RNA–Protein interactions for RNA: ENST00000461696.1

ANKRD28-206, Transcript of ankyrin repeat domain 28, humanhuman

TSL 3

Gene ANKRD28, Length 1,878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-206ENST00000461696 AEBP2Q6ZN18 517 aaPredicted RBP19.18■□□□□ 0.66
ANKRD28-206ENST00000461696 CHIC1Q5VXU3 224 aa18.54■□□□□ 0.56
ANKRD28-206ENST00000461696 PHF23Q9BUL5 403 aaPredicted RBP16.31■□□□□ 0.2
ANKRD28-206ENST00000461696 SENP3Q9H4L4 574 aaPredicted RBP16.31■□□□□ 0.2
ANKRD28-206ENST00000461696 POTEDQ86YR6 584 aa15.31■□□□□ 0.04
ANKRD28-206ENST00000461696 FOXD1Q16676 465 aa15.16■□□□□ 0.02
ANKRD28-206ENST00000461696 PLPPR3Q6T4P5 718 aa15.01□□□□□ -0.01
ANKRD28-206ENST00000461696 ADRA2BP18089 450 aa14.48□□□□□ -0.09
ANKRD28-206ENST00000461696 PPP6R1Q9UPN7 881 aa14.47□□□□□ -0.09
ANKRD28-206ENST00000461696 PIAS4Q8N2W9 510 aaPredicted RBP14.32□□□□□ -0.12
ANKRD28-206ENST00000461696 MSH5O43196 834 aa14.04□□□□□ -0.16
ANKRD28-206ENST00000461696 PPP4R3CPQ6ZMV5 832 aa13.21□□□□□ -0.29
ANKRD28-206ENST00000461696 SCAF1Q9H7N4 1312 aaKnown RBP13.21□□□□□ -0.29
ANKRD28-206ENST00000461696 MAPK8IP2Q13387 824 aaPredicted RBP13.19□□□□□ -0.3
ANKRD28-206ENST00000461696 DMRT2Q9Y5R5 561 aa12.96□□□□□ -0.33
ANKRD28-206ENST00000461696 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
ANKRD28-206ENST00000461696 NCBP3Q53F19 620 aaKnown RBP12.81□□□□□ -0.36
ANKRD28-206ENST00000461696 KCNA4P22459 653 aa12.74□□□□□ -0.37
ANKRD28-206ENST00000461696 RNF216Q9NWF9 866 aaPredicted RBP12.63□□□□□ -0.39
ANKRD28-206ENST00000461696 NPM3O75607 178 aaKnown RBP12.63□□□□□ -0.39
ANKRD28-206ENST00000461696 HOXD11P31277 338 aaPredicted RBP12.61□□□□□ -0.39
ANKRD28-206ENST00000461696 DCAF8L1A6NGE4 600 aa12.59□□□□□ -0.39
ANKRD28-206ENST00000461696 CACNB1Q02641 598 aaPredicted RBP12.58□□□□□ -0.4
ANKRD28-206ENST00000461696 NISCHQ9Y2I1 1504 aa12.42□□□□□ -0.42
ANKRD28-206ENST00000461696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.12□□□□□ -0.47
ANKRD28-206ENST00000461696 DNAJC5BQ9UF47 199 aa12.11□□□□□ -0.47
ANKRD28-206ENST00000461696 SLC4A1APQ9BWU0 796 aaKnown RBP12.1□□□□□ -0.47
ANKRD28-206ENST00000461696 RNF39Q9H2S5 420 aa12□□□□□ -0.49
ANKRD28-206ENST00000461696 SLC4A2P04920 1241 aa11.95□□□□□ -0.5
ANKRD28-206ENST00000461696 U3KPZ7 1027 aaPredicted RBP11.86□□□□□ -0.51
ANKRD28-206ENST00000461696 C1QBPQ07021 282 aaKnown RBP11.85□□□□□ -0.51
ANKRD28-206ENST00000461696 POTEHQ6S545 545 aa11.81□□□□□ -0.52
ANKRD28-206ENST00000461696 FOXD4L1Q9NU39 408 aa11.74□□□□□ -0.53
ANKRD28-206ENST00000461696 ZBTB22O15209 634 aa11.7□□□□□ -0.54
ANKRD28-206ENST00000461696 MYCNP04198 464 aaPredicted RBP11.67□□□□□ -0.54
ANKRD28-206ENST00000461696 EHMT2Q96KQ7 1210 aa11.66□□□□□ -0.54
ANKRD28-206ENST00000461696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.63□□□□□ -0.55
ANKRD28-206ENST00000461696 HNRNPUL2Q1KMD3 747 aaKnown RBP11.63□□□□□ -0.55
ANKRD28-206ENST00000461696 CAPN15O75808 1086 aa11.62□□□□□ -0.55
ANKRD28-206ENST00000461696 SPINK5Q9NQ38 1064 aaPredicted RBP11.62□□□□□ -0.55
ANKRD28-206ENST00000461696 SAMD1Q6SPF0 538 aaPredicted RBP11.59□□□□□ -0.55
ANKRD28-206ENST00000461696 APLP2Q06481 763 aa11.55□□□□□ -0.56
ANKRD28-206ENST00000461696 TRHP20396 242 aaPredicted RBP11.53□□□□□ -0.56
ANKRD28-206ENST00000461696 CSRNP3Q8WYN3 585 aa11.48□□□□□ -0.57
ANKRD28-206ENST00000461696 ZNF219Q9P2Y4 722 aaPredicted RBP11.44□□□□□ -0.58
ANKRD28-206ENST00000461696 ABCB7O75027 752 aa11.4□□□□□ -0.59
ANKRD28-206ENST00000461696 ATF5Q9Y2D1 282 aaPredicted RBP11.39□□□□□ -0.59
ANKRD28-206ENST00000461696 DSG3P32926 999 aa11.38□□□□□ -0.59
ANKRD28-206ENST00000461696 ATXN8OSP0DMR3 200 aa11.28□□□□□ -0.6
ANKRD28-206ENST00000461696 POLA2Q14181 598 aa11.27□□□□□ -0.61
ANKRD28-206ENST00000461696 CCDC180Q9P1Z9 1646 aa11.11□□□□□ -0.63
ANKRD28-206ENST00000461696 ZBTB12Q9Y330 459 aaPredicted RBP11□□□□□ -0.65
ANKRD28-206ENST00000461696 ABCC9O60706 1549 aa10.94□□□□□ -0.66
ANKRD28-206ENST00000461696 FBLN2P98095 1184 aa10.93□□□□□ -0.66
ANKRD28-206ENST00000461696 OSCARQ8IYS5 282 aa10.9□□□□□ -0.66
ANKRD28-206ENST00000461696 MKRN4PQ13434 485 aaPredicted RBP10.86□□□□□ -0.67
ANKRD28-206ENST00000461696 RBM42Q9BTD8 480 aaKnown RBP10.86□□□□□ -0.67
ANKRD28-206ENST00000461696 SPDYE2BA6NHP3 402 aa10.7□□□□□ -0.7
ANKRD28-206ENST00000461696 SPDYE6P0CI01 402 aa10.7□□□□□ -0.7
ANKRD28-206ENST00000461696 SPDYE2Q495Y8 402 aa10.7□□□□□ -0.7
ANKRD28-206ENST00000461696 ZNF692Q9BU19 519 aaPredicted RBP10.69□□□□□ -0.7
ANKRD28-206ENST00000461696 AKT1S1Q96B36 256 aa10.66□□□□□ -0.7
ANKRD28-206ENST00000461696 REM2Q8IYK8 340 aaPredicted RBP10.59□□□□□ -0.71
ANKRD28-206ENST00000461696 SP7Q8TDD2 431 aaPredicted RBP10.59□□□□□ -0.71
ANKRD28-206ENST00000461696 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
ANKRD28-206ENST00000461696 SSUH2Q9Y2M2 353 aa10.57□□□□□ -0.72
ANKRD28-206ENST00000461696 RB1CC1Q8TDY2 1594 aa10.54□□□□□ -0.72
ANKRD28-206ENST00000461696 DCAF8L2P0C7V8 631 aa10.54□□□□□ -0.72
ANKRD28-206ENST00000461696 PABPN1Q86U42 306 aaKnown RBP eCLIP10.54□□□□□ -0.72
ANKRD28-206ENST00000461696 NACADO15069 1562 aa10.5□□□□□ -0.73
ANKRD28-206ENST00000461696 CHRDL2Q6WN34 429 aa10.5□□□□□ -0.73
ANKRD28-206ENST00000461696 CLEC11AQ9Y240 323 aa10.5□□□□□ -0.73
ANKRD28-206ENST00000461696 PITPNM1O00562 1244 aa10.49□□□□□ -0.73
ANKRD28-206ENST00000461696 FKBP8Q14318 412 aa10.45□□□□□ -0.74
ANKRD28-206ENST00000461696 SPDYE1Q8NFV5 336 aaPredicted RBP10.44□□□□□ -0.74
ANKRD28-206ENST00000461696 MYO15BQ96JP2 1530 aa10.39□□□□□ -0.75
ANKRD28-206ENST00000461696 PRR29P0C7W0 189 aa10.33□□□□□ -0.76
ANKRD28-206ENST00000461696 PIP4P2Q8N4L2 257 aa10.32□□□□□ -0.76
ANKRD28-206ENST00000461696 DCAF1Q9Y4B6 1507 aa10.3□□□□□ -0.76
ANKRD28-206ENST00000461696 ZCCHC6Q5VYS8 1495 aaKnown RBP10.28□□□□□ -0.76
ANKRD28-206ENST00000461696 STAG3Q9UJ98 1225 aa10.27□□□□□ -0.76
ANKRD28-206ENST00000461696 FXR2P51116 673 aaKnown RBP eCLIP10.27□□□□□ -0.77
ANKRD28-206ENST00000461696 PROM2Q8N271 834 aa10.25□□□□□ -0.77
ANKRD28-206ENST00000461696 PRKAR2AP13861 404 aaKnown RBP10.25□□□□□ -0.77
ANKRD28-206ENST00000461696 CHADLQ6NUI6 762 aa10.24□□□□□ -0.77
ANKRD28-206ENST00000461696 UNC13AQ9UPW8 1703 aa10.21□□□□□ -0.77
ANKRD28-206ENST00000461696 PLSCR2Q9NRY7 297 aa10.17□□□□□ -0.78
ANKRD28-206ENST00000461696 SHROOM4Q9ULL8 1493 aa10.12□□□□□ -0.79
ANKRD28-206ENST00000461696 BICRAQ9NZM4 1560 aa10.11□□□□□ -0.79
ANKRD28-206ENST00000461696 HAX1O00165 279 aa10.1□□□□□ -0.79
ANKRD28-206ENST00000461696 CREBZFQ9NS37 354 aa10.1□□□□□ -0.79
ANKRD28-206ENST00000461696 MIER1Q8N108 512 aa10.08□□□□□ -0.8
ANKRD28-206ENST00000461696 FBXO3Q9UK99 471 aa10.07□□□□□ -0.8
ANKRD28-206ENST00000461696 SCRIBQ14160 1630 aa10.07□□□□□ -0.8
ANKRD28-206ENST00000461696 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
ANKRD28-206ENST00000461696 FARP1Q9Y4F1 1045 aaPredicted RBP10.06□□□□□ -0.8
ANKRD28-206ENST00000461696 PLEKHG5O94827 1062 aa10.04□□□□□ -0.8
ANKRD28-206ENST00000461696 VASPP50552 380 aaPredicted RBP9.96□□□□□ -0.82
ANKRD28-206ENST00000461696 NPM1P06748 294 aaKnown RBP eCLIP9.95□□□□□ -0.82
ANKRD28-206ENST00000461696 MNX1P50219 401 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms