RNA–Protein interactions for RNA: ENST00000477721.1

GFM1-205, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-205ENST00000477721 AEBP2Q6ZN18 517 aaPredicted RBP21.9■■□□□ 1.1
GFM1-205ENST00000477721 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
GFM1-205ENST00000477721 SENP3Q9H4L4 574 aaPredicted RBP18.59■□□□□ 0.57
GFM1-205ENST00000477721 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
GFM1-205ENST00000477721 FOXD1Q16676 465 aa17.4■□□□□ 0.38
GFM1-205ENST00000477721 POTEDQ86YR6 584 aa17.05■□□□□ 0.32
GFM1-205ENST00000477721 PLPPR3Q6T4P5 718 aa16.51■□□□□ 0.23
GFM1-205ENST00000477721 PPP6R1Q9UPN7 881 aa16.3■□□□□ 0.2
GFM1-205ENST00000477721 MSH5O43196 834 aa16.22■□□□□ 0.19
GFM1-205ENST00000477721 ADRA2BP18089 450 aa16.21■□□□□ 0.19
GFM1-205ENST00000477721 PIAS4Q8N2W9 510 aaPredicted RBP16.18■□□□□ 0.18
GFM1-205ENST00000477721 MAPK8IP2Q13387 824 aaPredicted RBP14.93□□□□□ -0.02
GFM1-205ENST00000477721 DMRT2Q9Y5R5 561 aa14.77□□□□□ -0.05
GFM1-205ENST00000477721 SCAF1Q9H7N4 1312 aaKnown RBP14.75□□□□□ -0.05
GFM1-205ENST00000477721 PPP4R3CPQ6ZMV5 832 aa14.5□□□□□ -0.09
GFM1-205ENST00000477721 CACNB1Q02641 598 aaPredicted RBP14.25□□□□□ -0.13
GFM1-205ENST00000477721 HOXD11P31277 338 aaPredicted RBP14.24□□□□□ -0.13
GFM1-205ENST00000477721 CNKSR2Q8WXI2 1034 aa14.21□□□□□ -0.13
GFM1-205ENST00000477721 DCAF8L1A6NGE4 600 aa14.11□□□□□ -0.15
GFM1-205ENST00000477721 RNF216Q9NWF9 866 aaPredicted RBP14.1□□□□□ -0.15
GFM1-205ENST00000477721 NCBP3Q53F19 620 aaKnown RBP13.88□□□□□ -0.19
GFM1-205ENST00000477721 RNF39Q9H2S5 420 aa13.88□□□□□ -0.19
GFM1-205ENST00000477721 NPM3O75607 178 aaKnown RBP13.74□□□□□ -0.21
GFM1-205ENST00000477721 DNAJC5BQ9UF47 199 aa13.74□□□□□ -0.21
GFM1-205ENST00000477721 C1QBPQ07021 282 aaKnown RBP13.66□□□□□ -0.22
GFM1-205ENST00000477721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.51□□□□□ -0.25
GFM1-205ENST00000477721 KCNA4P22459 653 aa13.46□□□□□ -0.25
GFM1-205ENST00000477721 U3KPZ7 1027 aaPredicted RBP13.26□□□□□ -0.29
GFM1-205ENST00000477721 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
GFM1-205ENST00000477721 POTEHQ6S545 545 aa13.16□□□□□ -0.3
GFM1-205ENST00000477721 SPINK5Q9NQ38 1064 aaPredicted RBP13.09□□□□□ -0.31
GFM1-205ENST00000477721 CAPN15O75808 1086 aa13.01□□□□□ -0.33
GFM1-205ENST00000477721 DSG3P32926 999 aa13□□□□□ -0.33
GFM1-205ENST00000477721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.81□□□□□ -0.36
GFM1-205ENST00000477721 TRHP20396 242 aaPredicted RBP12.81□□□□□ -0.36
GFM1-205ENST00000477721 HNRNPUL2Q1KMD3 747 aaKnown RBP12.81□□□□□ -0.36
GFM1-205ENST00000477721 APLP2Q06481 763 aa12.78□□□□□ -0.36
GFM1-205ENST00000477721 SAMD1Q6SPF0 538 aaPredicted RBP12.75□□□□□ -0.37
GFM1-205ENST00000477721 ZNF219Q9P2Y4 722 aaPredicted RBP12.75□□□□□ -0.37
GFM1-205ENST00000477721 ABCB7O75027 752 aa12.72□□□□□ -0.37
GFM1-205ENST00000477721 SLC4A1APQ9BWU0 796 aaKnown RBP12.66□□□□□ -0.38
GFM1-205ENST00000477721 MYCNP04198 464 aaPredicted RBP12.65□□□□□ -0.38
GFM1-205ENST00000477721 FOXD4L1Q9NU39 408 aa12.53□□□□□ -0.4
GFM1-205ENST00000477721 POLA2Q14181 598 aa12.49□□□□□ -0.41
GFM1-205ENST00000477721 ATF5Q9Y2D1 282 aaPredicted RBP12.46□□□□□ -0.41
GFM1-205ENST00000477721 ZBTB22O15209 634 aa12.4□□□□□ -0.42
GFM1-205ENST00000477721 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
GFM1-205ENST00000477721 ATXN8OSP0DMR3 200 aa12.16□□□□□ -0.46
GFM1-205ENST00000477721 ZBTB12Q9Y330 459 aaPredicted RBP12.15□□□□□ -0.46
GFM1-205ENST00000477721 CHRDL2Q6WN34 429 aa12.11□□□□□ -0.47
GFM1-205ENST00000477721 AKT1S1Q96B36 256 aa12.08□□□□□ -0.48
GFM1-205ENST00000477721 OSCARQ8IYS5 282 aa12.06□□□□□ -0.48
GFM1-205ENST00000477721 EHMT2Q96KQ7 1210 aa12.05□□□□□ -0.48
GFM1-205ENST00000477721 NISCHQ9Y2I1 1504 aa12.04□□□□□ -0.48
GFM1-205ENST00000477721 REM2Q8IYK8 340 aaPredicted RBP12□□□□□ -0.49
GFM1-205ENST00000477721 SP7Q8TDD2 431 aaPredicted RBP11.93□□□□□ -0.5
GFM1-205ENST00000477721 MKRN4PQ13434 485 aaPredicted RBP11.88□□□□□ -0.51
GFM1-205ENST00000477721 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
GFM1-205ENST00000477721 FBLN2P98095 1184 aa11.86□□□□□ -0.51
GFM1-205ENST00000477721 PITPNM1O00562 1244 aa11.84□□□□□ -0.51
GFM1-205ENST00000477721 PIP4P2Q8N4L2 257 aa11.83□□□□□ -0.52
GFM1-205ENST00000477721 SPDYE2BA6NHP3 402 aa11.82□□□□□ -0.52
GFM1-205ENST00000477721 SPDYE6P0CI01 402 aa11.82□□□□□ -0.52
GFM1-205ENST00000477721 SPDYE2Q495Y8 402 aa11.82□□□□□ -0.52
GFM1-205ENST00000477721 FXR2P51116 673 aaKnown RBP eCLIP11.78□□□□□ -0.52
GFM1-205ENST00000477721 ZNF692Q9BU19 519 aaPredicted RBP11.69□□□□□ -0.54
GFM1-205ENST00000477721 SSUH2Q9Y2M2 353 aa11.69□□□□□ -0.54
GFM1-205ENST00000477721 SPDYE1Q8NFV5 336 aaPredicted RBP11.61□□□□□ -0.55
GFM1-205ENST00000477721 HAX1O00165 279 aa11.6□□□□□ -0.55
GFM1-205ENST00000477721 CLEC11AQ9Y240 323 aa11.59□□□□□ -0.55
GFM1-205ENST00000477721 EVX2Q03828 476 aa11.55□□□□□ -0.56
GFM1-205ENST00000477721 PRKAR2AP13861 404 aaKnown RBP11.53□□□□□ -0.56
GFM1-205ENST00000477721 PABPN1Q86U42 306 aaKnown RBP eCLIP11.52□□□□□ -0.57
GFM1-205ENST00000477721 CHADLQ6NUI6 762 aa11.42□□□□□ -0.58
GFM1-205ENST00000477721 PRR29P0C7W0 189 aa11.41□□□□□ -0.58
GFM1-205ENST00000477721 C19orf67A6NJJ6 358 aa11.4□□□□□ -0.58
GFM1-205ENST00000477721 PLSCR2Q9NRY7 297 aa11.27□□□□□ -0.61
GFM1-205ENST00000477721 FARP1Q9Y4F1 1045 aaPredicted RBP11.25□□□□□ -0.61
GFM1-205ENST00000477721 SPDYE4A6NLX3 237 aa11.24□□□□□ -0.61
GFM1-205ENST00000477721 GABBR2O75899 941 aa11.24□□□□□ -0.61
GFM1-205ENST00000477721 LHX8Q68G74 356 aa11.22□□□□□ -0.61
GFM1-205ENST00000477721 CREBZFQ9NS37 354 aa11.17□□□□□ -0.62
GFM1-205ENST00000477721 STAG3Q9UJ98 1225 aa11.17□□□□□ -0.62
GFM1-205ENST00000477721 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.62
GFM1-205ENST00000477721 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
GFM1-205ENST00000477721 POTEIP0CG38 1075 aa11.04□□□□□ -0.64
GFM1-205ENST00000477721 PROM2Q8N271 834 aa11.02□□□□□ -0.65
GFM1-205ENST00000477721 CLCN6P51797 869 aa11.01□□□□□ -0.65
GFM1-205ENST00000477721 MNX1P50219 401 aaPredicted RBP11□□□□□ -0.65
GFM1-205ENST00000477721 ZRANB1Q9UGI0 708 aa11□□□□□ -0.65
GFM1-205ENST00000477721 ZNF579Q8NAF0 562 aaKnown RBP10.99□□□□□ -0.65
GFM1-205ENST00000477721 ABCC9O60706 1549 aa10.97□□□□□ -0.65
GFM1-205ENST00000477721 NPM1P06748 294 aaKnown RBP eCLIP10.9□□□□□ -0.66
GFM1-205ENST00000477721 GALR2O43603 387 aaPredicted RBP10.88□□□□□ -0.67
GFM1-205ENST00000477721 DCBLD2Q96PD2 775 aa10.87□□□□□ -0.67
GFM1-205ENST00000477721 PHF12Q96QT6 1004 aa10.86□□□□□ -0.67
GFM1-205ENST00000477721 PAK3O75914 559 aaPredicted RBP10.83□□□□□ -0.68
GFM1-205ENST00000477721 FKBP8Q14318 412 aa10.81□□□□□ -0.68
GFM1-205ENST00000477721 CCDC180Q9P1Z9 1646 aa10.8□□□□□ -0.68
GFM1-205ENST00000477721 MIER1Q8N108 512 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms