RNA–Protein interactions for RNA: ENST00000488902.5

DMD-226, Transcript of dystrophin, humanhuman

TSL 2

Gene DMD, Length 771 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-226ENST00000488902 AEBP2Q6ZN18 517 aaPredicted RBP25.08■■□□□ 1.61
DMD-226ENST00000488902 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
DMD-226ENST00000488902 SENP3Q9H4L4 574 aaPredicted RBP21.46■■□□□ 1.03
DMD-226ENST00000488902 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
DMD-226ENST00000488902 FOXD1Q16676 465 aa19.99■□□□□ 0.79
DMD-226ENST00000488902 PLPPR3Q6T4P5 718 aa19.18■□□□□ 0.66
DMD-226ENST00000488902 MSH5O43196 834 aa18.84■□□□□ 0.61
DMD-226ENST00000488902 POTEDQ86YR6 584 aa18.76■□□□□ 0.59
DMD-226ENST00000488902 PIAS4Q8N2W9 510 aaPredicted RBP18.58■□□□□ 0.56
DMD-226ENST00000488902 PPP6R1Q9UPN7 881 aa18.51■□□□□ 0.55
DMD-226ENST00000488902 ADRA2BP18089 450 aa18.4■□□□□ 0.54
DMD-226ENST00000488902 DMRT2Q9Y5R5 561 aa16.99■□□□□ 0.31
DMD-226ENST00000488902 MAPK8IP2Q13387 824 aaPredicted RBP16.97■□□□□ 0.31
DMD-226ENST00000488902 SCAF1Q9H7N4 1312 aaKnown RBP16.91■□□□□ 0.3
DMD-226ENST00000488902 PPP4R3CPQ6ZMV5 832 aa16.85■□□□□ 0.29
DMD-226ENST00000488902 NCBP3Q53F19 620 aaKnown RBP16.44■□□□□ 0.22
DMD-226ENST00000488902 CNKSR2Q8WXI2 1034 aa16.44■□□□□ 0.22
DMD-226ENST00000488902 NISCHQ9Y2I1 1504 aa16.35■□□□□ 0.21
DMD-226ENST00000488902 KCNA4P22459 653 aa16.31■□□□□ 0.2
DMD-226ENST00000488902 HOXD11P31277 338 aaPredicted RBP16.3■□□□□ 0.2
DMD-226ENST00000488902 CACNB1Q02641 598 aaPredicted RBP16.25■□□□□ 0.19
DMD-226ENST00000488902 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
DMD-226ENST00000488902 RNF216Q9NWF9 866 aaPredicted RBP16.15■□□□□ 0.18
DMD-226ENST00000488902 NPM3O75607 178 aaKnown RBP16.13■□□□□ 0.17
DMD-226ENST00000488902 RNF39Q9H2S5 420 aa16.07■□□□□ 0.16
DMD-226ENST00000488902 DNAJC5BQ9UF47 199 aa15.88■□□□□ 0.13
DMD-226ENST00000488902 C1QBPQ07021 282 aaKnown RBP15.83■□□□□ 0.12
DMD-226ENST00000488902 SLC4A1APQ9BWU0 796 aaKnown RBP15.54■□□□□ 0.08
DMD-226ENST00000488902 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.43■□□□□ 0.06
DMD-226ENST00000488902 SLC4A2P04920 1241 aa15.25■□□□□ 0.03
DMD-226ENST00000488902 U3KPZ7 1027 aaPredicted RBP15.11■□□□□ 0.01
DMD-226ENST00000488902 FOXD4L1Q9NU39 408 aa15.1■□□□□ 0.01
DMD-226ENST00000488902 ZBTB22O15209 634 aa14.99□□□□□ -0.01
DMD-226ENST00000488902 MYCNP04198 464 aaPredicted RBP14.96□□□□□ -0.01
DMD-226ENST00000488902 DSG3P32926 999 aa14.94□□□□□ -0.02
DMD-226ENST00000488902 SPINK5Q9NQ38 1064 aaPredicted RBP14.93□□□□□ -0.02
DMD-226ENST00000488902 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
DMD-226ENST00000488902 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
DMD-226ENST00000488902 EHMT2Q96KQ7 1210 aa14.9□□□□□ -0.02
DMD-226ENST00000488902 CAPN15O75808 1086 aa14.89□□□□□ -0.03
DMD-226ENST00000488902 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
DMD-226ENST00000488902 SAMD1Q6SPF0 538 aaPredicted RBP14.83□□□□□ -0.04
DMD-226ENST00000488902 APLP2Q06481 763 aa14.8□□□□□ -0.04
DMD-226ENST00000488902 POTEHQ6S545 545 aa14.66□□□□□ -0.06
DMD-226ENST00000488902 ATXN8OSP0DMR3 200 aa14.65□□□□□ -0.06
DMD-226ENST00000488902 ZNF219Q9P2Y4 722 aaPredicted RBP14.64□□□□□ -0.07
DMD-226ENST00000488902 TRHP20396 242 aaPredicted RBP14.59□□□□□ -0.07
DMD-226ENST00000488902 ABCB7O75027 752 aa14.5□□□□□ -0.09
DMD-226ENST00000488902 ATF5Q9Y2D1 282 aaPredicted RBP14.46□□□□□ -0.09
DMD-226ENST00000488902 RBM42Q9BTD8 480 aaKnown RBP14.28□□□□□ -0.12
DMD-226ENST00000488902 CCDC180Q9P1Z9 1646 aa14.26□□□□□ -0.13
DMD-226ENST00000488902 POLA2Q14181 598 aa14.23□□□□□ -0.13
DMD-226ENST00000488902 ZBTB12Q9Y330 459 aaPredicted RBP14.1□□□□□ -0.15
DMD-226ENST00000488902 CHRDL2Q6WN34 429 aa14.03□□□□□ -0.16
DMD-226ENST00000488902 FBLN2P98095 1184 aa13.95□□□□□ -0.18
DMD-226ENST00000488902 AKT1S1Q96B36 256 aa13.91□□□□□ -0.18
DMD-226ENST00000488902 MKRN4PQ13434 485 aaPredicted RBP13.86□□□□□ -0.19
DMD-226ENST00000488902 REM2Q8IYK8 340 aaPredicted RBP13.74□□□□□ -0.21
DMD-226ENST00000488902 OSCARQ8IYS5 282 aa13.74□□□□□ -0.21
DMD-226ENST00000488902 ZCCHC6Q5VYS8 1495 aaKnown RBP13.68□□□□□ -0.22
DMD-226ENST00000488902 SPDYE2BA6NHP3 402 aa13.68□□□□□ -0.22
DMD-226ENST00000488902 SPDYE6P0CI01 402 aa13.68□□□□□ -0.22
DMD-226ENST00000488902 SPDYE2Q495Y8 402 aa13.68□□□□□ -0.22
DMD-226ENST00000488902 DCAF8L2P0C7V8 631 aa13.67□□□□□ -0.22
DMD-226ENST00000488902 PIP4P2Q8N4L2 257 aa13.65□□□□□ -0.22
DMD-226ENST00000488902 SP7Q8TDD2 431 aaPredicted RBP13.64□□□□□ -0.23
DMD-226ENST00000488902 ABCC9O60706 1549 aa13.64□□□□□ -0.23
DMD-226ENST00000488902 PITPNM1O00562 1244 aa13.57□□□□□ -0.24
DMD-226ENST00000488902 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.24
DMD-226ENST00000488902 SSUH2Q9Y2M2 353 aa13.56□□□□□ -0.24
DMD-226ENST00000488902 ZNF692Q9BU19 519 aaPredicted RBP13.55□□□□□ -0.24
DMD-226ENST00000488902 SPDYE4A6NLX3 237 aa13.53□□□□□ -0.24
DMD-226ENST00000488902 DCAF1Q9Y4B6 1507 aa13.52□□□□□ -0.25
DMD-226ENST00000488902 HAX1O00165 279 aa13.42□□□□□ -0.26
DMD-226ENST00000488902 FKBP8Q14318 412 aa13.41□□□□□ -0.26
DMD-226ENST00000488902 MYO15BQ96JP2 1530 aa13.4□□□□□ -0.26
DMD-226ENST00000488902 NACADO15069 1562 aa13.37□□□□□ -0.27
DMD-226ENST00000488902 PABPN1Q86U42 306 aaKnown RBP eCLIP13.36□□□□□ -0.27
DMD-226ENST00000488902 PROM2Q8N271 834 aa13.35□□□□□ -0.27
DMD-226ENST00000488902 SHROOM4Q9ULL8 1493 aa13.3□□□□□ -0.28
DMD-226ENST00000488902 SPDYE1Q8NFV5 336 aaPredicted RBP13.29□□□□□ -0.28
DMD-226ENST00000488902 RB1CC1Q8TDY2 1594 aa13.28□□□□□ -0.28
DMD-226ENST00000488902 EVX2Q03828 476 aa13.26□□□□□ -0.29
DMD-226ENST00000488902 PRKAR2AP13861 404 aaKnown RBP13.21□□□□□ -0.29
DMD-226ENST00000488902 STAG3Q9UJ98 1225 aa13.21□□□□□ -0.29
DMD-226ENST00000488902 CLEC11AQ9Y240 323 aa13.19□□□□□ -0.3
DMD-226ENST00000488902 C19orf67A6NJJ6 358 aa13.13□□□□□ -0.31
DMD-226ENST00000488902 SCRIBQ14160 1630 aa13.12□□□□□ -0.31
DMD-226ENST00000488902 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
DMD-226ENST00000488902 FBXO3Q9UK99 471 aa13.06□□□□□ -0.32
DMD-226ENST00000488902 GABBR2O75899 941 aa12.97□□□□□ -0.33
DMD-226ENST00000488902 CHADLQ6NUI6 762 aa12.97□□□□□ -0.33
DMD-226ENST00000488902 CREBZFQ9NS37 354 aa12.87□□□□□ -0.35
DMD-226ENST00000488902 UNC13AQ9UPW8 1703 aa12.84□□□□□ -0.35
DMD-226ENST00000488902 PLEKHG5O94827 1062 aa12.83□□□□□ -0.36
DMD-226ENST00000488902 VASPP50552 380 aaPredicted RBP12.83□□□□□ -0.36
DMD-226ENST00000488902 FARP1Q9Y4F1 1045 aaPredicted RBP12.83□□□□□ -0.36
DMD-226ENST00000488902 MIER1Q8N108 512 aa12.82□□□□□ -0.36
DMD-226ENST00000488902 SUPT5HO00267 1087 aaKnown RBP12.8□□□□□ -0.36
DMD-226ENST00000488902 PLCD3Q8N3E9 789 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms