RNA–Protein interactions for RNA: ENST00000487178.1

TRIP12-216, Transcript of thyroid hormone receptor interactor 12, humanhuman

TSL 2

Gene TRIP12, Length 977 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP12-216ENST00000487178 AEBP2Q6ZN18 517 aaPredicted RBP24.05■■□□□ 1.44
TRIP12-216ENST00000487178 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
TRIP12-216ENST00000487178 SENP3Q9H4L4 574 aaPredicted RBP20.6■□□□□ 0.89
TRIP12-216ENST00000487178 PHF23Q9BUL5 403 aaPredicted RBP20.26■□□□□ 0.83
TRIP12-216ENST00000487178 FOXD1Q16676 465 aa19.28■□□□□ 0.68
TRIP12-216ENST00000487178 POTEDQ86YR6 584 aa18.83■□□□□ 0.6
TRIP12-216ENST00000487178 MSH5O43196 834 aa18.26■□□□□ 0.51
TRIP12-216ENST00000487178 PIAS4Q8N2W9 510 aaPredicted RBP17.87■□□□□ 0.45
TRIP12-216ENST00000487178 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
TRIP12-216ENST00000487178 PLPPR3Q6T4P5 718 aa17.52■□□□□ 0.4
TRIP12-216ENST00000487178 ADRA2BP18089 450 aa17.49■□□□□ 0.39
TRIP12-216ENST00000487178 MAPK8IP2Q13387 824 aaPredicted RBP16.25■□□□□ 0.19
TRIP12-216ENST00000487178 DMRT2Q9Y5R5 561 aa16.24■□□□□ 0.19
TRIP12-216ENST00000487178 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
TRIP12-216ENST00000487178 SCAF1Q9H7N4 1312 aaKnown RBP15.98■□□□□ 0.15
TRIP12-216ENST00000487178 DCAF8L1A6NGE4 600 aa15.62■□□□□ 0.09
TRIP12-216ENST00000487178 RNF39Q9H2S5 420 aa15.53■□□□□ 0.08
TRIP12-216ENST00000487178 HOXD11P31277 338 aaPredicted RBP15.41■□□□□ 0.06
TRIP12-216ENST00000487178 PPP4R3CPQ6ZMV5 832 aa15.28■□□□□ 0.04
TRIP12-216ENST00000487178 C1QBPQ07021 282 aaKnown RBP15.26■□□□□ 0.03
TRIP12-216ENST00000487178 RNF216Q9NWF9 866 aaPredicted RBP15.14■□□□□ 0.01
TRIP12-216ENST00000487178 CNKSR2Q8WXI2 1034 aa15.13■□□□□ 0.01
TRIP12-216ENST00000487178 DNAJC5BQ9UF47 199 aa14.98□□□□□ -0.01
TRIP12-216ENST00000487178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.69□□□□□ -0.061e-6■□□□□ 8.7
TRIP12-216ENST00000487178 POTEHQ6S545 545 aa14.64□□□□□ -0.07
TRIP12-216ENST00000487178 NISCHQ9Y2I1 1504 aa14.51□□□□□ -0.09
TRIP12-216ENST00000487178 NCBP3Q53F19 620 aaKnown RBP14.51□□□□□ -0.09
TRIP12-216ENST00000487178 KCNA4P22459 653 aa14.38□□□□□ -0.11
TRIP12-216ENST00000487178 DSG3P32926 999 aa14.35□□□□□ -0.11
TRIP12-216ENST00000487178 U3KPZ7 1027 aaPredicted RBP14.31□□□□□ -0.12
TRIP12-216ENST00000487178 NPM3O75607 178 aaKnown RBP14.3□□□□□ -0.12
TRIP12-216ENST00000487178 CAPN15O75808 1086 aa14.29□□□□□ -0.12
TRIP12-216ENST00000487178 SPINK5Q9NQ38 1064 aaPredicted RBP14.29□□□□□ -0.12
TRIP12-216ENST00000487178 TRHP20396 242 aaPredicted RBP13.93□□□□□ -0.18
TRIP12-216ENST00000487178 ABCB7O75027 752 aa13.91□□□□□ -0.18
TRIP12-216ENST00000487178 ZNF219Q9P2Y4 722 aaPredicted RBP13.87□□□□□ -0.19
TRIP12-216ENST00000487178 APLP2Q06481 763 aa13.83□□□□□ -0.2
TRIP12-216ENST00000487178 SLC4A2P04920 1241 aa13.82□□□□□ -0.2
TRIP12-216ENST00000487178 SLC4A1APQ9BWU0 796 aaKnown RBP13.72□□□□□ -0.21
TRIP12-216ENST00000487178 RBM42Q9BTD8 480 aaKnown RBP13.7□□□□□ -0.22
TRIP12-216ENST00000487178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.69□□□□□ -0.22
TRIP12-216ENST00000487178 HNRNPUL2Q1KMD3 747 aaKnown RBP13.69□□□□□ -0.22
TRIP12-216ENST00000487178 CHRDL2Q6WN34 429 aa13.64□□□□□ -0.23
TRIP12-216ENST00000487178 SAMD1Q6SPF0 538 aaPredicted RBP13.59□□□□□ -0.23
TRIP12-216ENST00000487178 EHMT2Q96KQ7 1210 aa13.53□□□□□ -0.24
TRIP12-216ENST00000487178 SP7Q8TDD2 431 aaPredicted RBP13.44□□□□□ -0.26
TRIP12-216ENST00000487178 POLA2Q14181 598 aa13.41□□□□□ -0.26
TRIP12-216ENST00000487178 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
TRIP12-216ENST00000487178 AKT1S1Q96B36 256 aa13.26□□□□□ -0.29
TRIP12-216ENST00000487178 ZBTB22O15209 634 aa13.25□□□□□ -0.29
TRIP12-216ENST00000487178 MYCNP04198 464 aaPredicted RBP13.24□□□□□ -0.29
TRIP12-216ENST00000487178 PIP4P2Q8N4L2 257 aa13.19□□□□□ -0.3
TRIP12-216ENST00000487178 FOXD4L1Q9NU39 408 aa13.17□□□□□ -0.3
TRIP12-216ENST00000487178 REM2Q8IYK8 340 aaPredicted RBP13.15□□□□□ -0.3
TRIP12-216ENST00000487178 HAX1O00165 279 aa13.12□□□□□ -0.31
TRIP12-216ENST00000487178 ZBTB12Q9Y330 459 aaPredicted RBP13.08□□□□□ -0.32
TRIP12-216ENST00000487178 PITPNM1O00562 1244 aa13.01□□□□□ -0.33
TRIP12-216ENST00000487178 FXR2P51116 673 aaKnown RBP eCLIP13.01□□□□□ -0.331e-7■■■■■ 27.3
TRIP12-216ENST00000487178 OSCARQ8IYS5 282 aa13.01□□□□□ -0.33
TRIP12-216ENST00000487178 ATF5Q9Y2D1 282 aaPredicted RBP13□□□□□ -0.33
TRIP12-216ENST00000487178 CCDC180Q9P1Z9 1646 aa12.92□□□□□ -0.34
TRIP12-216ENST00000487178 EVX2Q03828 476 aa12.91□□□□□ -0.34
TRIP12-216ENST00000487178 ABCC9O60706 1549 aa12.88□□□□□ -0.35
TRIP12-216ENST00000487178 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
TRIP12-216ENST00000487178 PRKAR2AP13861 404 aaKnown RBP12.67□□□□□ -0.38
TRIP12-216ENST00000487178 SPDYE2BA6NHP3 402 aa12.64□□□□□ -0.39
TRIP12-216ENST00000487178 SPDYE6P0CI01 402 aa12.64□□□□□ -0.39
TRIP12-216ENST00000487178 SPDYE2Q495Y8 402 aa12.64□□□□□ -0.39
TRIP12-216ENST00000487178 C19orf67A6NJJ6 358 aa12.61□□□□□ -0.39
TRIP12-216ENST00000487178 LHX8Q68G74 356 aa12.61□□□□□ -0.39
TRIP12-216ENST00000487178 GABBR2O75899 941 aa12.58□□□□□ -0.4
TRIP12-216ENST00000487178 CLEC11AQ9Y240 323 aa12.58□□□□□ -0.4
TRIP12-216ENST00000487178 SPDYE1Q8NFV5 336 aaPredicted RBP12.57□□□□□ -0.4
TRIP12-216ENST00000487178 FBLN2P98095 1184 aa12.52□□□□□ -0.41
TRIP12-216ENST00000487178 CHADLQ6NUI6 762 aa12.41□□□□□ -0.42
TRIP12-216ENST00000487178 SSUH2Q9Y2M2 353 aa12.41□□□□□ -0.42
TRIP12-216ENST00000487178 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
TRIP12-216ENST00000487178 MKRN4PQ13434 485 aaPredicted RBP12.36□□□□□ -0.43
TRIP12-216ENST00000487178 POTEIP0CG38 1075 aa12.32□□□□□ -0.44
TRIP12-216ENST00000487178 PLSCR2Q9NRY7 297 aa12.3□□□□□ -0.44
TRIP12-216ENST00000487178 PRR29P0C7W0 189 aa12.28□□□□□ -0.44
TRIP12-216ENST00000487178 RB1CC1Q8TDY2 1594 aa12.27□□□□□ -0.44
TRIP12-216ENST00000487178 NACADO15069 1562 aa12.24□□□□□ -0.45
TRIP12-216ENST00000487178 CD44P16070 742 aaKnown RBP12.23□□□□□ -0.45
TRIP12-216ENST00000487178 PABPN1Q86U42 306 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRIP12-216ENST00000487178 DCAF8L2P0C7V8 631 aa12.17□□□□□ -0.46
TRIP12-216ENST00000487178 CLCN6P51797 869 aa12.16□□□□□ -0.46
TRIP12-216ENST00000487178 FARP1Q9Y4F1 1045 aaPredicted RBP12.16□□□□□ -0.46
TRIP12-216ENST00000487178 MYO15BQ96JP2 1530 aa12.16□□□□□ -0.46
TRIP12-216ENST00000487178 DCBLD2Q96PD2 775 aa12.12□□□□□ -0.47
TRIP12-216ENST00000487178 ZCCHC6Q5VYS8 1495 aaKnown RBP12.03□□□□□ -0.48
TRIP12-216ENST00000487178 DCAF1Q9Y4B6 1507 aa12.01□□□□□ -0.49
TRIP12-216ENST00000487178 FKBP8Q14318 412 aa12.01□□□□□ -0.49
TRIP12-216ENST00000487178 ZNF579Q8NAF0 562 aaKnown RBP12.01□□□□□ -0.49
TRIP12-216ENST00000487178 BICRAQ9NZM4 1560 aa11.97□□□□□ -0.49
TRIP12-216ENST00000487178 OTUD5Q96G74 571 aa11.97□□□□□ -0.49
TRIP12-216ENST00000487178 ZRANB1Q9UGI0 708 aa11.97□□□□□ -0.49
TRIP12-216ENST00000487178 UNC13AQ9UPW8 1703 aa11.94□□□□□ -0.5
TRIP12-216ENST00000487178 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
TRIP12-216ENST00000487178 POTEMA6NI47 508 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms