RNA–Protein interactions for RNA: ENST00000461859.1

TUFT1-205, Transcript of tuftelin 1, humanhuman

TSL 2

Gene TUFT1, Length 749 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUFT1-205ENST00000461859 AEBP2Q6ZN18 517 aaPredicted RBP28.23■■■□□ 2.11
TUFT1-205ENST00000461859 CHIC1Q5VXU3 224 aa27.27■■□□□ 1.96
TUFT1-205ENST00000461859 SENP3Q9H4L4 574 aaPredicted RBP24.21■■□□□ 1.47
TUFT1-205ENST00000461859 PHF23Q9BUL5 403 aaPredicted RBP23.86■■□□□ 1.41
TUFT1-205ENST00000461859 FOXD1Q16676 465 aa22.4■■□□□ 1.18
TUFT1-205ENST00000461859 PLPPR3Q6T4P5 718 aa22.02■■□□□ 1.12
TUFT1-205ENST00000461859 PPP6R1Q9UPN7 881 aa21.15■□□□□ 0.98
TUFT1-205ENST00000461859 ADRA2BP18089 450 aa21.14■□□□□ 0.97
TUFT1-205ENST00000461859 PIAS4Q8N2W9 510 aaPredicted RBP21.09■□□□□ 0.97
TUFT1-205ENST00000461859 MSH5O43196 834 aa20.98■□□□□ 0.95
TUFT1-205ENST00000461859 POTEDQ86YR6 584 aa19.73■□□□□ 0.75
TUFT1-205ENST00000461859 SCAF1Q9H7N4 1312 aaKnown RBP19.55■□□□□ 0.72
TUFT1-205ENST00000461859 PPP4R3CPQ6ZMV5 832 aa19.29■□□□□ 0.68
TUFT1-205ENST00000461859 MAPK8IP2Q13387 824 aaPredicted RBP19.27■□□□□ 0.68
TUFT1-205ENST00000461859 DMRT2Q9Y5R5 561 aa19.21■□□□□ 0.67
TUFT1-205ENST00000461859 CNKSR2Q8WXI2 1034 aa18.9■□□□□ 0.62
TUFT1-205ENST00000461859 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
TUFT1-205ENST00000461859 HOXD11P31277 338 aaPredicted RBP18.64■□□□□ 0.57
TUFT1-205ENST00000461859 RNF216Q9NWF9 866 aaPredicted RBP18.63■□□□□ 0.57
TUFT1-205ENST00000461859 DCAF8L1A6NGE4 600 aa18.42■□□□□ 0.54
TUFT1-205ENST00000461859 NPM3O75607 178 aaKnown RBP18.36■□□□□ 0.53
TUFT1-205ENST00000461859 KCNA4P22459 653 aa18.3■□□□□ 0.52
TUFT1-205ENST00000461859 DNAJC5BQ9UF47 199 aa18.02■□□□□ 0.48
TUFT1-205ENST00000461859 RNF39Q9H2S5 420 aa17.85■□□□□ 0.45
TUFT1-205ENST00000461859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.81■□□□□ 0.44
TUFT1-205ENST00000461859 CACNB1Q02641 598 aaPredicted RBP17.73■□□□□ 0.43
TUFT1-205ENST00000461859 C1QBPQ07021 282 aaKnown RBP17.68■□□□□ 0.42
TUFT1-205ENST00000461859 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
TUFT1-205ENST00000461859 SLC4A2P04920 1241 aa17.4■□□□□ 0.38
TUFT1-205ENST00000461859 U3KPZ7 1027 aaPredicted RBP17.39■□□□□ 0.37
TUFT1-205ENST00000461859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.21■□□□□ 0.35
TUFT1-205ENST00000461859 HNRNPUL2Q1KMD3 747 aaKnown RBP17.21■□□□□ 0.35
TUFT1-205ENST00000461859 APLP2Q06481 763 aa17.18■□□□□ 0.34
TUFT1-205ENST00000461859 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
TUFT1-205ENST00000461859 MYCNP04198 464 aaPredicted RBP17.07■□□□□ 0.32
TUFT1-205ENST00000461859 FOXD4L1Q9NU39 408 aa17.06■□□□□ 0.32
TUFT1-205ENST00000461859 CAPN15O75808 1086 aa17.05■□□□□ 0.32
TUFT1-205ENST00000461859 SPINK5Q9NQ38 1064 aaPredicted RBP17■□□□□ 0.31
TUFT1-205ENST00000461859 ZNF219Q9P2Y4 722 aaPredicted RBP16.91■□□□□ 0.3
TUFT1-205ENST00000461859 TRHP20396 242 aaPredicted RBP16.84■□□□□ 0.29
TUFT1-205ENST00000461859 DSG3P32926 999 aa16.82■□□□□ 0.28
TUFT1-205ENST00000461859 ZBTB22O15209 634 aa16.76■□□□□ 0.27
TUFT1-205ENST00000461859 ABCB7O75027 752 aa16.62■□□□□ 0.25
TUFT1-205ENST00000461859 ATXN8OSP0DMR3 200 aa16.55■□□□□ 0.24
TUFT1-205ENST00000461859 ATF5Q9Y2D1 282 aaPredicted RBP16.47■□□□□ 0.23
TUFT1-205ENST00000461859 POLA2Q14181 598 aa16.46■□□□□ 0.23
TUFT1-205ENST00000461859 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
TUFT1-205ENST00000461859 EHMT2Q96KQ7 1210 aa16.37■□□□□ 0.21
TUFT1-205ENST00000461859 ZBTB12Q9Y330 459 aaPredicted RBP16.3■□□□□ 0.2
TUFT1-205ENST00000461859 RBM42Q9BTD8 480 aaKnown RBP16.18■□□□□ 0.18
TUFT1-205ENST00000461859 FBLN2P98095 1184 aa16.02■□□□□ 0.16
TUFT1-205ENST00000461859 OSCARQ8IYS5 282 aa15.91■□□□□ 0.14
TUFT1-205ENST00000461859 AKT1S1Q96B36 256 aa15.83■□□□□ 0.12
TUFT1-205ENST00000461859 NISCHQ9Y2I1 1504 aa15.81■□□□□ 0.12
TUFT1-205ENST00000461859 SPDYE2BA6NHP3 402 aa15.76■□□□□ 0.11
TUFT1-205ENST00000461859 SPDYE6P0CI01 402 aa15.76■□□□□ 0.11
TUFT1-205ENST00000461859 MKRN4PQ13434 485 aaPredicted RBP15.76■□□□□ 0.11
TUFT1-205ENST00000461859 SPDYE2Q495Y8 402 aa15.76■□□□□ 0.11
TUFT1-205ENST00000461859 REM2Q8IYK8 340 aaPredicted RBP15.61■□□□□ 0.09
TUFT1-205ENST00000461859 ZNF692Q9BU19 519 aaPredicted RBP15.6■□□□□ 0.09
TUFT1-205ENST00000461859 CHRDL2Q6WN34 429 aa15.58■□□□□ 0.08
TUFT1-205ENST00000461859 POTEHQ6S545 545 aa15.57■□□□□ 0.08
TUFT1-205ENST00000461859 SSUH2Q9Y2M2 353 aa15.52■□□□□ 0.08
TUFT1-205ENST00000461859 PITPNM1O00562 1244 aa15.43■□□□□ 0.06
TUFT1-205ENST00000461859 SPDYE1Q8NFV5 336 aaPredicted RBP15.41■□□□□ 0.06
TUFT1-205ENST00000461859 PABPN1Q86U42 306 aaKnown RBP eCLIP15.35■□□□□ 0.05
TUFT1-205ENST00000461859 CLEC11AQ9Y240 323 aa15.31■□□□□ 0.04
TUFT1-205ENST00000461859 SPDYE4A6NLX3 237 aa15.3■□□□□ 0.04
TUFT1-205ENST00000461859 PIP4P2Q8N4L2 257 aa15.25■□□□□ 0.03
TUFT1-205ENST00000461859 FXR2P51116 673 aaKnown RBP eCLIP15.24■□□□□ 0.03
TUFT1-205ENST00000461859 PRR29P0C7W0 189 aa15.14■□□□□ 0.01
TUFT1-205ENST00000461859 STAG3Q9UJ98 1225 aa15.12■□□□□ 0.01
TUFT1-205ENST00000461859 PRKAR2AP13861 404 aaKnown RBP15.06■□□□□ 0
TUFT1-205ENST00000461859 PROM2Q8N271 834 aa14.95□□□□□ -0.02
TUFT1-205ENST00000461859 HAX1O00165 279 aa14.93□□□□□ -0.02
TUFT1-205ENST00000461859 CHADLQ6NUI6 762 aa14.9□□□□□ -0.02
TUFT1-205ENST00000461859 FKBP8Q14318 412 aa14.88□□□□□ -0.03
TUFT1-205ENST00000461859 FARP1Q9Y4F1 1045 aaPredicted RBP14.79□□□□□ -0.04
TUFT1-205ENST00000461859 SP7Q8TDD2 431 aaPredicted RBP14.78□□□□□ -0.04
TUFT1-205ENST00000461859 CREBZFQ9NS37 354 aa14.77□□□□□ -0.05
TUFT1-205ENST00000461859 C19orf67A6NJJ6 358 aa14.73□□□□□ -0.05
TUFT1-205ENST00000461859 PLEKHG5O94827 1062 aa14.68□□□□□ -0.06
TUFT1-205ENST00000461859 NPM1P06748 294 aaKnown RBP eCLIP14.65□□□□□ -0.06
TUFT1-205ENST00000461859 CD44P16070 742 aaKnown RBP14.62□□□□□ -0.07
TUFT1-205ENST00000461859 EVX2Q03828 476 aa14.61□□□□□ -0.07
TUFT1-205ENST00000461859 FBXO3Q9UK99 471 aa14.6□□□□□ -0.07
TUFT1-205ENST00000461859 MIER1Q8N108 512 aa14.57□□□□□ -0.08
TUFT1-205ENST00000461859 PAK3O75914 559 aaPredicted RBP14.55□□□□□ -0.08
TUFT1-205ENST00000461859 MNX1P50219 401 aaPredicted RBP14.53□□□□□ -0.08
TUFT1-205ENST00000461859 PLCD3Q8N3E9 789 aa14.53□□□□□ -0.08
TUFT1-205ENST00000461859 CLCN6P51797 869 aa14.5□□□□□ -0.09
TUFT1-205ENST00000461859 ZBTB47Q9UFB7 747 aaPredicted RBP14.5□□□□□ -0.09
TUFT1-205ENST00000461859 ZRANB1Q9UGI0 708 aa14.47□□□□□ -0.09
TUFT1-205ENST00000461859 GABBR2O75899 941 aa14.42□□□□□ -0.1
TUFT1-205ENST00000461859 ZNF579Q8NAF0 562 aaKnown RBP14.42□□□□□ -0.1
TUFT1-205ENST00000461859 VASPP50552 380 aaPredicted RBP14.31□□□□□ -0.12
TUFT1-205ENST00000461859 ABCC9O60706 1549 aa14.3□□□□□ -0.12
TUFT1-205ENST00000461859 TSPYL2Q9H2G4 693 aaPredicted RBP14.28□□□□□ -0.12
TUFT1-205ENST00000461859 CCDC180Q9P1Z9 1646 aa14.27□□□□□ -0.12
TUFT1-205ENST00000461859 PHF12Q96QT6 1004 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms