RNA–Protein interactions for RNA: ENST00000489169.1

CACUL1-204, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-204ENST00000489169 AEBP2Q6ZN18 517 aaPredicted RBP28.15■■■□□ 2.1
CACUL1-204ENST00000489169 CHIC1Q5VXU3 224 aa26.79■■□□□ 1.88
CACUL1-204ENST00000489169 SENP3Q9H4L4 574 aaPredicted RBP24■■□□□ 1.43
CACUL1-204ENST00000489169 PHF23Q9BUL5 403 aaPredicted RBP23.67■■□□□ 1.38
CACUL1-204ENST00000489169 FOXD1Q16676 465 aa22.35■■□□□ 1.17
CACUL1-204ENST00000489169 PLPPR3Q6T4P5 718 aa21.42■■□□□ 1.02
CACUL1-204ENST00000489169 PPP6R1Q9UPN7 881 aa20.94■□□□□ 0.94
CACUL1-204ENST00000489169 MSH5O43196 834 aa20.9■□□□□ 0.94
CACUL1-204ENST00000489169 PIAS4Q8N2W9 510 aaPredicted RBP20.86■□□□□ 0.93
CACUL1-204ENST00000489169 ADRA2BP18089 450 aa20.85■□□□□ 0.93
CACUL1-204ENST00000489169 POTEDQ86YR6 584 aa20.27■□□□□ 0.84
CACUL1-204ENST00000489169 MAPK8IP2Q13387 824 aaPredicted RBP19.13■□□□□ 0.65
CACUL1-204ENST00000489169 SCAF1Q9H7N4 1312 aaKnown RBP19.09■□□□□ 0.65
CACUL1-204ENST00000489169 DMRT2Q9Y5R5 561 aa19.05■□□□□ 0.64
CACUL1-204ENST00000489169 PPP4R3CPQ6ZMV5 832 aa18.76■□□□□ 0.59
CACUL1-204ENST00000489169 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
CACUL1-204ENST00000489169 HOXD11P31277 338 aaPredicted RBP18.4■□□□□ 0.54
CACUL1-204ENST00000489169 RNF216Q9NWF9 866 aaPredicted RBP18.26■□□□□ 0.51
CACUL1-204ENST00000489169 DCAF8L1A6NGE4 600 aa18.14■□□□□ 0.49
CACUL1-204ENST00000489169 NCBP3Q53F19 620 aaKnown RBP18.06■□□□□ 0.48
CACUL1-204ENST00000489169 RNF39Q9H2S5 420 aa17.86■□□□□ 0.45
CACUL1-204ENST00000489169 CACNB1Q02641 598 aaPredicted RBP17.83■□□□□ 0.44
CACUL1-204ENST00000489169 NPM3O75607 178 aaKnown RBP17.82■□□□□ 0.44
CACUL1-204ENST00000489169 DNAJC5BQ9UF47 199 aa17.81■□□□□ 0.44
CACUL1-204ENST00000489169 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
CACUL1-204ENST00000489169 KCNA4P22459 653 aa17.52■□□□□ 0.4
CACUL1-204ENST00000489169 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.38
CACUL1-204ENST00000489169 U3KPZ7 1027 aaPredicted RBP17.14■□□□□ 0.33
CACUL1-204ENST00000489169 SLC4A2P04920 1241 aa17.03■□□□□ 0.32
CACUL1-204ENST00000489169 SPINK5Q9NQ38 1064 aaPredicted RBP16.84■□□□□ 0.29
CACUL1-204ENST00000489169 CAPN15O75808 1086 aa16.77■□□□□ 0.28
CACUL1-204ENST00000489169 DSG3P32926 999 aa16.72■□□□□ 0.27
CACUL1-204ENST00000489169 NISCHQ9Y2I1 1504 aa16.71■□□□□ 0.27
CACUL1-204ENST00000489169 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.66■□□□□ 0.26
CACUL1-204ENST00000489169 HNRNPUL2Q1KMD3 747 aaKnown RBP16.66■□□□□ 0.26
CACUL1-204ENST00000489169 APLP2Q06481 763 aa16.64■□□□□ 0.25
CACUL1-204ENST00000489169 SAMD1Q6SPF0 538 aaPredicted RBP16.57■□□□□ 0.24
CACUL1-204ENST00000489169 ZNF219Q9P2Y4 722 aaPredicted RBP16.55■□□□□ 0.24
CACUL1-204ENST00000489169 SLC4A1APQ9BWU0 796 aaKnown RBP16.54■□□□□ 0.24
CACUL1-204ENST00000489169 TRHP20396 242 aaPredicted RBP16.51■□□□□ 0.23
CACUL1-204ENST00000489169 MYCNP04198 464 aaPredicted RBP16.48■□□□□ 0.23
CACUL1-204ENST00000489169 ABCB7O75027 752 aa16.38■□□□□ 0.21
CACUL1-204ENST00000489169 FOXD4L1Q9NU39 408 aa16.34■□□□□ 0.21
CACUL1-204ENST00000489169 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
CACUL1-204ENST00000489169 ZBTB22O15209 634 aa16.13■□□□□ 0.17
CACUL1-204ENST00000489169 POLA2Q14181 598 aa16.12■□□□□ 0.17
CACUL1-204ENST00000489169 ATF5Q9Y2D1 282 aaPredicted RBP16.09■□□□□ 0.17
CACUL1-204ENST00000489169 RBM42Q9BTD8 480 aaKnown RBP15.95■□□□□ 0.14
CACUL1-204ENST00000489169 POTEHQ6S545 545 aa15.89■□□□□ 0.13
CACUL1-204ENST00000489169 ATXN8OSP0DMR3 200 aa15.87■□□□□ 0.13
CACUL1-204ENST00000489169 ZBTB12Q9Y330 459 aaPredicted RBP15.83■□□□□ 0.12
CACUL1-204ENST00000489169 CSRNP3Q8WYN3 585 aa15.74■□□□□ 0.11
CACUL1-204ENST00000489169 AKT1S1Q96B36 256 aa15.61■□□□□ 0.09
CACUL1-204ENST00000489169 OSCARQ8IYS5 282 aa15.6■□□□□ 0.09
CACUL1-204ENST00000489169 CHRDL2Q6WN34 429 aa15.56■□□□□ 0.08
CACUL1-204ENST00000489169 REM2Q8IYK8 340 aaPredicted RBP15.44■□□□□ 0.06
CACUL1-204ENST00000489169 FBLN2P98095 1184 aa15.43■□□□□ 0.06
CACUL1-204ENST00000489169 MKRN4PQ13434 485 aaPredicted RBP15.37■□□□□ 0.05
CACUL1-204ENST00000489169 SPDYE2BA6NHP3 402 aa15.35■□□□□ 0.05
CACUL1-204ENST00000489169 SPDYE6P0CI01 402 aa15.35■□□□□ 0.05
CACUL1-204ENST00000489169 SPDYE2Q495Y8 402 aa15.35■□□□□ 0.05
CACUL1-204ENST00000489169 PITPNM1O00562 1244 aa15.28■□□□□ 0.04
CACUL1-204ENST00000489169 PIP4P2Q8N4L2 257 aa15.21■□□□□ 0.03
CACUL1-204ENST00000489169 SSUH2Q9Y2M2 353 aa15.18■□□□□ 0.02
CACUL1-204ENST00000489169 FXR2P51116 673 aaKnown RBP eCLIP15.17■□□□□ 0.02
CACUL1-204ENST00000489169 ZNF692Q9BU19 519 aaPredicted RBP15.13■□□□□ 0.01
CACUL1-204ENST00000489169 SPDYE1Q8NFV5 336 aaPredicted RBP15.05■□□□□ -0
CACUL1-204ENST00000489169 DNAJC5Q9H3Z4 198 aa15□□□□□ -0.01
CACUL1-204ENST00000489169 CLEC11AQ9Y240 323 aa14.95□□□□□ -0.02
CACUL1-204ENST00000489169 SP7Q8TDD2 431 aaPredicted RBP14.93□□□□□ -0.02
CACUL1-204ENST00000489169 PABPN1Q86U42 306 aaKnown RBP eCLIP14.91□□□□□ -0.02
CACUL1-204ENST00000489169 HAX1O00165 279 aa14.87□□□□□ -0.03
CACUL1-204ENST00000489169 PRKAR2AP13861 404 aaKnown RBP14.85□□□□□ -0.03
CACUL1-204ENST00000489169 PRR29P0C7W0 189 aa14.74□□□□□ -0.05
CACUL1-204ENST00000489169 EVX2Q03828 476 aa14.73□□□□□ -0.05
CACUL1-204ENST00000489169 CHADLQ6NUI6 762 aa14.68□□□□□ -0.06
CACUL1-204ENST00000489169 CCDC180Q9P1Z9 1646 aa14.67□□□□□ -0.06
CACUL1-204ENST00000489169 C19orf67A6NJJ6 358 aa14.67□□□□□ -0.06
CACUL1-204ENST00000489169 SPDYE4A6NLX3 237 aa14.64□□□□□ -0.07
CACUL1-204ENST00000489169 ABCC9O60706 1549 aa14.63□□□□□ -0.07
CACUL1-204ENST00000489169 STAG3Q9UJ98 1225 aa14.54□□□□□ -0.08
CACUL1-204ENST00000489169 FARP1Q9Y4F1 1045 aaPredicted RBP14.52□□□□□ -0.09
CACUL1-204ENST00000489169 CREBZFQ9NS37 354 aa14.44□□□□□ -0.1
CACUL1-204ENST00000489169 GABBR2O75899 941 aa14.4□□□□□ -0.1
CACUL1-204ENST00000489169 AMER1Q5JTC6 1135 aaPredicted RBP14.4□□□□□ -0.1
CACUL1-204ENST00000489169 PROM2Q8N271 834 aa14.4□□□□□ -0.1
CACUL1-204ENST00000489169 CD44P16070 742 aaKnown RBP14.39□□□□□ -0.11
CACUL1-204ENST00000489169 SLC24A1O60721 1099 aa14.38□□□□□ -0.11
CACUL1-204ENST00000489169 RTN4Q9NQC3 1192 aaKnown RBP14.38□□□□□ -0.11
CACUL1-204ENST00000489169 CLCN6P51797 869 aa14.26□□□□□ -0.13
CACUL1-204ENST00000489169 MNX1P50219 401 aaPredicted RBP14.24□□□□□ -0.13
CACUL1-204ENST00000489169 ZNF579Q8NAF0 562 aaKnown RBP14.23□□□□□ -0.13
CACUL1-204ENST00000489169 ZRANB1Q9UGI0 708 aa14.18□□□□□ -0.14
CACUL1-204ENST00000489169 NPM1P06748 294 aaKnown RBP eCLIP14.15□□□□□ -0.14
CACUL1-204ENST00000489169 POTEIP0CG38 1075 aa14.13□□□□□ -0.15
CACUL1-204ENST00000489169 FKBP8Q14318 412 aa14.1□□□□□ -0.15
CACUL1-204ENST00000489169 PAK3O75914 559 aaPredicted RBP14.08□□□□□ -0.16
CACUL1-204ENST00000489169 ZCCHC6Q5VYS8 1495 aaKnown RBP14.05□□□□□ -0.16
CACUL1-204ENST00000489169 PHF12Q96QT6 1004 aa14.01□□□□□ -0.17
CACUL1-204ENST00000489169 GALR2O43603 387 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 278.7 ms