RNA–Protein interactions for RNA: ENST00000454083.1

SPATA13-208, Transcript of spermatogenesis associated 13, humanhuman

TSL 3

Gene SPATA13, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA13-208ENST00000454083 AEBP2Q6ZN18 517 aaPredicted RBP38.12■■■■□ 3.69
SPATA13-208ENST00000454083 CHIC1Q5VXU3 224 aa36.57■■■■□ 3.44
SPATA13-208ENST00000454083 SENP3Q9H4L4 574 aaPredicted RBP32.36■■■□□ 2.77
SPATA13-208ENST00000454083 PHF23Q9BUL5 403 aaPredicted RBP32.13■■■□□ 2.73
SPATA13-208ENST00000454083 FOXD1Q16676 465 aa30.16■■■□□ 2.42
SPATA13-208ENST00000454083 PLPPR3Q6T4P5 718 aa29.37■■■□□ 2.29
SPATA13-208ENST00000454083 PPP6R1Q9UPN7 881 aa28.54■■■□□ 2.16
SPATA13-208ENST00000454083 ADRA2BP18089 450 aa28.43■■■□□ 2.14
SPATA13-208ENST00000454083 PIAS4Q8N2W9 510 aaPredicted RBP28.22■■■□□ 2.11
SPATA13-208ENST00000454083 MSH5O43196 834 aa28.01■■■□□ 2.07
SPATA13-208ENST00000454083 NISCHQ9Y2I1 1504 aa27.39■■□□□ 1.98
SPATA13-208ENST00000454083 POTEDQ86YR6 584 aa26.66■■□□□ 1.86
SPATA13-208ENST00000454083 MAPK8IP2Q13387 824 aaPredicted RBP26■■□□□ 1.75
SPATA13-208ENST00000454083 SCAF1Q9H7N4 1312 aaKnown RBP25.93■■□□□ 1.74
SPATA13-208ENST00000454083 PPP4R3CPQ6ZMV5 832 aa25.8■■□□□ 1.72
SPATA13-208ENST00000454083 DMRT2Q9Y5R5 561 aa25.77■■□□□ 1.72
SPATA13-208ENST00000454083 CNKSR2Q8WXI2 1034 aa25.22■■□□□ 1.63
SPATA13-208ENST00000454083 HOXD11P31277 338 aaPredicted RBP25.01■■□□□ 1.59
SPATA13-208ENST00000454083 RNF216Q9NWF9 866 aaPredicted RBP24.9■■□□□ 1.58
SPATA13-208ENST00000454083 NCBP3Q53F19 620 aaKnown RBP24.88■■□□□ 1.57
SPATA13-208ENST00000454083 NPM3O75607 178 aaKnown RBP24.61■■□□□ 1.53
SPATA13-208ENST00000454083 DCAF8L1A6NGE4 600 aa24.56■■□□□ 1.52
SPATA13-208ENST00000454083 KCNA4P22459 653 aa24.51■■□□□ 1.51
SPATA13-208ENST00000454083 DNAJC5BQ9UF47 199 aa24.06■■□□□ 1.44
SPATA13-208ENST00000454083 CCDC180Q9P1Z9 1646 aa23.99■■□□□ 1.43
SPATA13-208ENST00000454083 RNF39Q9H2S5 420 aa23.99■■□□□ 1.43
SPATA13-208ENST00000454083 CACNB1Q02641 598 aaPredicted RBP23.74■■□□□ 1.39
SPATA13-208ENST00000454083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.72■■□□□ 1.39
SPATA13-208ENST00000454083 C1QBPQ07021 282 aaKnown RBP23.62■■□□□ 1.37
SPATA13-208ENST00000454083 SLC4A2P04920 1241 aa23.43■■□□□ 1.34
SPATA13-208ENST00000454083 U3KPZ7 1027 aaPredicted RBP23.37■■□□□ 1.33
SPATA13-208ENST00000454083 SLC4A1APQ9BWU0 796 aaKnown RBP23.18■■□□□ 1.3
SPATA13-208ENST00000454083 ABCC9O60706 1549 aa23.16■■□□□ 1.3
SPATA13-208ENST00000454083 DCAF8L2P0C7V8 631 aa23.01■■□□□ 1.27
SPATA13-208ENST00000454083 SPINK5Q9NQ38 1064 aaPredicted RBP22.88■■□□□ 1.25
SPATA13-208ENST00000454083 ZCCHC6Q5VYS8 1495 aaKnown RBP22.87■■□□□ 1.25
SPATA13-208ENST00000454083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.75■■□□□ 1.23
SPATA13-208ENST00000454083 HNRNPUL2Q1KMD3 747 aaKnown RBP22.75■■□□□ 1.23
SPATA13-208ENST00000454083 CAPN15O75808 1086 aa22.74■■□□□ 1.23
SPATA13-208ENST00000454083 FOXD4L1Q9NU39 408 aa22.72■■□□□ 1.23
SPATA13-208ENST00000454083 MYCNP04198 464 aaPredicted RBP22.71■■□□□ 1.23
SPATA13-208ENST00000454083 SAMD1Q6SPF0 538 aaPredicted RBP22.67■■□□□ 1.22
SPATA13-208ENST00000454083 APLP2Q06481 763 aa22.64■■□□□ 1.21
SPATA13-208ENST00000454083 ZBTB22O15209 634 aa22.6■■□□□ 1.21
SPATA13-208ENST00000454083 DSG3P32926 999 aa22.6■■□□□ 1.21
SPATA13-208ENST00000454083 DCAF1Q9Y4B6 1507 aa22.57■■□□□ 1.2
SPATA13-208ENST00000454083 ZNF219Q9P2Y4 722 aaPredicted RBP22.49■■□□□ 1.19
SPATA13-208ENST00000454083 TRHP20396 242 aaPredicted RBP22.48■■□□□ 1.19
SPATA13-208ENST00000454083 NACADO15069 1562 aa22.47■■□□□ 1.19
SPATA13-208ENST00000454083 MYO15BQ96JP2 1530 aa22.42■■□□□ 1.18
SPATA13-208ENST00000454083 RB1CC1Q8TDY2 1594 aa22.39■■□□□ 1.18
SPATA13-208ENST00000454083 ABCB7O75027 752 aa22.29■■□□□ 1.16
SPATA13-208ENST00000454083 SHROOM4Q9ULL8 1493 aa22.24■■□□□ 1.15
SPATA13-208ENST00000454083 ATF5Q9Y2D1 282 aaPredicted RBP22.22■■□□□ 1.15
SPATA13-208ENST00000454083 SCRIBQ14160 1630 aa22.11■■□□□ 1.13
SPATA13-208ENST00000454083 POLA2Q14181 598 aa22■■□□□ 1.11
SPATA13-208ENST00000454083 ATXN8OSP0DMR3 200 aa21.99■■□□□ 1.11
SPATA13-208ENST00000454083 UNC13AQ9UPW8 1703 aa21.94■■□□□ 1.1
SPATA13-208ENST00000454083 CSRNP3Q8WYN3 585 aa21.9■■□□□ 1.1
SPATA13-208ENST00000454083 PABPN1Q86U42 306 aaKnown RBP eCLIP21.86■■□□□ 1.09
SPATA13-208ENST00000454083 EHMT2Q96KQ7 1210 aa21.77■■□□□ 1.08
SPATA13-208ENST00000454083 BICRAQ9NZM4 1560 aa21.71■■□□□ 1.07
SPATA13-208ENST00000454083 ZBTB12Q9Y330 459 aaPredicted RBP21.58■■□□□ 1.05
SPATA13-208ENST00000454083 RBM42Q9BTD8 480 aaKnown RBP21.49■■□□□ 1.03
SPATA13-208ENST00000454083 CECR2Q9BXF3 1484 aa21.37■■□□□ 1.01
SPATA13-208ENST00000454083 OSCARQ8IYS5 282 aa21.32■■□□□ 1
SPATA13-208ENST00000454083 SUPT5HO00267 1087 aaKnown RBP21.26■□□□□ 0.99
SPATA13-208ENST00000454083 MKRN4PQ13434 485 aaPredicted RBP21.23■□□□□ 0.99
SPATA13-208ENST00000454083 FBLN2P98095 1184 aa21.21■□□□□ 0.99
SPATA13-208ENST00000454083 MROH2BQ7Z745 1585 aa21.18■□□□□ 0.98
SPATA13-208ENST00000454083 BAZ1AQ9NRL2 1556 aaPredicted RBP21.16■□□□□ 0.98
SPATA13-208ENST00000454083 RSF1Q96T23 1441 aaPredicted RBP21.13■□□□□ 0.97
SPATA13-208ENST00000454083 SMARCA4P51532 1647 aa21.12■□□□□ 0.97
SPATA13-208ENST00000454083 AKT1S1Q96B36 256 aa21.11■□□□□ 0.97
SPATA13-208ENST00000454083 EIF4G1Q04637 1599 aaKnown RBP21.09■□□□□ 0.97
SPATA13-208ENST00000454083 WIZO95785 1651 aa21■□□□□ 0.95
SPATA13-208ENST00000454083 SPDYE2BA6NHP3 402 aa20.98■□□□□ 0.95
SPATA13-208ENST00000454083 SPDYE6P0CI01 402 aa20.98■□□□□ 0.95
SPATA13-208ENST00000454083 SPDYE2Q495Y8 402 aa20.98■□□□□ 0.95
SPATA13-208ENST00000454083 POTEHQ6S545 545 aa20.95■□□□□ 0.94
SPATA13-208ENST00000454083 REM2Q8IYK8 340 aaPredicted RBP20.92■□□□□ 0.94
SPATA13-208ENST00000454083 CC2D2AQ9P2K1 1620 aa20.9■□□□□ 0.94
SPATA13-208ENST00000454083 ATAD2BQ9ULI0 1458 aa20.89■□□□□ 0.94
SPATA13-208ENST00000454083 CHRDL2Q6WN34 429 aa20.87■□□□□ 0.93
SPATA13-208ENST00000454083 SMARCA2P51531 1590 aa20.84■□□□□ 0.93
SPATA13-208ENST00000454083 PEG3Q9GZU2 1588 aa20.81■□□□□ 0.92
SPATA13-208ENST00000454083 SSUH2Q9Y2M2 353 aa20.81■□□□□ 0.92
SPATA13-208ENST00000454083 BAZ1BQ9UIG0 1483 aaKnown RBP20.76■□□□□ 0.91
SPATA13-208ENST00000454083 ZNF692Q9BU19 519 aaPredicted RBP20.76■□□□□ 0.91
SPATA13-208ENST00000454083 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
SPATA13-208ENST00000454083 PITPNM1O00562 1244 aa20.71■□□□□ 0.91
SPATA13-208ENST00000454083 TOP2AP11388 1531 aaKnown RBP20.7■□□□□ 0.9
SPATA13-208ENST00000454083 HMGXB3Q12766 1538 aa20.63■□□□□ 0.89
SPATA13-208ENST00000454083 CCDC88BA6NC98 1476 aa20.56■□□□□ 0.88
SPATA13-208ENST00000454083 PIP4P2Q8N4L2 257 aa20.49■□□□□ 0.87
SPATA13-208ENST00000454083 SPDYE1Q8NFV5 336 aaPredicted RBP20.48■□□□□ 0.87
SPATA13-208ENST00000454083 FXR2P51116 673 aaKnown RBP eCLIP20.47■□□□□ 0.87
SPATA13-208ENST00000454083 CLEC11AQ9Y240 323 aa20.39■□□□□ 0.85
SPATA13-208ENST00000454083 SPDYE4A6NLX3 237 aa20.36■□□□□ 0.85
SPATA13-208ENST00000454083 CADPSQ9ULU8 1353 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms