RNA–Protein interactions for RNA: ENST00000488585.1

APLF-205, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 2

Gene APLF, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-205ENST00000488585 AEBP2Q6ZN18 517 aaPredicted RBP18.79■□□□□ 0.6
APLF-205ENST00000488585 CHIC1Q5VXU3 224 aa17.87■□□□□ 0.45
APLF-205ENST00000488585 SENP3Q9H4L4 574 aaPredicted RBP15.94■□□□□ 0.14
APLF-205ENST00000488585 PHF23Q9BUL5 403 aaPredicted RBP15.78■□□□□ 0.12
APLF-205ENST00000488585 FOXD1Q16676 465 aa14.9□□□□□ -0.02
APLF-205ENST00000488585 PLPPR3Q6T4P5 718 aa14.34□□□□□ -0.11
APLF-205ENST00000488585 PPP6R1Q9UPN7 881 aa14.02□□□□□ -0.17
APLF-205ENST00000488585 ADRA2BP18089 450 aa13.97□□□□□ -0.17
APLF-205ENST00000488585 PIAS4Q8N2W9 510 aaPredicted RBP13.91□□□□□ -0.18
APLF-205ENST00000488585 MSH5O43196 834 aa13.84□□□□□ -0.19
APLF-205ENST00000488585 POTEDQ86YR6 584 aa13.44□□□□□ -0.26
APLF-205ENST00000488585 MAPK8IP2Q13387 824 aaPredicted RBP12.83□□□□□ -0.36
APLF-205ENST00000488585 SCAF1Q9H7N4 1312 aaKnown RBP12.68□□□□□ -0.38
APLF-205ENST00000488585 DMRT2Q9Y5R5 561 aa12.67□□□□□ -0.38
APLF-205ENST00000488585 PPP4R3CPQ6ZMV5 832 aa12.61□□□□□ -0.39
APLF-205ENST00000488585 CNKSR2Q8WXI2 1034 aa12.31□□□□□ -0.44
APLF-205ENST00000488585 HOXD11P31277 338 aaPredicted RBP12.23□□□□□ -0.45
APLF-205ENST00000488585 NCBP3Q53F19 620 aaKnown RBP12.22□□□□□ -0.45
APLF-205ENST00000488585 DCAF8L1A6NGE4 600 aa12.16□□□□□ -0.46
APLF-205ENST00000488585 RNF216Q9NWF9 866 aaPredicted RBP12.15□□□□□ -0.46
APLF-205ENST00000488585 KCNA4P22459 653 aa12.09□□□□□ -0.47
APLF-205ENST00000488585 NPM3O75607 178 aaKnown RBP12.05□□□□□ -0.48
APLF-205ENST00000488585 CACNB1Q02641 598 aaPredicted RBP11.86□□□□□ -0.51
APLF-205ENST00000488585 RNF39Q9H2S5 420 aa11.86□□□□□ -0.51
APLF-205ENST00000488585 DNAJC5BQ9UF47 199 aa11.83□□□□□ -0.52
APLF-205ENST00000488585 C1QBPQ07021 282 aaKnown RBP11.66□□□□□ -0.54
APLF-205ENST00000488585 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.65□□□□□ -0.54
APLF-205ENST00000488585 SLC4A1APQ9BWU0 796 aaKnown RBP11.46□□□□□ -0.57
APLF-205ENST00000488585 SLC4A2P04920 1241 aa11.44□□□□□ -0.58
APLF-205ENST00000488585 U3KPZ7 1027 aaPredicted RBP11.44□□□□□ -0.58
APLF-205ENST00000488585 SPINK5Q9NQ38 1064 aaPredicted RBP11.28□□□□□ -0.6
APLF-205ENST00000488585 CAPN15O75808 1086 aa11.21□□□□□ -0.61
APLF-205ENST00000488585 FOXD4L1Q9NU39 408 aa11.19□□□□□ -0.62
APLF-205ENST00000488585 ZBTB22O15209 634 aa11.14□□□□□ -0.63
APLF-205ENST00000488585 MYCNP04198 464 aaPredicted RBP11.14□□□□□ -0.63
APLF-205ENST00000488585 DSG3P32926 999 aa11.14□□□□□ -0.63
APLF-205ENST00000488585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.12□□□□□ -0.63
APLF-205ENST00000488585 HNRNPUL2Q1KMD3 747 aaKnown RBP11.12□□□□□ -0.63
APLF-205ENST00000488585 SAMD1Q6SPF0 538 aaPredicted RBP11.07□□□□□ -0.64
APLF-205ENST00000488585 TRHP20396 242 aaPredicted RBP11.06□□□□□ -0.64
APLF-205ENST00000488585 APLP2Q06481 763 aa11.04□□□□□ -0.64
APLF-205ENST00000488585 ZNF219Q9P2Y4 722 aaPredicted RBP11□□□□□ -0.65
APLF-205ENST00000488585 ABCB7O75027 752 aa10.98□□□□□ -0.65
APLF-205ENST00000488585 CSRNP3Q8WYN3 585 aa10.91□□□□□ -0.66
APLF-205ENST00000488585 EHMT2Q96KQ7 1210 aa10.86□□□□□ -0.67
APLF-205ENST00000488585 ATXN8OSP0DMR3 200 aa10.85□□□□□ -0.67
APLF-205ENST00000488585 ATF5Q9Y2D1 282 aaPredicted RBP10.85□□□□□ -0.67
APLF-205ENST00000488585 NISCHQ9Y2I1 1504 aa10.8□□□□□ -0.68
APLF-205ENST00000488585 POLA2Q14181 598 aa10.78□□□□□ -0.68
APLF-205ENST00000488585 RBM42Q9BTD8 480 aaKnown RBP10.56□□□□□ -0.72
APLF-205ENST00000488585 POTEHQ6S545 545 aa10.53□□□□□ -0.72
APLF-205ENST00000488585 ZBTB12Q9Y330 459 aaPredicted RBP10.53□□□□□ -0.72
APLF-205ENST00000488585 OSCARQ8IYS5 282 aa10.45□□□□□ -0.74
APLF-205ENST00000488585 MKRN4PQ13434 485 aaPredicted RBP10.39□□□□□ -0.75
APLF-205ENST00000488585 FBLN2P98095 1184 aa10.38□□□□□ -0.75
APLF-205ENST00000488585 AKT1S1Q96B36 256 aa10.36□□□□□ -0.75
APLF-205ENST00000488585 CHRDL2Q6WN34 429 aa10.35□□□□□ -0.75
APLF-205ENST00000488585 REM2Q8IYK8 340 aaPredicted RBP10.3□□□□□ -0.76
APLF-205ENST00000488585 SPDYE2BA6NHP3 402 aa10.23□□□□□ -0.77
APLF-205ENST00000488585 SPDYE6P0CI01 402 aa10.23□□□□□ -0.77
APLF-205ENST00000488585 SPDYE2Q495Y8 402 aa10.23□□□□□ -0.77
APLF-205ENST00000488585 PITPNM1O00562 1244 aa10.19□□□□□ -0.78
APLF-205ENST00000488585 SSUH2Q9Y2M2 353 aa10.16□□□□□ -0.78
APLF-205ENST00000488585 PIP4P2Q8N4L2 257 aa10.14□□□□□ -0.79
APLF-205ENST00000488585 ZNF692Q9BU19 519 aaPredicted RBP10.14□□□□□ -0.79
APLF-205ENST00000488585 FXR2P51116 673 aaKnown RBP eCLIP10.08□□□□□ -0.8
APLF-205ENST00000488585 SPDYE4A6NLX3 237 aa10.03□□□□□ -0.8
APLF-205ENST00000488585 CLEC11AQ9Y240 323 aa10.03□□□□□ -0.8
APLF-205ENST00000488585 SPDYE1Q8NFV5 336 aaPredicted RBP10.02□□□□□ -0.81
APLF-205ENST00000488585 PABPN1Q86U42 306 aaKnown RBP eCLIP10□□□□□ -0.81
APLF-205ENST00000488585 HAX1O00165 279 aa9.92□□□□□ -0.82
APLF-205ENST00000488585 PRKAR2AP13861 404 aaKnown RBP9.92□□□□□ -0.82
APLF-205ENST00000488585 PROM2Q8N271 834 aa9.91□□□□□ -0.82
APLF-205ENST00000488585 SP7Q8TDD2 431 aaPredicted RBP9.9□□□□□ -0.82
APLF-205ENST00000488585 PRR29P0C7W0 189 aa9.86□□□□□ -0.83
APLF-205ENST00000488585 EVX2Q03828 476 aa9.86□□□□□ -0.83
APLF-205ENST00000488585 CHADLQ6NUI6 762 aa9.86□□□□□ -0.83
APLF-205ENST00000488585 CCDC180Q9P1Z9 1646 aa9.85□□□□□ -0.83
APLF-205ENST00000488585 FKBP8Q14318 412 aa9.83□□□□□ -0.84
APLF-205ENST00000488585 STAG3Q9UJ98 1225 aa9.81□□□□□ -0.84
APLF-205ENST00000488585 C19orf67A6NJJ6 358 aa9.75□□□□□ -0.85
APLF-205ENST00000488585 ABCC9O60706 1549 aa9.74□□□□□ -0.85
APLF-205ENST00000488585 FARP1Q9Y4F1 1045 aaPredicted RBP9.69□□□□□ -0.86
APLF-205ENST00000488585 CREBZFQ9NS37 354 aa9.67□□□□□ -0.86
APLF-205ENST00000488585 CD44P16070 742 aaKnown RBP9.61□□□□□ -0.87
APLF-205ENST00000488585 GABBR2O75899 941 aa9.6□□□□□ -0.87
APLF-205ENST00000488585 MNX1P50219 401 aaPredicted RBP9.57□□□□□ -0.88
APLF-205ENST00000488585 FBXO3Q9UK99 471 aa9.57□□□□□ -0.88
APLF-205ENST00000488585 MIER1Q8N108 512 aa9.51□□□□□ -0.89
APLF-205ENST00000488585 ZRANB1Q9UGI0 708 aa9.49□□□□□ -0.89
APLF-205ENST00000488585 PLEKHG5O94827 1062 aa9.47□□□□□ -0.89
APLF-205ENST00000488585 NPM1P06748 294 aaKnown RBP eCLIP9.47□□□□□ -0.89
APLF-205ENST00000488585 PLCD3Q8N3E9 789 aa9.46□□□□□ -0.9
APLF-205ENST00000488585 ZNF579Q8NAF0 562 aaKnown RBP9.46□□□□□ -0.9
APLF-205ENST00000488585 POTEIP0CG38 1075 aa9.43□□□□□ -0.9
APLF-205ENST00000488585 VASPP50552 380 aaPredicted RBP9.43□□□□□ -0.9
APLF-205ENST00000488585 ZBTB47Q9UFB7 747 aaPredicted RBP9.41□□□□□ -0.9
APLF-205ENST00000488585 PHF12Q96QT6 1004 aa9.39□□□□□ -0.91
APLF-205ENST00000488585 PAK3O75914 559 aaPredicted RBP9.38□□□□□ -0.91
APLF-205ENST00000488585 CLCN6P51797 869 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms