RNA–Protein interactions for RNA: ENST00000474733.5

CCDC146-207, Transcript of coiled-coil domain containing 146, humanhuman

TSL 3

Gene CCDC146, Length 720 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146-207ENST00000474733 AEBP2Q6ZN18 517 aaPredicted RBP23.49■■□□□ 1.35
CCDC146-207ENST00000474733 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
CCDC146-207ENST00000474733 SENP3Q9H4L4 574 aaPredicted RBP19.92■□□□□ 0.78
CCDC146-207ENST00000474733 PHF23Q9BUL5 403 aaPredicted RBP19.69■□□□□ 0.74
CCDC146-207ENST00000474733 FOXD1Q16676 465 aa18.68■□□□□ 0.58
CCDC146-207ENST00000474733 MSH5O43196 834 aa17.45■□□□□ 0.38
CCDC146-207ENST00000474733 PLPPR3Q6T4P5 718 aa17.45■□□□□ 0.38
CCDC146-207ENST00000474733 POTEDQ86YR6 584 aa17.45■□□□□ 0.38
CCDC146-207ENST00000474733 PPP6R1Q9UPN7 881 aa17.37■□□□□ 0.37
CCDC146-207ENST00000474733 PIAS4Q8N2W9 510 aaPredicted RBP17.3■□□□□ 0.36
CCDC146-207ENST00000474733 ADRA2BP18089 450 aa17.23■□□□□ 0.35
CCDC146-207ENST00000474733 MAPK8IP2Q13387 824 aaPredicted RBP15.91■□□□□ 0.14
CCDC146-207ENST00000474733 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
CCDC146-207ENST00000474733 SCAF1Q9H7N4 1312 aaKnown RBP15.63■□□□□ 0.09
CCDC146-207ENST00000474733 PPP4R3CPQ6ZMV5 832 aa15.3■□□□□ 0.04
CCDC146-207ENST00000474733 HOXD11P31277 338 aaPredicted RBP15.19■□□□□ 0.02
CCDC146-207ENST00000474733 CACNB1Q02641 598 aaPredicted RBP15.06■□□□□ 0
CCDC146-207ENST00000474733 CNKSR2Q8WXI2 1034 aa15.04■□□□□ -0
CCDC146-207ENST00000474733 DCAF8L1A6NGE4 600 aa15.01□□□□□ -0.01
CCDC146-207ENST00000474733 RNF216Q9NWF9 866 aaPredicted RBP14.98□□□□□ -0.01
CCDC146-207ENST00000474733 RNF39Q9H2S5 420 aa14.96□□□□□ -0.01
CCDC146-207ENST00000474733 DNAJC5BQ9UF47 199 aa14.71□□□□□ -0.05
CCDC146-207ENST00000474733 C1QBPQ07021 282 aaKnown RBP14.67□□□□□ -0.06
CCDC146-207ENST00000474733 NCBP3Q53F19 620 aaKnown RBP14.55□□□□□ -0.08
CCDC146-207ENST00000474733 NPM3O75607 178 aaKnown RBP14.47□□□□□ -0.09
CCDC146-207ENST00000474733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.33□□□□□ -0.12
CCDC146-207ENST00000474733 U3KPZ7 1027 aaPredicted RBP14.13□□□□□ -0.15
CCDC146-207ENST00000474733 KCNA4P22459 653 aa14.02□□□□□ -0.17
CCDC146-207ENST00000474733 SPINK5Q9NQ38 1064 aaPredicted RBP13.98□□□□□ -0.17
CCDC146-207ENST00000474733 DSG3P32926 999 aa13.94□□□□□ -0.18
CCDC146-207ENST00000474733 SLC4A2P04920 1241 aa13.93□□□□□ -0.18
CCDC146-207ENST00000474733 CAPN15O75808 1086 aa13.84□□□□□ -0.19
CCDC146-207ENST00000474733 POTEHQ6S545 545 aa13.6□□□□□ -0.23
CCDC146-207ENST00000474733 TRHP20396 242 aaPredicted RBP13.58□□□□□ -0.24
CCDC146-207ENST00000474733 ZNF219Q9P2Y4 722 aaPredicted RBP13.56□□□□□ -0.24
CCDC146-207ENST00000474733 ABCB7O75027 752 aa13.55□□□□□ -0.24
CCDC146-207ENST00000474733 APLP2Q06481 763 aa13.53□□□□□ -0.24
CCDC146-207ENST00000474733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.52□□□□□ -0.25
CCDC146-207ENST00000474733 HNRNPUL2Q1KMD3 747 aaKnown RBP13.52□□□□□ -0.25
CCDC146-207ENST00000474733 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
CCDC146-207ENST00000474733 MYCNP04198 464 aaPredicted RBP13.33□□□□□ -0.28
CCDC146-207ENST00000474733 POLA2Q14181 598 aa13.22□□□□□ -0.29
CCDC146-207ENST00000474733 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
CCDC146-207ENST00000474733 ATF5Q9Y2D1 282 aaPredicted RBP13.14□□□□□ -0.31
CCDC146-207ENST00000474733 SLC4A1APQ9BWU0 796 aaKnown RBP13.12□□□□□ -0.31
CCDC146-207ENST00000474733 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
CCDC146-207ENST00000474733 CHRDL2Q6WN34 429 aa13.03□□□□□ -0.32
CCDC146-207ENST00000474733 ZBTB22O15209 634 aa12.96□□□□□ -0.33
CCDC146-207ENST00000474733 AKT1S1Q96B36 256 aa12.9□□□□□ -0.34
CCDC146-207ENST00000474733 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
CCDC146-207ENST00000474733 OSCARQ8IYS5 282 aa12.82□□□□□ -0.36
CCDC146-207ENST00000474733 REM2Q8IYK8 340 aaPredicted RBP12.8□□□□□ -0.36
CCDC146-207ENST00000474733 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
CCDC146-207ENST00000474733 PIP4P2Q8N4L2 257 aa12.72□□□□□ -0.37
CCDC146-207ENST00000474733 PITPNM1O00562 1244 aa12.67□□□□□ -0.38
CCDC146-207ENST00000474733 SP7Q8TDD2 431 aaPredicted RBP12.65□□□□□ -0.38
CCDC146-207ENST00000474733 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCDC146-207ENST00000474733 MKRN4PQ13434 485 aaPredicted RBP12.54□□□□□ -0.4
CCDC146-207ENST00000474733 SPDYE2BA6NHP3 402 aa12.52□□□□□ -0.41
CCDC146-207ENST00000474733 SPDYE6P0CI01 402 aa12.52□□□□□ -0.41
CCDC146-207ENST00000474733 SPDYE2Q495Y8 402 aa12.52□□□□□ -0.41
CCDC146-207ENST00000474733 FBLN2P98095 1184 aa12.46□□□□□ -0.41
CCDC146-207ENST00000474733 HAX1O00165 279 aa12.44□□□□□ -0.42
CCDC146-207ENST00000474733 EVX2Q03828 476 aa12.44□□□□□ -0.42
CCDC146-207ENST00000474733 SSUH2Q9Y2M2 353 aa12.41□□□□□ -0.42
CCDC146-207ENST00000474733 SPDYE1Q8NFV5 336 aaPredicted RBP12.31□□□□□ -0.44
CCDC146-207ENST00000474733 ZNF692Q9BU19 519 aaPredicted RBP12.3□□□□□ -0.44
CCDC146-207ENST00000474733 PRKAR2AP13861 404 aaKnown RBP12.29□□□□□ -0.44
CCDC146-207ENST00000474733 CLEC11AQ9Y240 323 aa12.26□□□□□ -0.45
CCDC146-207ENST00000474733 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
CCDC146-207ENST00000474733 NISCHQ9Y2I1 1504 aa12.24□□□□□ -0.45
CCDC146-207ENST00000474733 CSRNP3Q8WYN3 585 aa12.15□□□□□ -0.46
CCDC146-207ENST00000474733 CHADLQ6NUI6 762 aa12.14□□□□□ -0.47
CCDC146-207ENST00000474733 PABPN1Q86U42 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
CCDC146-207ENST00000474733 GABBR2O75899 941 aa12.07□□□□□ -0.48
CCDC146-207ENST00000474733 PRR29P0C7W0 189 aa12.05□□□□□ -0.48
CCDC146-207ENST00000474733 FARP1Q9Y4F1 1045 aaPredicted RBP11.94□□□□□ -0.5
CCDC146-207ENST00000474733 POTEIP0CG38 1075 aa11.9□□□□□ -0.5
CCDC146-207ENST00000474733 CD44P16070 742 aaKnown RBP11.88□□□□□ -0.51
CCDC146-207ENST00000474733 LHX8Q68G74 356 aa11.85□□□□□ -0.51
CCDC146-207ENST00000474733 CREBZFQ9NS37 354 aa11.83□□□□□ -0.52
CCDC146-207ENST00000474733 CLCN6P51797 869 aa11.75□□□□□ -0.53
CCDC146-207ENST00000474733 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
CCDC146-207ENST00000474733 EHMT2Q96KQ7 1210 aa11.75□□□□□ -0.53
CCDC146-207ENST00000474733 SPDYE4A6NLX3 237 aa11.72□□□□□ -0.53
CCDC146-207ENST00000474733 STAG3Q9UJ98 1225 aa11.72□□□□□ -0.53
CCDC146-207ENST00000474733 ZRANB1Q9UGI0 708 aa11.67□□□□□ -0.54
CCDC146-207ENST00000474733 MNX1P50219 401 aaPredicted RBP11.66□□□□□ -0.54
CCDC146-207ENST00000474733 GALR2O43603 387 aaPredicted RBP11.62□□□□□ -0.55
CCDC146-207ENST00000474733 DCBLD2Q96PD2 775 aa11.59□□□□□ -0.55
CCDC146-207ENST00000474733 PROM2Q8N271 834 aa11.56□□□□□ -0.56
CCDC146-207ENST00000474733 PHF12Q96QT6 1004 aa11.55□□□□□ -0.56
CCDC146-207ENST00000474733 POTEB2H3BUK9 544 aa11.5□□□□□ -0.57
CCDC146-207ENST00000474733 PELP1Q8IZL8 1130 aaKnown RBP11.47□□□□□ -0.57
CCDC146-207ENST00000474733 NPM1P06748 294 aaKnown RBP eCLIP11.46□□□□□ -0.57
CCDC146-207ENST00000474733 OTUD5Q96G74 571 aa11.46□□□□□ -0.57
CCDC146-207ENST00000474733 PAK3O75914 559 aaPredicted RBP11.43□□□□□ -0.58
CCDC146-207ENST00000474733 ABCC9O60706 1549 aa11.42□□□□□ -0.58
CCDC146-207ENST00000474733 MS4A3Q96HJ5 214 aa11.39□□□□□ -0.59
CCDC146-207ENST00000474733 ASTLQ6HA08 431 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms