RNA–Protein interactions for RNA: ENST00000467765.1

CENPF-203, Transcript of centromere protein F, humanhuman

TSL 2

Gene CENPF, Length 1,427 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPF-203ENST00000467765 AEBP2Q6ZN18 517 aaPredicted RBP26.14■■□□□ 1.77
CENPF-203ENST00000467765 CHIC1Q5VXU3 224 aa24.36■■□□□ 1.49
CENPF-203ENST00000467765 SENP3Q9H4L4 574 aaPredicted RBP22.39■■□□□ 1.17
CENPF-203ENST00000467765 PHF23Q9BUL5 403 aaPredicted RBP22.01■■□□□ 1.11
CENPF-203ENST00000467765 POTEDQ86YR6 584 aa21.05■□□□□ 0.96
CENPF-203ENST00000467765 FOXD1Q16676 465 aa21.01■□□□□ 0.95
CENPF-203ENST00000467765 MSH5O43196 834 aa19.97■□□□□ 0.79
CENPF-203ENST00000467765 PIAS4Q8N2W9 510 aaPredicted RBP19.38■□□□□ 0.69
CENPF-203ENST00000467765 PPP6R1Q9UPN7 881 aa18.98■□□□□ 0.63
CENPF-203ENST00000467765 ADRA2BP18089 450 aa18.85■□□□□ 0.61
CENPF-203ENST00000467765 PLPPR3Q6T4P5 718 aa18.69■□□□□ 0.58
CENPF-203ENST00000467765 CACNB1Q02641 598 aaPredicted RBP17.71■□□□□ 0.43
CENPF-203ENST00000467765 DMRT2Q9Y5R5 561 aa17.63■□□□□ 0.41
CENPF-203ENST00000467765 MAPK8IP2Q13387 824 aaPredicted RBP17.6■□□□□ 0.41
CENPF-203ENST00000467765 SCAF1Q9H7N4 1312 aaKnown RBP17.22■□□□□ 0.35
CENPF-203ENST00000467765 RNF39Q9H2S5 420 aa16.97■□□□□ 0.31
CENPF-203ENST00000467765 DCAF8L1A6NGE4 600 aa16.94■□□□□ 0.3
CENPF-203ENST00000467765 C1QBPQ07021 282 aaKnown RBP16.67■□□□□ 0.26
CENPF-203ENST00000467765 HOXD11P31277 338 aaPredicted RBP16.64■□□□□ 0.25
CENPF-203ENST00000467765 POTEHQ6S545 545 aa16.31■□□□□ 0.2
CENPF-203ENST00000467765 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
CENPF-203ENST00000467765 RNF216Q9NWF9 866 aaPredicted RBP16.26■□□□□ 0.19
CENPF-203ENST00000467765 DNAJC5BQ9UF47 199 aa16.23■□□□□ 0.19
CENPF-203ENST00000467765 CNKSR2Q8WXI2 1034 aa16.19■□□□□ 0.18
CENPF-203ENST00000467765 NISCHQ9Y2I1 1504 aa16.1■□□□□ 0.17
CENPF-203ENST00000467765 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.84■□□□□ 0.132e-6■□□□□ 8.7
CENPF-203ENST00000467765 DSG3P32926 999 aa15.61■□□□□ 0.09
CENPF-203ENST00000467765 SPINK5Q9NQ38 1064 aaPredicted RBP15.47■□□□□ 0.07
CENPF-203ENST00000467765 CAPN15O75808 1086 aa15.46■□□□□ 0.07
CENPF-203ENST00000467765 U3KPZ7 1027 aaPredicted RBP15.42■□□□□ 0.06
CENPF-203ENST00000467765 NCBP3Q53F19 620 aaKnown RBP15.36■□□□□ 0.05
CENPF-203ENST00000467765 NPM3O75607 178 aaKnown RBP15.16■□□□□ 0.02
CENPF-203ENST00000467765 ABCB7O75027 752 aa15.03■□□□□ -0
CENPF-203ENST00000467765 TRHP20396 242 aaPredicted RBP15□□□□□ -0.01
CENPF-203ENST00000467765 CHRDL2Q6WN34 429 aa14.92□□□□□ -0.02
CENPF-203ENST00000467765 ZNF219Q9P2Y4 722 aaPredicted RBP14.92□□□□□ -0.02
CENPF-203ENST00000467765 RBM42Q9BTD8 480 aaKnown RBP14.88□□□□□ -0.03
CENPF-203ENST00000467765 SP7Q8TDD2 431 aaPredicted RBP14.86□□□□□ -0.03
CENPF-203ENST00000467765 APLP2Q06481 763 aa14.84□□□□□ -0.03
CENPF-203ENST00000467765 SLC4A2P04920 1241 aa14.73□□□□□ -0.05
CENPF-203ENST00000467765 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.63□□□□□ -0.07
CENPF-203ENST00000467765 HNRNPUL2Q1KMD3 747 aaKnown RBP14.63□□□□□ -0.07
CENPF-203ENST00000467765 SAMD1Q6SPF0 538 aaPredicted RBP14.5□□□□□ -0.09
CENPF-203ENST00000467765 POLA2Q14181 598 aa14.41□□□□□ -0.1
CENPF-203ENST00000467765 PIP4P2Q8N4L2 257 aa14.39□□□□□ -0.11
CENPF-203ENST00000467765 HAX1O00165 279 aa14.37□□□□□ -0.11
CENPF-203ENST00000467765 AKT1S1Q96B36 256 aa14.37□□□□□ -0.11
CENPF-203ENST00000467765 ABCC9O60706 1549 aa14.3□□□□□ -0.12
CENPF-203ENST00000467765 KCNA4P22459 653 aa14.25□□□□□ -0.13
CENPF-203ENST00000467765 REM2Q8IYK8 340 aaPredicted RBP14.24□□□□□ -0.13
CENPF-203ENST00000467765 FXR2P51116 673 aaKnown RBP eCLIP14.17□□□□□ -0.142e-6■■■□□ 18.9
CENPF-203ENST00000467765 EVX2Q03828 476 aa14.16□□□□□ -0.14
CENPF-203ENST00000467765 CCDC180Q9P1Z9 1646 aa14.12□□□□□ -0.15
CENPF-203ENST00000467765 PITPNM1O00562 1244 aa14.09□□□□□ -0.15
CENPF-203ENST00000467765 MYCNP04198 464 aaPredicted RBP14.02□□□□□ -0.16
CENPF-203ENST00000467765 ZBTB12Q9Y330 459 aaPredicted RBP13.99□□□□□ -0.17
CENPF-203ENST00000467765 OSCARQ8IYS5 282 aa13.97□□□□□ -0.17
CENPF-203ENST00000467765 LHX8Q68G74 356 aa13.95□□□□□ -0.18
CENPF-203ENST00000467765 ATF5Q9Y2D1 282 aaPredicted RBP13.81□□□□□ -0.2
CENPF-203ENST00000467765 PLSCR2Q9NRY7 297 aa13.8□□□□□ -0.2
CENPF-203ENST00000467765 GABBR2O75899 941 aa13.78□□□□□ -0.2
CENPF-203ENST00000467765 C19orf67A6NJJ6 358 aa13.74□□□□□ -0.21
CENPF-203ENST00000467765 PRKAR2AP13861 404 aaKnown RBP13.73□□□□□ -0.21
CENPF-203ENST00000467765 ZCCHC6Q5VYS8 1495 aaKnown RBP13.6□□□□□ -0.23
CENPF-203ENST00000467765 DNAJC5Q9H3Z4 198 aa13.6□□□□□ -0.23
CENPF-203ENST00000467765 CLEC11AQ9Y240 323 aa13.54□□□□□ -0.24
CENPF-203ENST00000467765 SPDYE2BA6NHP3 402 aa13.52□□□□□ -0.25
CENPF-203ENST00000467765 SPDYE6P0CI01 402 aa13.52□□□□□ -0.25
CENPF-203ENST00000467765 SPDYE2Q495Y8 402 aa13.52□□□□□ -0.25
CENPF-203ENST00000467765 SPDYE1Q8NFV5 336 aaPredicted RBP13.5□□□□□ -0.25
CENPF-203ENST00000467765 POTEIP0CG38 1075 aa13.49□□□□□ -0.25
CENPF-203ENST00000467765 SLC4A1APQ9BWU0 796 aaKnown RBP13.45□□□□□ -0.26
CENPF-203ENST00000467765 DCAF1Q9Y4B6 1507 aa13.44□□□□□ -0.26
CENPF-203ENST00000467765 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
CENPF-203ENST00000467765 CHADLQ6NUI6 762 aa13.39□□□□□ -0.27
CENPF-203ENST00000467765 FBLN2P98095 1184 aa13.29□□□□□ -0.28
CENPF-203ENST00000467765 RB1CC1Q8TDY2 1594 aa13.27□□□□□ -0.29
CENPF-203ENST00000467765 MYO15BQ96JP2 1530 aa13.26□□□□□ -0.29
CENPF-203ENST00000467765 SSUH2Q9Y2M2 353 aa13.24□□□□□ -0.29
CENPF-203ENST00000467765 CD44P16070 742 aaKnown RBP13.22□□□□□ -0.29
CENPF-203ENST00000467765 ZNF692Q9BU19 519 aaPredicted RBP13.22□□□□□ -0.29
CENPF-203ENST00000467765 CLCN6P51797 869 aa13.22□□□□□ -0.29
CENPF-203ENST00000467765 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
CENPF-203ENST00000467765 DCBLD2Q96PD2 775 aa13.19□□□□□ -0.3
CENPF-203ENST00000467765 POTEMA6NI47 508 aa13.17□□□□□ -0.3
CENPF-203ENST00000467765 OTUD5Q96G74 571 aa13.14□□□□□ -0.31
CENPF-203ENST00000467765 PABPN1Q86U42 306 aaKnown RBP eCLIP13.13□□□□□ -0.31
CENPF-203ENST00000467765 MKRN4PQ13434 485 aaPredicted RBP13.12□□□□□ -0.31
CENPF-203ENST00000467765 POTEGQ6S5H5 508 aa13.1□□□□□ -0.31
CENPF-203ENST00000467765 FARP1Q9Y4F1 1045 aaPredicted RBP13.09□□□□□ -0.31
CENPF-203ENST00000467765 ZBTB22O15209 634 aa13.07□□□□□ -0.32
CENPF-203ENST00000467765 ATXN8OSP0DMR3 200 aa13.07□□□□□ -0.32
CENPF-203ENST00000467765 NACADO15069 1562 aa13.05□□□□□ -0.32
CENPF-203ENST00000467765 POTEB2H3BUK9 544 aa13.03□□□□□ -0.32
CENPF-203ENST00000467765 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
CENPF-203ENST00000467765 CECR2Q9BXF3 1484 aa12.99□□□□□ -0.33
CENPF-203ENST00000467765 ZNF579Q8NAF0 562 aaKnown RBP12.98□□□□□ -0.33
CENPF-203ENST00000467765 UNC13AQ9UPW8 1703 aa12.93□□□□□ -0.34
CENPF-203ENST00000467765 SHROOM4Q9ULL8 1493 aa12.92□□□□□ -0.34
CENPF-203ENST00000467765 ZRANB1Q9UGI0 708 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 235.5 ms