RNA–Protein interactions for RNA: ENST00000462818.1

STAG1-204, Transcript of stromal antigen 1, humanhuman

TSL 3

Gene STAG1, Length 1,227 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-204ENST00000462818 AEBP2Q6ZN18 517 aaPredicted RBP26.05■■□□□ 1.76
STAG1-204ENST00000462818 CHIC1Q5VXU3 224 aa24.56■■□□□ 1.52
STAG1-204ENST00000462818 SENP3Q9H4L4 574 aaPredicted RBP22.26■■□□□ 1.15
STAG1-204ENST00000462818 PHF23Q9BUL5 403 aaPredicted RBP21.93■■□□□ 1.1
STAG1-204ENST00000462818 FOXD1Q16676 465 aa20.76■□□□□ 0.91
STAG1-204ENST00000462818 PLPPR3Q6T4P5 718 aa19.54■□□□□ 0.72
STAG1-204ENST00000462818 MSH5O43196 834 aa19.51■□□□□ 0.71
STAG1-204ENST00000462818 PIAS4Q8N2W9 510 aaPredicted RBP19.37■□□□□ 0.69
STAG1-204ENST00000462818 POTEDQ86YR6 584 aa19.35■□□□□ 0.69
STAG1-204ENST00000462818 PPP6R1Q9UPN7 881 aa19.26■□□□□ 0.67
STAG1-204ENST00000462818 ADRA2BP18089 450 aa19.2■□□□□ 0.66
STAG1-204ENST00000462818 MAPK8IP2Q13387 824 aaPredicted RBP17.69■□□□□ 0.42
STAG1-204ENST00000462818 DMRT2Q9Y5R5 561 aa17.62■□□□□ 0.41
STAG1-204ENST00000462818 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
STAG1-204ENST00000462818 PPP4R3CPQ6ZMV5 832 aa17.11■□□□□ 0.33
STAG1-204ENST00000462818 DCAF8L1A6NGE4 600 aa16.92■□□□□ 0.3
STAG1-204ENST00000462818 HOXD11P31277 338 aaPredicted RBP16.89■□□□□ 0.29
STAG1-204ENST00000462818 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
STAG1-204ENST00000462818 CNKSR2Q8WXI2 1034 aa16.83■□□□□ 0.28
STAG1-204ENST00000462818 RNF216Q9NWF9 866 aaPredicted RBP16.72■□□□□ 0.27
STAG1-204ENST00000462818 RNF39Q9H2S5 420 aa16.62■□□□□ 0.25
STAG1-204ENST00000462818 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
STAG1-204ENST00000462818 C1QBPQ07021 282 aaKnown RBP16.36■□□□□ 0.21
STAG1-204ENST00000462818 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
STAG1-204ENST00000462818 NPM3O75607 178 aaKnown RBP16.16■□□□□ 0.18
STAG1-204ENST00000462818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.11■□□□□ 0.173e-10■■■□□ 18
STAG1-204ENST00000462818 U3KPZ7 1027 aaPredicted RBP15.75■□□□□ 0.11
STAG1-204ENST00000462818 KCNA4P22459 653 aa15.68■□□□□ 0.1
STAG1-204ENST00000462818 SPINK5Q9NQ38 1064 aaPredicted RBP15.58■□□□□ 0.08
STAG1-204ENST00000462818 CAPN15O75808 1086 aa15.57■□□□□ 0.08
STAG1-204ENST00000462818 DSG3P32926 999 aa15.5■□□□□ 0.07
STAG1-204ENST00000462818 SLC4A2P04920 1241 aa15.47■□□□□ 0.07
STAG1-204ENST00000462818 APLP2Q06481 763 aa15.3■□□□□ 0.04
STAG1-204ENST00000462818 TRHP20396 242 aaPredicted RBP15.27■□□□□ 0.04
STAG1-204ENST00000462818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.23■□□□□ 0.03
STAG1-204ENST00000462818 HNRNPUL2Q1KMD3 747 aaKnown RBP15.23■□□□□ 0.03
STAG1-204ENST00000462818 ZNF219Q9P2Y4 722 aaPredicted RBP15.23■□□□□ 0.03
STAG1-204ENST00000462818 ABCB7O75027 752 aa15.19■□□□□ 0.02
STAG1-204ENST00000462818 POTEHQ6S545 545 aa15.13■□□□□ 0.01
STAG1-204ENST00000462818 SAMD1Q6SPF0 538 aaPredicted RBP15.13■□□□□ 0.01
STAG1-204ENST00000462818 MYCNP04198 464 aaPredicted RBP14.96□□□□□ -0.01
STAG1-204ENST00000462818 POLA2Q14181 598 aa14.81□□□□□ -0.04
STAG1-204ENST00000462818 RBM42Q9BTD8 480 aaKnown RBP14.81□□□□□ -0.04
STAG1-204ENST00000462818 SLC4A1APQ9BWU0 796 aaKnown RBP14.78□□□□□ -0.04
STAG1-204ENST00000462818 FOXD4L1Q9NU39 408 aa14.7□□□□□ -0.06
STAG1-204ENST00000462818 ATF5Q9Y2D1 282 aaPredicted RBP14.62□□□□□ -0.07
STAG1-204ENST00000462818 CHRDL2Q6WN34 429 aa14.55□□□□□ -0.08
STAG1-204ENST00000462818 ZBTB12Q9Y330 459 aaPredicted RBP14.5□□□□□ -0.09
STAG1-204ENST00000462818 AKT1S1Q96B36 256 aa14.43□□□□□ -0.1
STAG1-204ENST00000462818 ZBTB22O15209 634 aa14.41□□□□□ -0.1
STAG1-204ENST00000462818 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
STAG1-204ENST00000462818 REM2Q8IYK8 340 aaPredicted RBP14.29□□□□□ -0.12
STAG1-204ENST00000462818 ATXN8OSP0DMR3 200 aa14.26□□□□□ -0.13
STAG1-204ENST00000462818 PIP4P2Q8N4L2 257 aa14.17□□□□□ -0.14
STAG1-204ENST00000462818 PITPNM1O00562 1244 aa14.15□□□□□ -0.14
STAG1-204ENST00000462818 SP7Q8TDD2 431 aaPredicted RBP14.1□□□□□ -0.15
STAG1-204ENST00000462818 FBLN2P98095 1184 aa14.07□□□□□ -0.16
STAG1-204ENST00000462818 FXR2P51116 673 aaKnown RBP eCLIP14.05□□□□□ -0.16
STAG1-204ENST00000462818 SPDYE2BA6NHP3 402 aa14.04□□□□□ -0.16
STAG1-204ENST00000462818 SPDYE6P0CI01 402 aa14.04□□□□□ -0.16
STAG1-204ENST00000462818 SPDYE2Q495Y8 402 aa14.04□□□□□ -0.16
STAG1-204ENST00000462818 HAX1O00165 279 aa13.97□□□□□ -0.17
STAG1-204ENST00000462818 MKRN4PQ13434 485 aaPredicted RBP13.93□□□□□ -0.18
STAG1-204ENST00000462818 NISCHQ9Y2I1 1504 aa13.92□□□□□ -0.18
STAG1-204ENST00000462818 ZNF692Q9BU19 519 aaPredicted RBP13.84□□□□□ -0.19
STAG1-204ENST00000462818 SPDYE1Q8NFV5 336 aaPredicted RBP13.83□□□□□ -0.2
STAG1-204ENST00000462818 CLEC11AQ9Y240 323 aa13.83□□□□□ -0.2
STAG1-204ENST00000462818 SSUH2Q9Y2M2 353 aa13.82□□□□□ -0.2
STAG1-204ENST00000462818 PRKAR2AP13861 404 aaKnown RBP13.78□□□□□ -0.2
STAG1-204ENST00000462818 EVX2Q03828 476 aa13.77□□□□□ -0.21
STAG1-204ENST00000462818 CSRNP3Q8WYN3 585 aa13.67□□□□□ -0.22
STAG1-204ENST00000462818 PABPN1Q86U42 306 aaKnown RBP eCLIP13.63□□□□□ -0.23
STAG1-204ENST00000462818 C19orf67A6NJJ6 358 aa13.62□□□□□ -0.23
STAG1-204ENST00000462818 EHMT2Q96KQ7 1210 aa13.62□□□□□ -0.23
STAG1-204ENST00000462818 CHADLQ6NUI6 762 aa13.59□□□□□ -0.23
STAG1-204ENST00000462818 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
STAG1-204ENST00000462818 GABBR2O75899 941 aa13.45□□□□□ -0.26
STAG1-204ENST00000462818 FARP1Q9Y4F1 1045 aaPredicted RBP13.36□□□□□ -0.27
STAG1-204ENST00000462818 CD44P16070 742 aaKnown RBP13.33□□□□□ -0.28
STAG1-204ENST00000462818 LHX8Q68G74 356 aa13.22□□□□□ -0.29
STAG1-204ENST00000462818 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
STAG1-204ENST00000462818 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
STAG1-204ENST00000462818 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
STAG1-204ENST00000462818 CLCN6P51797 869 aa13.17□□□□□ -0.3
STAG1-204ENST00000462818 POTEIP0CG38 1075 aa13.16□□□□□ -0.3
STAG1-204ENST00000462818 ZNF579Q8NAF0 562 aaKnown RBP13.11□□□□□ -0.31
STAG1-204ENST00000462818 ZRANB1Q9UGI0 708 aa13.11□□□□□ -0.31
STAG1-204ENST00000462818 DCBLD2Q96PD2 775 aa13.07□□□□□ -0.32
STAG1-204ENST00000462818 PAK3O75914 559 aaPredicted RBP12.97□□□□□ -0.33
STAG1-204ENST00000462818 GALR2O43603 387 aaPredicted RBP12.96□□□□□ -0.33
STAG1-204ENST00000462818 NPM1P06748 294 aaKnown RBP eCLIP12.95□□□□□ -0.34
STAG1-204ENST00000462818 PHF12Q96QT6 1004 aa12.93□□□□□ -0.34
STAG1-204ENST00000462818 MNX1P50219 401 aaPredicted RBP12.92□□□□□ -0.34
STAG1-204ENST00000462818 PROM2Q8N271 834 aa12.83□□□□□ -0.36
STAG1-204ENST00000462818 ABCC9O60706 1549 aa12.77□□□□□ -0.37
STAG1-204ENST00000462818 MS4A3Q96HJ5 214 aa12.74□□□□□ -0.37
STAG1-204ENST00000462818 POTEB2H3BUK9 544 aa12.73□□□□□ -0.37
STAG1-204ENST00000462818 PELP1Q8IZL8 1130 aaKnown RBP12.73□□□□□ -0.37
STAG1-204ENST00000462818 OTUD5Q96G74 571 aa12.71□□□□□ -0.37
STAG1-204ENST00000462818 TSPYL2Q9H2G4 693 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms