□□□□ 0.05
CHEK2-224ENST00000491919 ATF5Q9Y2D1 282 aaPredicted RBP15.34■□□□□ 0.05
CHEK2-224ENST00000491919 POLA2Q14181 598 aa15.25■□□□□ 0.03
CHEK2-224ENST00000491919 POTEHQ6S545 545 aa15.2■□□□□ 0.02
CHEK2-224ENST00000491919 RBM42Q9BTD8 480 aaKnown RBP14.99□□□□□ -0.01
CHEK2-224ENST00000491919 OSCARQ8IYS5 282 aa14.82□□□□□ -0.04
CHEK2-224ENST00000491919 ATXN8OSP0DMR3 200 aa14.81□□□□□ -0.04
CHEK2-224ENST00000491919 CHRDL2Q6WN34 429 aa14.79□□□□□ -0.04
CHEK2-224ENST00000491919 ZBTB12Q9Y330 459 aaPredicted RBP14.78□□□□□ -0.04
CHEK2-224ENST00000491919 AKT1S1Q96B36 256 aa14.71□□□□□ -0.05
CHEK2-224ENST00000491919 REM2Q8IYK8 340 aaPredicted RBP14.65□□□□□ -0.06
CHEK2-224ENST00000491919 MKRN4PQ13434 485 aaPredicted RBP14.63□□□□□ -0.07
CHEK2-224ENST00000491919 PITPNM1O00562 1244 aa14.53□□□□□ -0.08
CHEK2-224ENST00000491919 CSRNP3Q8WYN3 585 aa14.53□□□□□ -0.08
CHEK2-224ENST00000491919 PIP4P2Q8N4L2 257 aa14.49□□□□□ -0.09
CHEK2-224ENST00000491919 SPDYE2BA6NHP3 402 aa14.42□□□□□ -0.1
CHEK2-224ENST00000491919 SPDYE6P0CI01 402 aa14.42□□□□□ -0.1
CHEK2-224ENST00000491919 FBLN2P98095 1184 aa14.42□□□□□ -0.1
CHEK2-224ENST00000491919 SPDYE2Q495Y8 402 aa14.42□□□□□ -0.1
CHEK2-224ENST00000491919 FXR2P51116 673 aaKnown RBP eCLIP14.4□□□□□ -0.1
CHEK2-224ENST00000491919 SSUH2Q9Y2M2 353 aa14.35□□□□□ -0.11
CHEK2-224ENST00000491919 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
CHEK2-224ENST00000491919 EHMT2Q96KQ7 1210 aa14.23□□□□□ -0.13
CHEK2-224ENST00000491919 ZNF692Q9BU19 519 aaPredicted RBP14.23□□□□□ -0.13
CHEK2-224ENST00000491919 EVX2Q03828 476 aa14.19□□□□□ -0.14
CHEK2-224ENST00000491919 SPDYE1Q8NFV5 336 aaPredicted RBP14.14□□□□□ -0.15
CHEK2-224ENST00000491919 CLEC11AQ9Y240 323 aa14.12□□□□□ -0.15
CHEK2-224ENST00000491919 HAX1O00165 279 aa14.11□□□□□ -0.15
CHEK2-224ENST00000491919 PRKAR2AP13861 404 aaKnown RBP14.08□□□□□ -0.16
CHEK2-224ENST00000491919 PABPN1Q86U42 306 aaKnown RBP eCLIP14.08□□□□□ -0.16
CHEK2-224ENST00000491919 NISCHQ9Y2I1 1504 aa14.03□□□□□ -0.16
CHEK2-224ENST00000491919 CHADLQ6NUI6 762 aa14□□□□□ -0.17
CHEK2-224ENST00000491919 C19orf67A6NJJ6 358 aa13.93□□□□□ -0.18
CHEK2-224ENST00000491919 PRR29P0C7W0 189 aa13.87□□□□□ -0.19
CHEK2-224ENST00000491919 ABCC9O60706 1549 aa13.77□□□□□ -0.21
CHEK2-224ENST00000491919 SPDYE4A6NLX3 237 aa13.74□□□□□ -0.21
CHEK2-224ENST00000491919 FARP1Q9Y4F1 1045 aaPredicted RBP13.73□□□□□ -0.21
CHEK2-224ENST00000491919 GABBR2O75899 941 aa13.72□□□□□ -0.21
CHEK2-224ENST00000491919 CREBZFQ9NS37 354 aa13.69□□□□□ -0.22
CHEK2-224ENST00000491919 CD44P16070 742 aaKnown RBP13.62□□□□□ -0.23
CHEK2-224ENST00000491919 POTEIP0CG38 1075 aa13.56□□□□□ -0.24
CHEK2-224ENST00000491919 PROM2Q8N271 834 aa13.56□□□□□ -0.24
CHEK2-224ENST00000491919 STAG3Q9UJ98 1225 aa13.54□□□□□ -0.24
CHEK2-224ENST00000491919 MNX1P50219 401 aaPredicted RBP13.53□□□□□ -0.24
CHEK2-224ENST00000491919 ZNF579Q8NAF0 562 aaKnown RBP13.46□□□□□ -0.25
CHEK2-224ENST00000491919 ZRANB1Q9UGI0 708 aa13.41□□□□□ -0.26
CHEK2-224ENST00000491919 GALR2O43603 387 aaPredicted RBP13.35□□□□□ -0.27
CHEK2-224ENST00000491919 LHX8Q68G74 356 aa13.33□□□□□ -0.28
CHEK2-224ENST00000491919 PHF12Q96QT6 1004 aa13.33□□□□□ -0.28
CHEK2-224ENST00000491919 CLCN6P51797 869 aa13.28□□□□□ -0.28
CHEK2-224ENST00000491919 NPM1P06748 294 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHEK2-224ENST00000491919 DCBLD2Q96PD2 775 aa13.2□□□□□ -0.3
CHEK2-224ENST00000491919 PELP1Q8IZL8 1130 aaKnown RBP13.16□□□□□ -0.3
CHEK2-224ENST00000491919 PAK3O75914 559 aaPredicted RBP13.14□□□□□ -0.31
CHEK2-224ENST00000491919 MS4A3Q96HJ5 214 aa13.14□□□□□ -0.31
CHEK2-224ENST00000491919 POTEB2H3BUK9 544 aa13.13□□□□□ -0.31
CHEK2-224ENST00000491919 CCDC61Q9Y6R9 512 aa13.13□□□□□ -0.31
CHEK2-224ENST00000491919 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms