RNA–Protein interactions for RNA: ENST00000490550.1

KIFAP3-205, Transcript of kinesin associated protein 3, humanhuman

TSL 5

Gene KIFAP3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFAP3-205ENST00000490550 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
KIFAP3-205ENST00000490550 CHIC1Q5VXU3 224 aa22.03■■□□□ 1.12
KIFAP3-205ENST00000490550 SENP3Q9H4L4 574 aaPredicted RBP19.88■□□□□ 0.77
KIFAP3-205ENST00000490550 PHF23Q9BUL5 403 aaPredicted RBP19.68■□□□□ 0.74
KIFAP3-205ENST00000490550 FOXD1Q16676 465 aa18.65■□□□□ 0.58
KIFAP3-205ENST00000490550 PLPPR3Q6T4P5 718 aa17.5■□□□□ 0.39
KIFAP3-205ENST00000490550 MSH5O43196 834 aa17.39■□□□□ 0.37
KIFAP3-205ENST00000490550 PIAS4Q8N2W9 510 aaPredicted RBP17.37■□□□□ 0.37
KIFAP3-205ENST00000490550 PPP6R1Q9UPN7 881 aa17.37■□□□□ 0.37
KIFAP3-205ENST00000490550 POTEDQ86YR6 584 aa17.33■□□□□ 0.36
KIFAP3-205ENST00000490550 ADRA2BP18089 450 aa17.3■□□□□ 0.36
KIFAP3-205ENST00000490550 MAPK8IP2Q13387 824 aaPredicted RBP15.97■□□□□ 0.15
KIFAP3-205ENST00000490550 DMRT2Q9Y5R5 561 aa15.76■□□□□ 0.11
KIFAP3-205ENST00000490550 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
KIFAP3-205ENST00000490550 PPP4R3CPQ6ZMV5 832 aa15.38■□□□□ 0.05
KIFAP3-205ENST00000490550 DCAF8L1A6NGE4 600 aa15.22■□□□□ 0.03
KIFAP3-205ENST00000490550 HOXD11P31277 338 aaPredicted RBP15.12■□□□□ 0.01
KIFAP3-205ENST00000490550 CACNB1Q02641 598 aaPredicted RBP15.09■□□□□ 0.01
KIFAP3-205ENST00000490550 CNKSR2Q8WXI2 1034 aa15.07■□□□□ 0
KIFAP3-205ENST00000490550 RNF216Q9NWF9 866 aaPredicted RBP14.96□□□□□ -0.01
KIFAP3-205ENST00000490550 RNF39Q9H2S5 420 aa14.88□□□□□ -0.03
KIFAP3-205ENST00000490550 NCBP3Q53F19 620 aaKnown RBP14.65□□□□□ -0.06
KIFAP3-205ENST00000490550 C1QBPQ07021 282 aaKnown RBP14.6□□□□□ -0.07
KIFAP3-205ENST00000490550 NPM3O75607 178 aaKnown RBP14.54□□□□□ -0.08
KIFAP3-205ENST00000490550 DNAJC5BQ9UF47 199 aa14.51□□□□□ -0.09
KIFAP3-205ENST00000490550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.44□□□□□ -0.1
KIFAP3-205ENST00000490550 KCNA4P22459 653 aa14.17□□□□□ -0.14
KIFAP3-205ENST00000490550 U3KPZ7 1027 aaPredicted RBP14.15□□□□□ -0.14
KIFAP3-205ENST00000490550 NISCHQ9Y2I1 1504 aa14.07□□□□□ -0.16
KIFAP3-205ENST00000490550 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
KIFAP3-205ENST00000490550 CAPN15O75808 1086 aa13.97□□□□□ -0.17
KIFAP3-205ENST00000490550 SLC4A2P04920 1241 aa13.95□□□□□ -0.18
KIFAP3-205ENST00000490550 DSG3P32926 999 aa13.91□□□□□ -0.18
KIFAP3-205ENST00000490550 TRHP20396 242 aaPredicted RBP13.74□□□□□ -0.21
KIFAP3-205ENST00000490550 ABCB7O75027 752 aa13.69□□□□□ -0.22
KIFAP3-205ENST00000490550 ZNF219Q9P2Y4 722 aaPredicted RBP13.59□□□□□ -0.23
KIFAP3-205ENST00000490550 EHMT2Q96KQ7 1210 aa13.58□□□□□ -0.24
KIFAP3-205ENST00000490550 APLP2Q06481 763 aa13.57□□□□□ -0.24
KIFAP3-205ENST00000490550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
KIFAP3-205ENST00000490550 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
KIFAP3-205ENST00000490550 POTEHQ6S545 545 aa13.53□□□□□ -0.24
KIFAP3-205ENST00000490550 SLC4A1APQ9BWU0 796 aaKnown RBP13.52□□□□□ -0.25
KIFAP3-205ENST00000490550 SAMD1Q6SPF0 538 aaPredicted RBP13.51□□□□□ -0.25
KIFAP3-205ENST00000490550 MYCNP04198 464 aaPredicted RBP13.38□□□□□ -0.27
KIFAP3-205ENST00000490550 POLA2Q14181 598 aa13.32□□□□□ -0.28
KIFAP3-205ENST00000490550 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
KIFAP3-205ENST00000490550 ATF5Q9Y2D1 282 aaPredicted RBP13.23□□□□□ -0.29
KIFAP3-205ENST00000490550 FOXD4L1Q9NU39 408 aa13.19□□□□□ -0.3
KIFAP3-205ENST00000490550 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
KIFAP3-205ENST00000490550 ZBTB22O15209 634 aa13.05□□□□□ -0.32
KIFAP3-205ENST00000490550 CHRDL2Q6WN34 429 aa13.03□□□□□ -0.32
KIFAP3-205ENST00000490550 OSCARQ8IYS5 282 aa12.91□□□□□ -0.34
KIFAP3-205ENST00000490550 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
KIFAP3-205ENST00000490550 AKT1S1Q96B36 256 aa12.88□□□□□ -0.35
KIFAP3-205ENST00000490550 REM2Q8IYK8 340 aaPredicted RBP12.81□□□□□ -0.36
KIFAP3-205ENST00000490550 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
KIFAP3-205ENST00000490550 PIP4P2Q8N4L2 257 aa12.71□□□□□ -0.37
KIFAP3-205ENST00000490550 PITPNM1O00562 1244 aa12.7□□□□□ -0.38
KIFAP3-205ENST00000490550 ABCC9O60706 1549 aa12.62□□□□□ -0.39
KIFAP3-205ENST00000490550 CCDC180Q9P1Z9 1646 aa12.61□□□□□ -0.39
KIFAP3-205ENST00000490550 SP7Q8TDD2 431 aaPredicted RBP12.6□□□□□ -0.39
KIFAP3-205ENST00000490550 FXR2P51116 673 aaKnown RBP eCLIP12.58□□□□□ -0.4
KIFAP3-205ENST00000490550 FBLN2P98095 1184 aa12.58□□□□□ -0.4
KIFAP3-205ENST00000490550 MKRN4PQ13434 485 aaPredicted RBP12.57□□□□□ -0.4
KIFAP3-205ENST00000490550 SPDYE2BA6NHP3 402 aa12.53□□□□□ -0.4
KIFAP3-205ENST00000490550 HAX1O00165 279 aa12.53□□□□□ -0.4
KIFAP3-205ENST00000490550 SPDYE6P0CI01 402 aa12.53□□□□□ -0.4
KIFAP3-205ENST00000490550 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
KIFAP3-205ENST00000490550 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
KIFAP3-205ENST00000490550 EVX2Q03828 476 aa12.43□□□□□ -0.42
KIFAP3-205ENST00000490550 ZNF692Q9BU19 519 aaPredicted RBP12.42□□□□□ -0.42
KIFAP3-205ENST00000490550 SSUH2Q9Y2M2 353 aa12.38□□□□□ -0.43
KIFAP3-205ENST00000490550 SPDYE1Q8NFV5 336 aaPredicted RBP12.37□□□□□ -0.43
KIFAP3-205ENST00000490550 PRKAR2AP13861 404 aaKnown RBP12.36□□□□□ -0.43
KIFAP3-205ENST00000490550 CHADLQ6NUI6 762 aa12.26□□□□□ -0.45
KIFAP3-205ENST00000490550 PABPN1Q86U42 306 aaKnown RBP eCLIP12.26□□□□□ -0.45
KIFAP3-205ENST00000490550 C19orf67A6NJJ6 358 aa12.18□□□□□ -0.46
KIFAP3-205ENST00000490550 PRR29P0C7W0 189 aa12.16□□□□□ -0.46
KIFAP3-205ENST00000490550 GABBR2O75899 941 aa12.08□□□□□ -0.48
KIFAP3-205ENST00000490550 RB1CC1Q8TDY2 1594 aa12.05□□□□□ -0.48
KIFAP3-205ENST00000490550 NACADO15069 1562 aa11.99□□□□□ -0.49
KIFAP3-205ENST00000490550 FARP1Q9Y4F1 1045 aaPredicted RBP11.98□□□□□ -0.49
KIFAP3-205ENST00000490550 FKBP8Q14318 412 aa11.96□□□□□ -0.49
KIFAP3-205ENST00000490550 CD44P16070 742 aaKnown RBP11.95□□□□□ -0.5
KIFAP3-205ENST00000490550 DCAF8L2P0C7V8 631 aa11.92□□□□□ -0.5
KIFAP3-205ENST00000490550 SPDYE4A6NLX3 237 aa11.86□□□□□ -0.51
KIFAP3-205ENST00000490550 POTEIP0CG38 1075 aa11.86□□□□□ -0.51
KIFAP3-205ENST00000490550 MYO15BQ96JP2 1530 aa11.86□□□□□ -0.51
KIFAP3-205ENST00000490550 CREBZFQ9NS37 354 aa11.85□□□□□ -0.51
KIFAP3-205ENST00000490550 LHX8Q68G74 356 aa11.83□□□□□ -0.52
KIFAP3-205ENST00000490550 ZRANB1Q9UGI0 708 aa11.78□□□□□ -0.52
KIFAP3-205ENST00000490550 STAG3Q9UJ98 1225 aa11.78□□□□□ -0.52
KIFAP3-205ENST00000490550 ZNF579Q8NAF0 562 aaKnown RBP11.72□□□□□ -0.53
KIFAP3-205ENST00000490550 DCBLD2Q96PD2 775 aa11.69□□□□□ -0.54
KIFAP3-205ENST00000490550 DCAF1Q9Y4B6 1507 aa11.67□□□□□ -0.54
KIFAP3-205ENST00000490550 GALR2O43603 387 aaPredicted RBP11.67□□□□□ -0.54
KIFAP3-205ENST00000490550 CLCN6P51797 869 aa11.65□□□□□ -0.54
KIFAP3-205ENST00000490550 UNC13AQ9UPW8 1703 aa11.64□□□□□ -0.55
KIFAP3-205ENST00000490550 PHF12Q96QT6 1004 aa11.64□□□□□ -0.55
KIFAP3-205ENST00000490550 BICRAQ9NZM4 1560 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms