RNA–Protein interactions for RNA: ENST00000453037.7

C12orf29-202, Transcript of chromosome 12 open reading frame 29, humanhuman

TSL 2

Gene C12orf29, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf29-202ENST00000453037 AEBP2Q6ZN18 517 aaPredicted RBP30.63■■■□□ 2.49
C12orf29-202ENST00000453037 CHIC1Q5VXU3 224 aa28.55■■■□□ 2.16
C12orf29-202ENST00000453037 SENP3Q9H4L4 574 aaPredicted RBP26.2■■□□□ 1.78
C12orf29-202ENST00000453037 PHF23Q9BUL5 403 aaPredicted RBP25.74■■□□□ 1.71
C12orf29-202ENST00000453037 FOXD1Q16676 465 aa24.5■■□□□ 1.51
C12orf29-202ENST00000453037 POTEDQ86YR6 584 aa23.75■■□□□ 1.39
C12orf29-202ENST00000453037 MSH5O43196 834 aa23.17■■□□□ 1.3
C12orf29-202ENST00000453037 PIAS4Q8N2W9 510 aaPredicted RBP22.71■■□□□ 1.23
C12orf29-202ENST00000453037 PPP6R1Q9UPN7 881 aa22.41■■□□□ 1.18
C12orf29-202ENST00000453037 PLPPR3Q6T4P5 718 aa22.39■■□□□ 1.17
C12orf29-202ENST00000453037 ADRA2BP18089 450 aa22.26■■□□□ 1.15
C12orf29-202ENST00000453037 DMRT2Q9Y5R5 561 aa20.69■□□□□ 0.9
C12orf29-202ENST00000453037 MAPK8IP2Q13387 824 aaPredicted RBP20.64■□□□□ 0.89
C12orf29-202ENST00000453037 SCAF1Q9H7N4 1312 aaKnown RBP20.34■□□□□ 0.85
C12orf29-202ENST00000453037 CACNB1Q02641 598 aaPredicted RBP20.23■□□□□ 0.83
C12orf29-202ENST00000453037 DCAF8L1A6NGE4 600 aa19.75■□□□□ 0.75
C12orf29-202ENST00000453037 RNF39Q9H2S5 420 aa19.74■□□□□ 0.75
C12orf29-202ENST00000453037 HOXD11P31277 338 aaPredicted RBP19.69■□□□□ 0.74
C12orf29-202ENST00000453037 PPP4R3CPQ6ZMV5 832 aa19.53■□□□□ 0.72
C12orf29-202ENST00000453037 C1QBPQ07021 282 aaKnown RBP19.39■□□□□ 0.69
C12orf29-202ENST00000453037 RNF216Q9NWF9 866 aaPredicted RBP19.34■□□□□ 0.69
C12orf29-202ENST00000453037 CNKSR2Q8WXI2 1034 aa19.32■□□□□ 0.68
C12orf29-202ENST00000453037 DNAJC5BQ9UF47 199 aa19.17■□□□□ 0.66
C12orf29-202ENST00000453037 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.65■□□□□ 0.58
C12orf29-202ENST00000453037 NCBP3Q53F19 620 aaKnown RBP18.55■□□□□ 0.56
C12orf29-202ENST00000453037 POTEHQ6S545 545 aa18.47■□□□□ 0.55
C12orf29-202ENST00000453037 NPM3O75607 178 aaKnown RBP18.33■□□□□ 0.52
C12orf29-202ENST00000453037 U3KPZ7 1027 aaPredicted RBP18.27■□□□□ 0.52
C12orf29-202ENST00000453037 DSG3P32926 999 aa18.25■□□□□ 0.51
C12orf29-202ENST00000453037 SPINK5Q9NQ38 1064 aaPredicted RBP18.18■□□□□ 0.5
C12orf29-202ENST00000453037 CAPN15O75808 1086 aa18.12■□□□□ 0.49
C12orf29-202ENST00000453037 SLC4A2P04920 1241 aa17.7■□□□□ 0.42
C12orf29-202ENST00000453037 TRHP20396 242 aaPredicted RBP17.67■□□□□ 0.42
C12orf29-202ENST00000453037 ZNF219Q9P2Y4 722 aaPredicted RBP17.67■□□□□ 0.42
C12orf29-202ENST00000453037 ABCB7O75027 752 aa17.66■□□□□ 0.42
C12orf29-202ENST00000453037 APLP2Q06481 763 aa17.66■□□□□ 0.42
C12orf29-202ENST00000453037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.48■□□□□ 0.39
C12orf29-202ENST00000453037 HNRNPUL2Q1KMD3 747 aaKnown RBP17.48■□□□□ 0.39
C12orf29-202ENST00000453037 RBM42Q9BTD8 480 aaKnown RBP17.4■□□□□ 0.38
C12orf29-202ENST00000453037 KCNA4P22459 653 aa17.39■□□□□ 0.37
C12orf29-202ENST00000453037 SAMD1Q6SPF0 538 aaPredicted RBP17.35■□□□□ 0.37
C12orf29-202ENST00000453037 CHRDL2Q6WN34 429 aa17.29■□□□□ 0.36
C12orf29-202ENST00000453037 NISCHQ9Y2I1 1504 aa17.2■□□□□ 0.34
C12orf29-202ENST00000453037 POLA2Q14181 598 aa17.07■□□□□ 0.32
C12orf29-202ENST00000453037 SP7Q8TDD2 431 aaPredicted RBP17.01■□□□□ 0.31
C12orf29-202ENST00000453037 MYCNP04198 464 aaPredicted RBP16.96■□□□□ 0.31
C12orf29-202ENST00000453037 AKT1S1Q96B36 256 aa16.87■□□□□ 0.29
C12orf29-202ENST00000453037 PIP4P2Q8N4L2 257 aa16.75■□□□□ 0.27
C12orf29-202ENST00000453037 REM2Q8IYK8 340 aaPredicted RBP16.71■□□□□ 0.27
C12orf29-202ENST00000453037 ZBTB12Q9Y330 459 aaPredicted RBP16.7■□□□□ 0.26
C12orf29-202ENST00000453037 ATF5Q9Y2D1 282 aaPredicted RBP16.64■□□□□ 0.25
C12orf29-202ENST00000453037 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
C12orf29-202ENST00000453037 HAX1O00165 279 aa16.56■□□□□ 0.24
C12orf29-202ENST00000453037 PITPNM1O00562 1244 aa16.56■□□□□ 0.24
C12orf29-202ENST00000453037 FXR2P51116 673 aaKnown RBP eCLIP16.56■□□□□ 0.24
C12orf29-202ENST00000453037 ABCC9O60706 1549 aa16.45■□□□□ 0.22
C12orf29-202ENST00000453037 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
C12orf29-202ENST00000453037 EVX2Q03828 476 aa16.37■□□□□ 0.21
C12orf29-202ENST00000453037 SLC4A1APQ9BWU0 796 aaKnown RBP16.25■□□□□ 0.19
C12orf29-202ENST00000453037 SPDYE2BA6NHP3 402 aa16.14■□□□□ 0.17
C12orf29-202ENST00000453037 SPDYE6P0CI01 402 aa16.14■□□□□ 0.17
C12orf29-202ENST00000453037 SPDYE2Q495Y8 402 aa16.14■□□□□ 0.17
C12orf29-202ENST00000453037 PRKAR2AP13861 404 aaKnown RBP16.09■□□□□ 0.17
C12orf29-202ENST00000453037 C19orf67A6NJJ6 358 aa16.05■□□□□ 0.16
C12orf29-202ENST00000453037 ZBTB22O15209 634 aa16.01■□□□□ 0.15
C12orf29-202ENST00000453037 ATXN8OSP0DMR3 200 aa16■□□□□ 0.15
C12orf29-202ENST00000453037 SPDYE1Q8NFV5 336 aaPredicted RBP16■□□□□ 0.15
C12orf29-202ENST00000453037 FBLN2P98095 1184 aa15.97■□□□□ 0.15
C12orf29-202ENST00000453037 GABBR2O75899 941 aa15.95■□□□□ 0.14
C12orf29-202ENST00000453037 CLEC11AQ9Y240 323 aa15.95■□□□□ 0.14
C12orf29-202ENST00000453037 LHX8Q68G74 356 aa15.92■□□□□ 0.14
C12orf29-202ENST00000453037 SSUH2Q9Y2M2 353 aa15.89■□□□□ 0.13
C12orf29-202ENST00000453037 MKRN4PQ13434 485 aaPredicted RBP15.85■□□□□ 0.13
C12orf29-202ENST00000453037 CCDC180Q9P1Z9 1646 aa15.84■□□□□ 0.13
C12orf29-202ENST00000453037 ZNF692Q9BU19 519 aaPredicted RBP15.79■□□□□ 0.12
C12orf29-202ENST00000453037 CHADLQ6NUI6 762 aa15.76■□□□□ 0.11
C12orf29-202ENST00000453037 POTEIP0CG38 1075 aa15.64■□□□□ 0.09
C12orf29-202ENST00000453037 PRR29P0C7W0 189 aa15.62■□□□□ 0.09
C12orf29-202ENST00000453037 PABPN1Q86U42 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
C12orf29-202ENST00000453037 CD44P16070 742 aaKnown RBP15.54■□□□□ 0.08
C12orf29-202ENST00000453037 CLCN6P51797 869 aa15.54■□□□□ 0.08
C12orf29-202ENST00000453037 FARP1Q9Y4F1 1045 aaPredicted RBP15.48■□□□□ 0.07
C12orf29-202ENST00000453037 RB1CC1Q8TDY2 1594 aa15.41■□□□□ 0.06
C12orf29-202ENST00000453037 PLSCR2Q9NRY7 297 aa15.38■□□□□ 0.05
C12orf29-202ENST00000453037 DCBLD2Q96PD2 775 aa15.33■□□□□ 0.04
C12orf29-202ENST00000453037 ZNF579Q8NAF0 562 aaKnown RBP15.32■□□□□ 0.04
C12orf29-202ENST00000453037 DNAJC5Q9H3Z4 198 aa15.28■□□□□ 0.04
C12orf29-202ENST00000453037 ZRANB1Q9UGI0 708 aa15.2■□□□□ 0.02
C12orf29-202ENST00000453037 OTUD5Q96G74 571 aa15.18■□□□□ 0.02
C12orf29-202ENST00000453037 GALR2O43603 387 aaPredicted RBP15.15■□□□□ 0.02
C12orf29-202ENST00000453037 CREBZFQ9NS37 354 aa15.13■□□□□ 0.01
C12orf29-202ENST00000453037 NACADO15069 1562 aa15.12■□□□□ 0.01
C12orf29-202ENST00000453037 POTEB2H3BUK9 544 aa15.11■□□□□ 0.01
C12orf29-202ENST00000453037 POTEMA6NI47 508 aa15.02■□□□□ -0
C12orf29-202ENST00000453037 UNC13AQ9UPW8 1703 aa15.02□□□□□ -0.01
C12orf29-202ENST00000453037 STAG3Q9UJ98 1225 aa14.98□□□□□ -0.01
C12orf29-202ENST00000453037 POTEGQ6S5H5 508 aa14.96□□□□□ -0.01
C12orf29-202ENST00000453037 PHF12Q96QT6 1004 aa14.96□□□□□ -0.01
C12orf29-202ENST00000453037 PELP1Q8IZL8 1130 aaKnown RBP14.93□□□□□ -0.02
C12orf29-202ENST00000453037 CECR2Q9BXF3 1484 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms