RNA–Protein interactions for RNA: ENST00000471030.1

LSMEM1-204, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 3

Gene LSMEM1, Length 483 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-204ENST00000471030 AEBP2Q6ZN18 517 aaPredicted RBP18.87■□□□□ 0.61
LSMEM1-204ENST00000471030 CHIC1Q5VXU3 224 aa18.47■□□□□ 0.55
LSMEM1-204ENST00000471030 SENP3Q9H4L4 574 aaPredicted RBP16.28■□□□□ 0.2
LSMEM1-204ENST00000471030 PHF23Q9BUL5 403 aaPredicted RBP16.1■□□□□ 0.17
LSMEM1-204ENST00000471030 PLPPR3Q6T4P5 718 aa15.05■□□□□ -0
LSMEM1-204ENST00000471030 FOXD1Q16676 465 aa14.95□□□□□ -0.02
LSMEM1-204ENST00000471030 ADRA2BP18089 450 aa14.25□□□□□ -0.13
LSMEM1-204ENST00000471030 PPP6R1Q9UPN7 881 aa14.22□□□□□ -0.13
LSMEM1-204ENST00000471030 PIAS4Q8N2W9 510 aaPredicted RBP14.18□□□□□ -0.14
LSMEM1-204ENST00000471030 MSH5O43196 834 aa14.03□□□□□ -0.16
LSMEM1-204ENST00000471030 POTEDQ86YR6 584 aa13.92□□□□□ -0.18
LSMEM1-204ENST00000471030 SCAF1Q9H7N4 1312 aaKnown RBP13.32□□□□□ -0.28
LSMEM1-204ENST00000471030 NISCHQ9Y2I1 1504 aa13.22□□□□□ -0.29
LSMEM1-204ENST00000471030 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
LSMEM1-204ENST00000471030 NCBP3Q53F19 620 aaKnown RBP12.95□□□□□ -0.34
LSMEM1-204ENST00000471030 MAPK8IP2Q13387 824 aaPredicted RBP12.92□□□□□ -0.34
LSMEM1-204ENST00000471030 DMRT2Q9Y5R5 561 aa12.91□□□□□ -0.34
LSMEM1-204ENST00000471030 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
LSMEM1-204ENST00000471030 RNF216Q9NWF9 866 aaPredicted RBP12.66□□□□□ -0.38
LSMEM1-204ENST00000471030 KCNA4P22459 653 aa12.64□□□□□ -0.39
LSMEM1-204ENST00000471030 HOXD11P31277 338 aaPredicted RBP12.59□□□□□ -0.39
LSMEM1-204ENST00000471030 NPM3O75607 178 aaKnown RBP12.56□□□□□ -0.4
LSMEM1-204ENST00000471030 DCAF8L1A6NGE4 600 aa12.4□□□□□ -0.42
LSMEM1-204ENST00000471030 DNAJC5BQ9UF47 199 aa12.31□□□□□ -0.44
LSMEM1-204ENST00000471030 SLC4A1APQ9BWU0 796 aaKnown RBP12.13□□□□□ -0.47
LSMEM1-204ENST00000471030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.07□□□□□ -0.48
LSMEM1-204ENST00000471030 RNF39Q9H2S5 420 aa11.91□□□□□ -0.5
LSMEM1-204ENST00000471030 C1QBPQ07021 282 aaKnown RBP11.85□□□□□ -0.51
LSMEM1-204ENST00000471030 SLC4A2P04920 1241 aa11.82□□□□□ -0.52
LSMEM1-204ENST00000471030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.81□□□□□ -0.52
LSMEM1-204ENST00000471030 HNRNPUL2Q1KMD3 747 aaKnown RBP11.81□□□□□ -0.52
LSMEM1-204ENST00000471030 FOXD4L1Q9NU39 408 aa11.8□□□□□ -0.52
LSMEM1-204ENST00000471030 APLP2Q06481 763 aa11.77□□□□□ -0.53
LSMEM1-204ENST00000471030 U3KPZ7 1027 aaPredicted RBP11.74□□□□□ -0.53
LSMEM1-204ENST00000471030 CACNB1Q02641 598 aaPredicted RBP11.73□□□□□ -0.53
LSMEM1-204ENST00000471030 MYCNP04198 464 aaPredicted RBP11.72□□□□□ -0.53
LSMEM1-204ENST00000471030 SAMD1Q6SPF0 538 aaPredicted RBP11.7□□□□□ -0.54
LSMEM1-204ENST00000471030 EHMT2Q96KQ7 1210 aa11.59□□□□□ -0.55
LSMEM1-204ENST00000471030 ZBTB22O15209 634 aa11.55□□□□□ -0.56
LSMEM1-204ENST00000471030 CAPN15O75808 1086 aa11.5□□□□□ -0.57
LSMEM1-204ENST00000471030 ZNF219Q9P2Y4 722 aaPredicted RBP11.49□□□□□ -0.57
LSMEM1-204ENST00000471030 ATXN8OSP0DMR3 200 aa11.47□□□□□ -0.57
LSMEM1-204ENST00000471030 CSRNP3Q8WYN3 585 aa11.46□□□□□ -0.57
LSMEM1-204ENST00000471030 SPINK5Q9NQ38 1064 aaPredicted RBP11.41□□□□□ -0.58
LSMEM1-204ENST00000471030 TRHP20396 242 aaPredicted RBP11.38□□□□□ -0.59
LSMEM1-204ENST00000471030 CCDC180Q9P1Z9 1646 aa11.37□□□□□ -0.59
LSMEM1-204ENST00000471030 DSG3P32926 999 aa11.27□□□□□ -0.61
LSMEM1-204ENST00000471030 ATF5Q9Y2D1 282 aaPredicted RBP11.2□□□□□ -0.62
LSMEM1-204ENST00000471030 ABCB7O75027 752 aa11.18□□□□□ -0.62
LSMEM1-204ENST00000471030 ZBTB12Q9Y330 459 aaPredicted RBP11.17□□□□□ -0.62
LSMEM1-204ENST00000471030 ZCCHC6Q5VYS8 1495 aaKnown RBP11.17□□□□□ -0.62
LSMEM1-204ENST00000471030 POLA2Q14181 598 aa11.16□□□□□ -0.62
LSMEM1-204ENST00000471030 DCAF1Q9Y4B6 1507 aa11.03□□□□□ -0.64
LSMEM1-204ENST00000471030 FBLN2P98095 1184 aa11.02□□□□□ -0.65
LSMEM1-204ENST00000471030 RBM42Q9BTD8 480 aaKnown RBP10.93□□□□□ -0.66
LSMEM1-204ENST00000471030 SHROOM4Q9ULL8 1493 aa10.88□□□□□ -0.67
LSMEM1-204ENST00000471030 MYO15BQ96JP2 1530 aa10.82□□□□□ -0.68
LSMEM1-204ENST00000471030 DCAF8L2P0C7V8 631 aa10.79□□□□□ -0.68
LSMEM1-204ENST00000471030 POTEHQ6S545 545 aa10.79□□□□□ -0.68
LSMEM1-204ENST00000471030 OSCARQ8IYS5 282 aa10.77□□□□□ -0.69
LSMEM1-204ENST00000471030 SPDYE2BA6NHP3 402 aa10.76□□□□□ -0.69
LSMEM1-204ENST00000471030 SPDYE6P0CI01 402 aa10.76□□□□□ -0.69
LSMEM1-204ENST00000471030 SPDYE2Q495Y8 402 aa10.76□□□□□ -0.69
LSMEM1-204ENST00000471030 MKRN4PQ13434 485 aaPredicted RBP10.74□□□□□ -0.69
LSMEM1-204ENST00000471030 SUPT5HO00267 1087 aaKnown RBP10.72□□□□□ -0.69
LSMEM1-204ENST00000471030 AKT1S1Q96B36 256 aa10.69□□□□□ -0.7
LSMEM1-204ENST00000471030 ZNF692Q9BU19 519 aaPredicted RBP10.66□□□□□ -0.7
LSMEM1-204ENST00000471030 NACADO15069 1562 aa10.58□□□□□ -0.72
LSMEM1-204ENST00000471030 SPDYE4A6NLX3 237 aa10.58□□□□□ -0.72
LSMEM1-204ENST00000471030 SSUH2Q9Y2M2 353 aa10.57□□□□□ -0.72
LSMEM1-204ENST00000471030 REM2Q8IYK8 340 aaPredicted RBP10.51□□□□□ -0.73
LSMEM1-204ENST00000471030 ABCC9O60706 1549 aa10.48□□□□□ -0.73
LSMEM1-204ENST00000471030 PABPN1Q86U42 306 aaKnown RBP eCLIP10.48□□□□□ -0.73
LSMEM1-204ENST00000471030 SPDYE1Q8NFV5 336 aaPredicted RBP10.48□□□□□ -0.73
LSMEM1-204ENST00000471030 FKBP8Q14318 412 aa10.44□□□□□ -0.74
LSMEM1-204ENST00000471030 STAG3Q9UJ98 1225 aa10.43□□□□□ -0.74
LSMEM1-204ENST00000471030 SCRIBQ14160 1630 aa10.4□□□□□ -0.75
LSMEM1-204ENST00000471030 CHRDL2Q6WN34 429 aa10.39□□□□□ -0.75
LSMEM1-204ENST00000471030 RB1CC1Q8TDY2 1594 aa10.39□□□□□ -0.75
LSMEM1-204ENST00000471030 CLEC11AQ9Y240 323 aa10.38□□□□□ -0.75
LSMEM1-204ENST00000471030 RSF1Q96T23 1441 aaPredicted RBP10.38□□□□□ -0.75
LSMEM1-204ENST00000471030 PITPNM1O00562 1244 aa10.36□□□□□ -0.75
LSMEM1-204ENST00000471030 PROM2Q8N271 834 aa10.33□□□□□ -0.76
LSMEM1-204ENST00000471030 PRR29P0C7W0 189 aa10.31□□□□□ -0.76
LSMEM1-204ENST00000471030 FBXO3Q9UK99 471 aa10.28□□□□□ -0.76
LSMEM1-204ENST00000471030 BAZ1AQ9NRL2 1556 aaPredicted RBP10.22□□□□□ -0.77
LSMEM1-204ENST00000471030 PLEKHG5O94827 1062 aa10.22□□□□□ -0.77
LSMEM1-204ENST00000471030 FXR2P51116 673 aaKnown RBP eCLIP10.21□□□□□ -0.77
LSMEM1-204ENST00000471030 PIP4P2Q8N4L2 257 aa10.19□□□□□ -0.78
LSMEM1-204ENST00000471030 TRIM41Q8WV44 630 aa10.16□□□□□ -0.78
LSMEM1-204ENST00000471030 PRKAR2AP13861 404 aaKnown RBP10.15□□□□□ -0.78
LSMEM1-204ENST00000471030 CECR2Q9BXF3 1484 aa10.15□□□□□ -0.78
LSMEM1-204ENST00000471030 MROH2BQ7Z745 1585 aa10.14□□□□□ -0.79
LSMEM1-204ENST00000471030 ZBTB47Q9UFB7 747 aaPredicted RBP10.1□□□□□ -0.79
LSMEM1-204ENST00000471030 PLCD3Q8N3E9 789 aa10.09□□□□□ -0.79
LSMEM1-204ENST00000471030 MIER1Q8N108 512 aa10.08□□□□□ -0.8
LSMEM1-204ENST00000471030 TOP2AP11388 1531 aaKnown RBP10.06□□□□□ -0.8
LSMEM1-204ENST00000471030 NPM1P06748 294 aaKnown RBP eCLIP10.05□□□□□ -0.8
LSMEM1-204ENST00000471030 SMARCA4P51532 1647 aa10.04□□□□□ -0.8
LSMEM1-204ENST00000471030 CHADLQ6NUI6 762 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms