RNA–Protein interactions for RNA: ENST00000490669.1

JMJD1C-208, Transcript of jumonji domain containing 1C, humanhuman

TSL 2

Gene JMJD1C, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JMJD1C-208ENST00000490669 AEBP2Q6ZN18 517 aaPredicted RBP26.18■■□□□ 1.78
JMJD1C-208ENST00000490669 CHIC1Q5VXU3 224 aa24.94■■□□□ 1.58
JMJD1C-208ENST00000490669 SENP3Q9H4L4 574 aaPredicted RBP22.34■■□□□ 1.17
JMJD1C-208ENST00000490669 PHF23Q9BUL5 403 aaPredicted RBP22.06■■□□□ 1.12
JMJD1C-208ENST00000490669 FOXD1Q16676 465 aa20.8■□□□□ 0.92
JMJD1C-208ENST00000490669 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
JMJD1C-208ENST00000490669 PPP6R1Q9UPN7 881 aa19.5■□□□□ 0.71
JMJD1C-208ENST00000490669 PIAS4Q8N2W9 510 aaPredicted RBP19.48■□□□□ 0.71
JMJD1C-208ENST00000490669 MSH5O43196 834 aa19.46■□□□□ 0.71
JMJD1C-208ENST00000490669 ADRA2BP18089 450 aa19.45■□□□□ 0.7
JMJD1C-208ENST00000490669 POTEDQ86YR6 584 aa18.86■□□□□ 0.61
JMJD1C-208ENST00000490669 MAPK8IP2Q13387 824 aaPredicted RBP17.84■□□□□ 0.45
JMJD1C-208ENST00000490669 SCAF1Q9H7N4 1312 aaKnown RBP17.81■□□□□ 0.44
JMJD1C-208ENST00000490669 DMRT2Q9Y5R5 561 aa17.72■□□□□ 0.43
JMJD1C-208ENST00000490669 PPP4R3CPQ6ZMV5 832 aa17.51■□□□□ 0.39
JMJD1C-208ENST00000490669 CNKSR2Q8WXI2 1034 aa17.16■□□□□ 0.34
JMJD1C-208ENST00000490669 HOXD11P31277 338 aaPredicted RBP17.09■□□□□ 0.33
JMJD1C-208ENST00000490669 DCAF8L1A6NGE4 600 aa17.02■□□□□ 0.32
JMJD1C-208ENST00000490669 RNF216Q9NWF9 866 aaPredicted RBP16.99■□□□□ 0.31
JMJD1C-208ENST00000490669 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
JMJD1C-208ENST00000490669 CACNB1Q02641 598 aaPredicted RBP16.66■□□□□ 0.26
JMJD1C-208ENST00000490669 NPM3O75607 178 aaKnown RBP16.61■□□□□ 0.25
JMJD1C-208ENST00000490669 RNF39Q9H2S5 420 aa16.6■□□□□ 0.25
JMJD1C-208ENST00000490669 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
JMJD1C-208ENST00000490669 C1QBPQ07021 282 aaKnown RBP16.37■□□□□ 0.21
JMJD1C-208ENST00000490669 KCNA4P22459 653 aa16.36■□□□□ 0.21
JMJD1C-208ENST00000490669 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.31■□□□□ 0.2
JMJD1C-208ENST00000490669 U3KPZ7 1027 aaPredicted RBP15.96■□□□□ 0.15
JMJD1C-208ENST00000490669 SLC4A2P04920 1241 aa15.84■□□□□ 0.13
JMJD1C-208ENST00000490669 SPINK5Q9NQ38 1064 aaPredicted RBP15.71■□□□□ 0.11
JMJD1C-208ENST00000490669 CAPN15O75808 1086 aa15.7■□□□□ 0.1
JMJD1C-208ENST00000490669 DSG3P32926 999 aa15.57■□□□□ 0.08
JMJD1C-208ENST00000490669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.55■□□□□ 0.08
JMJD1C-208ENST00000490669 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
JMJD1C-208ENST00000490669 APLP2Q06481 763 aa15.54■□□□□ 0.08
JMJD1C-208ENST00000490669 TRHP20396 242 aaPredicted RBP15.46■□□□□ 0.07
JMJD1C-208ENST00000490669 SAMD1Q6SPF0 538 aaPredicted RBP15.46■□□□□ 0.07
JMJD1C-208ENST00000490669 SLC4A1APQ9BWU0 796 aaKnown RBP15.46■□□□□ 0.07
JMJD1C-208ENST00000490669 ZNF219Q9P2Y4 722 aaPredicted RBP15.43■□□□□ 0.06
JMJD1C-208ENST00000490669 MYCNP04198 464 aaPredicted RBP15.37■□□□□ 0.05
JMJD1C-208ENST00000490669 ABCB7O75027 752 aa15.33■□□□□ 0.04
JMJD1C-208ENST00000490669 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
JMJD1C-208ENST00000490669 POLA2Q14181 598 aa15.05■□□□□ -0
JMJD1C-208ENST00000490669 ZBTB22O15209 634 aa15.03■□□□□ -0
JMJD1C-208ENST00000490669 ATF5Q9Y2D1 282 aaPredicted RBP14.99□□□□□ -0.01
JMJD1C-208ENST00000490669 RBM42Q9BTD8 480 aaKnown RBP14.87□□□□□ -0.03
JMJD1C-208ENST00000490669 NISCHQ9Y2I1 1504 aa14.86□□□□□ -0.03
JMJD1C-208ENST00000490669 POTEHQ6S545 545 aa14.8□□□□□ -0.04
JMJD1C-208ENST00000490669 ATXN8OSP0DMR3 200 aa14.76□□□□□ -0.05
JMJD1C-208ENST00000490669 ZBTB12Q9Y330 459 aaPredicted RBP14.76□□□□□ -0.05
JMJD1C-208ENST00000490669 OSCARQ8IYS5 282 aa14.58□□□□□ -0.08
JMJD1C-208ENST00000490669 AKT1S1Q96B36 256 aa14.53□□□□□ -0.08
JMJD1C-208ENST00000490669 CHRDL2Q6WN34 429 aa14.51□□□□□ -0.09
JMJD1C-208ENST00000490669 FBLN2P98095 1184 aa14.43□□□□□ -0.1
JMJD1C-208ENST00000490669 CSRNP3Q8WYN3 585 aa14.41□□□□□ -0.1
JMJD1C-208ENST00000490669 REM2Q8IYK8 340 aaPredicted RBP14.39□□□□□ -0.11
JMJD1C-208ENST00000490669 MKRN4PQ13434 485 aaPredicted RBP14.31□□□□□ -0.12
JMJD1C-208ENST00000490669 SPDYE2BA6NHP3 402 aa14.3□□□□□ -0.12
JMJD1C-208ENST00000490669 SPDYE6P0CI01 402 aa14.3□□□□□ -0.12
JMJD1C-208ENST00000490669 SPDYE2Q495Y8 402 aa14.3□□□□□ -0.12
JMJD1C-208ENST00000490669 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
JMJD1C-208ENST00000490669 PITPNM1O00562 1244 aa14.24□□□□□ -0.13
JMJD1C-208ENST00000490669 PIP4P2Q8N4L2 257 aa14.17□□□□□ -0.14
JMJD1C-208ENST00000490669 ZNF692Q9BU19 519 aaPredicted RBP14.15□□□□□ -0.14
JMJD1C-208ENST00000490669 SSUH2Q9Y2M2 353 aa14.11□□□□□ -0.15
JMJD1C-208ENST00000490669 FXR2P51116 673 aaKnown RBP eCLIP14.1□□□□□ -0.151e-6■□□□□ 11
JMJD1C-208ENST00000490669 SPDYE1Q8NFV5 336 aaPredicted RBP14.04□□□□□ -0.16
JMJD1C-208ENST00000490669 CLEC11AQ9Y240 323 aa14.03□□□□□ -0.16
JMJD1C-208ENST00000490669 PABPN1Q86U42 306 aaKnown RBP eCLIP13.94□□□□□ -0.18
JMJD1C-208ENST00000490669 HAX1O00165 279 aa13.91□□□□□ -0.18
JMJD1C-208ENST00000490669 SP7Q8TDD2 431 aaPredicted RBP13.91□□□□□ -0.18
JMJD1C-208ENST00000490669 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
JMJD1C-208ENST00000490669 PRR29P0C7W0 189 aa13.8□□□□□ -0.2
JMJD1C-208ENST00000490669 CHADLQ6NUI6 762 aa13.74□□□□□ -0.21
JMJD1C-208ENST00000490669 EVX2Q03828 476 aa13.72□□□□□ -0.21
JMJD1C-208ENST00000490669 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
JMJD1C-208ENST00000490669 C19orf67A6NJJ6 358 aa13.64□□□□□ -0.23
JMJD1C-208ENST00000490669 STAG3Q9UJ98 1225 aa13.58□□□□□ -0.24
JMJD1C-208ENST00000490669 FARP1Q9Y4F1 1045 aaPredicted RBP13.54□□□□□ -0.24
JMJD1C-208ENST00000490669 CD44P16070 742 aaKnown RBP13.45□□□□□ -0.26
JMJD1C-208ENST00000490669 CREBZFQ9NS37 354 aa13.45□□□□□ -0.26
JMJD1C-208ENST00000490669 CCDC180Q9P1Z9 1646 aa13.42□□□□□ -0.26
JMJD1C-208ENST00000490669 GABBR2O75899 941 aa13.42□□□□□ -0.26
JMJD1C-208ENST00000490669 PROM2Q8N271 834 aa13.34□□□□□ -0.27
JMJD1C-208ENST00000490669 ZRANB1Q9UGI0 708 aa13.27□□□□□ -0.29
JMJD1C-208ENST00000490669 CLCN6P51797 869 aa13.24□□□□□ -0.29
JMJD1C-208ENST00000490669 ZNF579Q8NAF0 562 aaKnown RBP13.24□□□□□ -0.29
JMJD1C-208ENST00000490669 NPM1P06748 294 aaKnown RBP eCLIP13.23□□□□□ -0.29
JMJD1C-208ENST00000490669 MNX1P50219 401 aaPredicted RBP13.22□□□□□ -0.29
JMJD1C-208ENST00000490669 PAK3O75914 559 aaPredicted RBP13.19□□□□□ -0.3
JMJD1C-208ENST00000490669 ABCC9O60706 1549 aa13.15□□□□□ -0.3
JMJD1C-208ENST00000490669 POTEIP0CG38 1075 aa13.13□□□□□ -0.31
JMJD1C-208ENST00000490669 DCBLD2Q96PD2 775 aa13.1□□□□□ -0.31
JMJD1C-208ENST00000490669 PHF12Q96QT6 1004 aa13.09□□□□□ -0.31
JMJD1C-208ENST00000490669 FKBP8Q14318 412 aa13.08□□□□□ -0.32
JMJD1C-208ENST00000490669 GALR2O43603 387 aaPredicted RBP13.07□□□□□ -0.32
JMJD1C-208ENST00000490669 PLEKHG5O94827 1062 aa13.06□□□□□ -0.32
JMJD1C-208ENST00000490669 MIER1Q8N108 512 aa13.06□□□□□ -0.32
JMJD1C-208ENST00000490669 LHX8Q68G74 356 aa13.05□□□□□ -0.32
JMJD1C-208ENST00000490669 TSPYL2Q9H2G4 693 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms