RNA–Protein interactions for RNA: ENST00000480564.1

C9orf135-203, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 5

Gene C9orf135, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-203ENST00000480564 AEBP2Q6ZN18 517 aaPredicted RBP28.16■■■□□ 2.1
C9orf135-203ENST00000480564 CHIC1Q5VXU3 224 aa27.59■■■□□ 2.01
C9orf135-203ENST00000480564 PHF23Q9BUL5 403 aaPredicted RBP24.38■■□□□ 1.49
C9orf135-203ENST00000480564 SENP3Q9H4L4 574 aaPredicted RBP23.7■■□□□ 1.38
C9orf135-203ENST00000480564 PLPPR3Q6T4P5 718 aa22.43■■□□□ 1.18
C9orf135-203ENST00000480564 FOXD1Q16676 465 aa22.08■■□□□ 1.13
C9orf135-203ENST00000480564 PPP6R1Q9UPN7 881 aa21.46■■□□□ 1.03
C9orf135-203ENST00000480564 ADRA2BP18089 450 aa21.42■■□□□ 1.02
C9orf135-203ENST00000480564 PIAS4Q8N2W9 510 aaPredicted RBP20.82■□□□□ 0.92
C9orf135-203ENST00000480564 MSH5O43196 834 aa20.15■□□□□ 0.82
C9orf135-203ENST00000480564 POTEDQ86YR6 584 aa20.06■□□□□ 0.8
C9orf135-203ENST00000480564 PPP4R3CPQ6ZMV5 832 aa19.85■□□□□ 0.77
C9orf135-203ENST00000480564 KCNA4P22459 653 aa19.67■□□□□ 0.74
C9orf135-203ENST00000480564 SCAF1Q9H7N4 1312 aaKnown RBP19.41■□□□□ 0.7
C9orf135-203ENST00000480564 MAPK8IP2Q13387 824 aaPredicted RBP19.4■□□□□ 0.7
C9orf135-203ENST00000480564 NCBP3Q53F19 620 aaKnown RBP19.27■□□□□ 0.68
C9orf135-203ENST00000480564 CNKSR2Q8WXI2 1034 aa19.2■□□□□ 0.66
C9orf135-203ENST00000480564 NPM3O75607 178 aaKnown RBP19.13■□□□□ 0.65
C9orf135-203ENST00000480564 DMRT2Q9Y5R5 561 aa19■□□□□ 0.63
C9orf135-203ENST00000480564 RNF216Q9NWF9 866 aaPredicted RBP18.78■□□□□ 0.6
C9orf135-203ENST00000480564 SLC4A1APQ9BWU0 796 aaKnown RBP18.7■□□□□ 0.58
C9orf135-203ENST00000480564 HOXD11P31277 338 aaPredicted RBP18.68■□□□□ 0.58
C9orf135-203ENST00000480564 DNAJC5BQ9UF47 199 aa18.46■□□□□ 0.55
C9orf135-203ENST00000480564 EHMT2Q96KQ7 1210 aa18.44■□□□□ 0.54
C9orf135-203ENST00000480564 ZBTB22O15209 634 aa18.16■□□□□ 0.5
C9orf135-203ENST00000480564 CSRNP3Q8WYN3 585 aa18.16■□□□□ 0.5
C9orf135-203ENST00000480564 DCAF8L1A6NGE4 600 aa18.14■□□□□ 0.49
C9orf135-203ENST00000480564 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
C9orf135-203ENST00000480564 FOXD4L1Q9NU39 408 aa17.96■□□□□ 0.47
C9orf135-203ENST00000480564 NISCHQ9Y2I1 1504 aa17.95■□□□□ 0.46
C9orf135-203ENST00000480564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.76■□□□□ 0.43
C9orf135-203ENST00000480564 MYCNP04198 464 aaPredicted RBP17.6■□□□□ 0.41
C9orf135-203ENST00000480564 U3KPZ7 1027 aaPredicted RBP17.58■□□□□ 0.4
C9orf135-203ENST00000480564 RNF39Q9H2S5 420 aa17.37■□□□□ 0.37
C9orf135-203ENST00000480564 ATXN8OSP0DMR3 200 aa17.27■□□□□ 0.36
C9orf135-203ENST00000480564 ATF5Q9Y2D1 282 aaPredicted RBP17.26■□□□□ 0.35
C9orf135-203ENST00000480564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.25■□□□□ 0.35
C9orf135-203ENST00000480564 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
C9orf135-203ENST00000480564 SAMD1Q6SPF0 538 aaPredicted RBP17.25■□□□□ 0.35
C9orf135-203ENST00000480564 C1QBPQ07021 282 aaKnown RBP17.1■□□□□ 0.33
C9orf135-203ENST00000480564 SPINK5Q9NQ38 1064 aaPredicted RBP17.05■□□□□ 0.32
C9orf135-203ENST00000480564 APLP2Q06481 763 aa16.99■□□□□ 0.31
C9orf135-203ENST00000480564 CACNB1Q02641 598 aaPredicted RBP16.97■□□□□ 0.31
C9orf135-203ENST00000480564 CAPN15O75808 1086 aa16.89■□□□□ 0.29
C9orf135-203ENST00000480564 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
C9orf135-203ENST00000480564 ZNF219Q9P2Y4 722 aaPredicted RBP16.86■□□□□ 0.29
C9orf135-203ENST00000480564 ABCB7O75027 752 aa16.66■□□□□ 0.26
C9orf135-203ENST00000480564 POLA2Q14181 598 aa16.66■□□□□ 0.26
C9orf135-203ENST00000480564 DSG3P32926 999 aa16.61■□□□□ 0.25
C9orf135-203ENST00000480564 MKRN4PQ13434 485 aaPredicted RBP16.5■□□□□ 0.23
C9orf135-203ENST00000480564 FKBP8Q14318 412 aa16.36■□□□□ 0.21
C9orf135-203ENST00000480564 FBLN2P98095 1184 aa16.33■□□□□ 0.2
C9orf135-203ENST00000480564 ZBTB12Q9Y330 459 aaPredicted RBP16.28■□□□□ 0.2
C9orf135-203ENST00000480564 CCDC180Q9P1Z9 1646 aa16.14■□□□□ 0.17
C9orf135-203ENST00000480564 SPDYE4A6NLX3 237 aa16.13■□□□□ 0.17
C9orf135-203ENST00000480564 ABCC9O60706 1549 aa16.11■□□□□ 0.17
C9orf135-203ENST00000480564 OSCARQ8IYS5 282 aa16.11■□□□□ 0.17
C9orf135-203ENST00000480564 PROM2Q8N271 834 aa15.93■□□□□ 0.14
C9orf135-203ENST00000480564 SPDYE2BA6NHP3 402 aa15.91■□□□□ 0.14
C9orf135-203ENST00000480564 SPDYE6P0CI01 402 aa15.91■□□□□ 0.14
C9orf135-203ENST00000480564 SPDYE2Q495Y8 402 aa15.91■□□□□ 0.14
C9orf135-203ENST00000480564 ZNF692Q9BU19 519 aaPredicted RBP15.9■□□□□ 0.14
C9orf135-203ENST00000480564 SSUH2Q9Y2M2 353 aa15.87■□□□□ 0.13
C9orf135-203ENST00000480564 PABPN1Q86U42 306 aaKnown RBP eCLIP15.73■□□□□ 0.11
C9orf135-203ENST00000480564 RBM42Q9BTD8 480 aaKnown RBP15.69■□□□□ 0.1
C9orf135-203ENST00000480564 FBXO3Q9UK99 471 aa15.61■□□□□ 0.09
C9orf135-203ENST00000480564 AKT1S1Q96B36 256 aa15.59■□□□□ 0.09
C9orf135-203ENST00000480564 POTEHQ6S545 545 aa15.57■□□□□ 0.08
C9orf135-203ENST00000480564 REM2Q8IYK8 340 aaPredicted RBP15.51■□□□□ 0.07
C9orf135-203ENST00000480564 VASPP50552 380 aaPredicted RBP15.49■□□□□ 0.07
C9orf135-203ENST00000480564 RB1CC1Q8TDY2 1594 aa15.43■□□□□ 0.06
C9orf135-203ENST00000480564 STAG3Q9UJ98 1225 aa15.4■□□□□ 0.06
C9orf135-203ENST00000480564 SPDYE1Q8NFV5 336 aaPredicted RBP15.39■□□□□ 0.05
C9orf135-203ENST00000480564 PITPNM1O00562 1244 aa15.35■□□□□ 0.05
C9orf135-203ENST00000480564 CLEC11AQ9Y240 323 aa15.35■□□□□ 0.05
C9orf135-203ENST00000480564 IFNLR1Q8IU57 520 aaPredicted RBP15.34■□□□□ 0.05
C9orf135-203ENST00000480564 NACADO15069 1562 aa15.32■□□□□ 0.04
C9orf135-203ENST00000480564 RTN4Q9NQC3 1192 aaKnown RBP15.27■□□□□ 0.04
C9orf135-203ENST00000480564 MIER1Q8N108 512 aa15.25■□□□□ 0.03
C9orf135-203ENST00000480564 PLCD3Q8N3E9 789 aa15.23■□□□□ 0.03
C9orf135-203ENST00000480564 DCAF8L2P0C7V8 631 aa15.21■□□□□ 0.03
C9orf135-203ENST00000480564 PRR29P0C7W0 189 aa15.21■□□□□ 0.03
C9orf135-203ENST00000480564 AMER1Q5JTC6 1135 aaPredicted RBP15.18■□□□□ 0.02
C9orf135-203ENST00000480564 CREBZFQ9NS37 354 aa15.15■□□□□ 0.02
C9orf135-203ENST00000480564 MYO15BQ96JP2 1530 aa15.15■□□□□ 0.02
C9orf135-203ENST00000480564 KLHL34Q8N239 644 aa15.13■□□□□ 0.01
C9orf135-203ENST00000480564 CHRDL2Q6WN34 429 aa15.05■□□□□ -0
C9orf135-203ENST00000480564 SPOCK2Q92563 424 aa15.05■□□□□ -0
C9orf135-203ENST00000480564 MNX1P50219 401 aaPredicted RBP15.04■□□□□ -0
C9orf135-203ENST00000480564 PLEKHG5O94827 1062 aa15.03■□□□□ -0
C9orf135-203ENST00000480564 CHADLQ6NUI6 762 aa15.03■□□□□ -0
C9orf135-203ENST00000480564 FXR2P51116 673 aaKnown RBP eCLIP15□□□□□ -0.01
C9orf135-203ENST00000480564 ZBTB47Q9UFB7 747 aaPredicted RBP14.97□□□□□ -0.01
C9orf135-203ENST00000480564 PIP4P2Q8N4L2 257 aa14.95□□□□□ -0.02
C9orf135-203ENST00000480564 PRKAR2AP13861 404 aaKnown RBP14.93□□□□□ -0.02
C9orf135-203ENST00000480564 NUBP1P53384 320 aa14.91□□□□□ -0.02
C9orf135-203ENST00000480564 PKD2Q13563 968 aa14.91□□□□□ -0.02
C9orf135-203ENST00000480564 DCAF1Q9Y4B6 1507 aa14.91□□□□□ -0.02
C9orf135-203ENST00000480564 SHROOM4Q9ULL8 1493 aa14.89□□□□□ -0.03
C9orf135-203ENST00000480564 ZCCHC6Q5VYS8 1495 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms