RNA–Protein interactions for RNA: ENST00000478022.2

CHAMP1-203, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

TSL 3

Gene CHAMP1, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-203ENST00000478022 AEBP2Q6ZN18 517 aaPredicted RBP19.65■□□□□ 0.74
CHAMP1-203ENST00000478022 CHIC1Q5VXU3 224 aa19.06■□□□□ 0.64
CHAMP1-203ENST00000478022 SENP3Q9H4L4 574 aaPredicted RBP16.86■□□□□ 0.29
CHAMP1-203ENST00000478022 PHF23Q9BUL5 403 aaPredicted RBP16.66■□□□□ 0.26
CHAMP1-203ENST00000478022 FOXD1Q16676 465 aa15.58■□□□□ 0.08
CHAMP1-203ENST00000478022 PLPPR3Q6T4P5 718 aa15.43■□□□□ 0.06
CHAMP1-203ENST00000478022 ADRA2BP18089 450 aa14.76□□□□□ -0.05
CHAMP1-203ENST00000478022 PPP6R1Q9UPN7 881 aa14.76□□□□□ -0.05
CHAMP1-203ENST00000478022 PIAS4Q8N2W9 510 aaPredicted RBP14.68□□□□□ -0.06
CHAMP1-203ENST00000478022 MSH5O43196 834 aa14.57□□□□□ -0.08
CHAMP1-203ENST00000478022 SCAF1Q9H7N4 1312 aaKnown RBP13.68□□□□□ -0.22
CHAMP1-203ENST00000478022 POTEDQ86YR6 584 aa13.57□□□□□ -0.24
CHAMP1-203ENST00000478022 PPP4R3CPQ6ZMV5 832 aa13.52□□□□□ -0.25
CHAMP1-203ENST00000478022 MAPK8IP2Q13387 824 aaPredicted RBP13.43□□□□□ -0.26
CHAMP1-203ENST00000478022 DMRT2Q9Y5R5 561 aa13.39□□□□□ -0.27
CHAMP1-203ENST00000478022 CNKSR2Q8WXI2 1034 aa13.24□□□□□ -0.29
CHAMP1-203ENST00000478022 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.29
CHAMP1-203ENST00000478022 RNF216Q9NWF9 866 aaPredicted RBP13.03□□□□□ -0.32
CHAMP1-203ENST00000478022 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.33
CHAMP1-203ENST00000478022 KCNA4P22459 653 aa12.9□□□□□ -0.34
CHAMP1-203ENST00000478022 NPM3O75607 178 aaKnown RBP12.89□□□□□ -0.35
CHAMP1-203ENST00000478022 DCAF8L1A6NGE4 600 aa12.81□□□□□ -0.36
CHAMP1-203ENST00000478022 DNAJC5BQ9UF47 199 aa12.64□□□□□ -0.39
CHAMP1-203ENST00000478022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.44□□□□□ -0.42
CHAMP1-203ENST00000478022 RNF39Q9H2S5 420 aa12.4□□□□□ -0.42
CHAMP1-203ENST00000478022 NISCHQ9Y2I1 1504 aa12.35□□□□□ -0.43
CHAMP1-203ENST00000478022 C1QBPQ07021 282 aaKnown RBP12.31□□□□□ -0.44
CHAMP1-203ENST00000478022 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
CHAMP1-203ENST00000478022 CACNB1Q02641 598 aaPredicted RBP12.26□□□□□ -0.45
CHAMP1-203ENST00000478022 SLC4A2P04920 1241 aa12.2□□□□□ -0.46
CHAMP1-203ENST00000478022 U3KPZ7 1027 aaPredicted RBP12.14□□□□□ -0.47
CHAMP1-203ENST00000478022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.07□□□□□ -0.48
CHAMP1-203ENST00000478022 HNRNPUL2Q1KMD3 747 aaKnown RBP12.07□□□□□ -0.48
CHAMP1-203ENST00000478022 APLP2Q06481 763 aa12.03□□□□□ -0.48
CHAMP1-203ENST00000478022 FOXD4L1Q9NU39 408 aa12.01□□□□□ -0.49
CHAMP1-203ENST00000478022 MYCNP04198 464 aaPredicted RBP11.98□□□□□ -0.49
CHAMP1-203ENST00000478022 SAMD1Q6SPF0 538 aaPredicted RBP11.98□□□□□ -0.49
CHAMP1-203ENST00000478022 CAPN15O75808 1086 aa11.88□□□□□ -0.51
CHAMP1-203ENST00000478022 SPINK5Q9NQ38 1064 aaPredicted RBP11.84□□□□□ -0.51
CHAMP1-203ENST00000478022 ZBTB22O15209 634 aa11.81□□□□□ -0.52
CHAMP1-203ENST00000478022 ZNF219Q9P2Y4 722 aaPredicted RBP11.81□□□□□ -0.52
CHAMP1-203ENST00000478022 TRHP20396 242 aaPredicted RBP11.75□□□□□ -0.53
CHAMP1-203ENST00000478022 DSG3P32926 999 aa11.7□□□□□ -0.54
CHAMP1-203ENST00000478022 ATXN8OSP0DMR3 200 aa11.67□□□□□ -0.54
CHAMP1-203ENST00000478022 EHMT2Q96KQ7 1210 aa11.63□□□□□ -0.55
CHAMP1-203ENST00000478022 CSRNP3Q8WYN3 585 aa11.6□□□□□ -0.55
CHAMP1-203ENST00000478022 ABCB7O75027 752 aa11.57□□□□□ -0.56
CHAMP1-203ENST00000478022 ATF5Q9Y2D1 282 aaPredicted RBP11.54□□□□□ -0.56
CHAMP1-203ENST00000478022 POLA2Q14181 598 aa11.51□□□□□ -0.57
CHAMP1-203ENST00000478022 ZBTB12Q9Y330 459 aaPredicted RBP11.42□□□□□ -0.58
CHAMP1-203ENST00000478022 RBM42Q9BTD8 480 aaKnown RBP11.27□□□□□ -0.61
CHAMP1-203ENST00000478022 FBLN2P98095 1184 aa11.25□□□□□ -0.61
CHAMP1-203ENST00000478022 OSCARQ8IYS5 282 aa11.1□□□□□ -0.63
CHAMP1-203ENST00000478022 MKRN4PQ13434 485 aaPredicted RBP11.06□□□□□ -0.64
CHAMP1-203ENST00000478022 SPDYE2BA6NHP3 402 aa11.04□□□□□ -0.64
CHAMP1-203ENST00000478022 SPDYE6P0CI01 402 aa11.04□□□□□ -0.64
CHAMP1-203ENST00000478022 SPDYE2Q495Y8 402 aa11.04□□□□□ -0.64
CHAMP1-203ENST00000478022 AKT1S1Q96B36 256 aa11.04□□□□□ -0.64
CHAMP1-203ENST00000478022 ZNF692Q9BU19 519 aaPredicted RBP10.94□□□□□ -0.66
CHAMP1-203ENST00000478022 CCDC180Q9P1Z9 1646 aa10.94□□□□□ -0.66
CHAMP1-203ENST00000478022 REM2Q8IYK8 340 aaPredicted RBP10.89□□□□□ -0.67
CHAMP1-203ENST00000478022 SSUH2Q9Y2M2 353 aa10.88□□□□□ -0.67
CHAMP1-203ENST00000478022 CHRDL2Q6WN34 429 aa10.82□□□□□ -0.68
CHAMP1-203ENST00000478022 SPDYE4A6NLX3 237 aa10.78□□□□□ -0.68
CHAMP1-203ENST00000478022 SPDYE1Q8NFV5 336 aaPredicted RBP10.78□□□□□ -0.68
CHAMP1-203ENST00000478022 PABPN1Q86U42 306 aaKnown RBP eCLIP10.76□□□□□ -0.69
CHAMP1-203ENST00000478022 PITPNM1O00562 1244 aa10.74□□□□□ -0.69
CHAMP1-203ENST00000478022 ABCC9O60706 1549 aa10.73□□□□□ -0.69
CHAMP1-203ENST00000478022 POTEHQ6S545 545 aa10.72□□□□□ -0.69
CHAMP1-203ENST00000478022 CLEC11AQ9Y240 323 aa10.68□□□□□ -0.7
CHAMP1-203ENST00000478022 STAG3Q9UJ98 1225 aa10.64□□□□□ -0.71
CHAMP1-203ENST00000478022 FXR2P51116 673 aaKnown RBP eCLIP10.61□□□□□ -0.71
CHAMP1-203ENST00000478022 PIP4P2Q8N4L2 257 aa10.6□□□□□ -0.71
CHAMP1-203ENST00000478022 PRR29P0C7W0 189 aa10.59□□□□□ -0.71
CHAMP1-203ENST00000478022 PROM2Q8N271 834 aa10.55□□□□□ -0.72
CHAMP1-203ENST00000478022 FKBP8Q14318 412 aa10.54□□□□□ -0.72
CHAMP1-203ENST00000478022 PRKAR2AP13861 404 aaKnown RBP10.5□□□□□ -0.73
CHAMP1-203ENST00000478022 CHADLQ6NUI6 762 aa10.38□□□□□ -0.75
CHAMP1-203ENST00000478022 HAX1O00165 279 aa10.36□□□□□ -0.75
CHAMP1-203ENST00000478022 FBXO3Q9UK99 471 aa10.35□□□□□ -0.75
CHAMP1-203ENST00000478022 CREBZFQ9NS37 354 aa10.34□□□□□ -0.75
CHAMP1-203ENST00000478022 FARP1Q9Y4F1 1045 aaPredicted RBP10.34□□□□□ -0.75
CHAMP1-203ENST00000478022 PLEKHG5O94827 1062 aa10.33□□□□□ -0.76
CHAMP1-203ENST00000478022 DCAF8L2P0C7V8 631 aa10.31□□□□□ -0.76
CHAMP1-203ENST00000478022 ZCCHC6Q5VYS8 1495 aaKnown RBP10.29□□□□□ -0.76
CHAMP1-203ENST00000478022 NPM1P06748 294 aaKnown RBP eCLIP10.28□□□□□ -0.76
CHAMP1-203ENST00000478022 RB1CC1Q8TDY2 1594 aa10.27□□□□□ -0.76
CHAMP1-203ENST00000478022 MIER1Q8N108 512 aa10.27□□□□□ -0.77
CHAMP1-203ENST00000478022 C19orf67A6NJJ6 358 aa10.26□□□□□ -0.77
CHAMP1-203ENST00000478022 NACADO15069 1562 aa10.26□□□□□ -0.77
CHAMP1-203ENST00000478022 PLCD3Q8N3E9 789 aa10.24□□□□□ -0.77
CHAMP1-203ENST00000478022 SP7Q8TDD2 431 aaPredicted RBP10.22□□□□□ -0.77
CHAMP1-203ENST00000478022 ZBTB47Q9UFB7 747 aaPredicted RBP10.22□□□□□ -0.77
CHAMP1-203ENST00000478022 CD44P16070 742 aaKnown RBP10.19□□□□□ -0.78
CHAMP1-203ENST00000478022 MYO15BQ96JP2 1530 aa10.18□□□□□ -0.78
CHAMP1-203ENST00000478022 MNX1P50219 401 aaPredicted RBP10.18□□□□□ -0.78
CHAMP1-203ENST00000478022 PAK3O75914 559 aaPredicted RBP10.17□□□□□ -0.78
CHAMP1-203ENST00000478022 DCAF1Q9Y4B6 1507 aa10.17□□□□□ -0.78
CHAMP1-203ENST00000478022 EVX2Q03828 476 aa10.14□□□□□ -0.79
CHAMP1-203ENST00000478022 UNC13AQ9UPW8 1703 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms