RNA–Protein interactions for RNA: ENST00000451560.1

TMEM38B-205, Transcript of transmembrane protein 38B, humanhuman

TSL 3

Gene TMEM38B, Length 451 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-205ENST00000451560 AEBP2Q6ZN18 517 aaPredicted RBP20.95■□□□□ 0.94
TMEM38B-205ENST00000451560 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
TMEM38B-205ENST00000451560 SENP3Q9H4L4 574 aaPredicted RBP17.94■□□□□ 0.46
TMEM38B-205ENST00000451560 PHF23Q9BUL5 403 aaPredicted RBP17.69■□□□□ 0.42
TMEM38B-205ENST00000451560 FOXD1Q16676 465 aa16.73■□□□□ 0.27
TMEM38B-205ENST00000451560 MSH5O43196 834 aa15.76■□□□□ 0.11
TMEM38B-205ENST00000451560 POTEDQ86YR6 584 aa15.73■□□□□ 0.11
TMEM38B-205ENST00000451560 PLPPR3Q6T4P5 718 aa15.7■□□□□ 0.1
TMEM38B-205ENST00000451560 PIAS4Q8N2W9 510 aaPredicted RBP15.62■□□□□ 0.09
TMEM38B-205ENST00000451560 PPP6R1Q9UPN7 881 aa15.48■□□□□ 0.07
TMEM38B-205ENST00000451560 ADRA2BP18089 450 aa15.44■□□□□ 0.06
TMEM38B-205ENST00000451560 MAPK8IP2Q13387 824 aaPredicted RBP14.24□□□□□ -0.13
TMEM38B-205ENST00000451560 DMRT2Q9Y5R5 561 aa14.18□□□□□ -0.14
TMEM38B-205ENST00000451560 SCAF1Q9H7N4 1312 aaKnown RBP14.17□□□□□ -0.14
TMEM38B-205ENST00000451560 PPP4R3CPQ6ZMV5 832 aa13.72□□□□□ -0.21
TMEM38B-205ENST00000451560 DCAF8L1A6NGE4 600 aa13.69□□□□□ -0.22
TMEM38B-205ENST00000451560 CACNB1Q02641 598 aaPredicted RBP13.67□□□□□ -0.22
TMEM38B-205ENST00000451560 HOXD11P31277 338 aaPredicted RBP13.57□□□□□ -0.24
TMEM38B-205ENST00000451560 CNKSR2Q8WXI2 1034 aa13.52□□□□□ -0.25
TMEM38B-205ENST00000451560 RNF216Q9NWF9 866 aaPredicted RBP13.43□□□□□ -0.26
TMEM38B-205ENST00000451560 RNF39Q9H2S5 420 aa13.4□□□□□ -0.26
TMEM38B-205ENST00000451560 C1QBPQ07021 282 aaKnown RBP13.22□□□□□ -0.29
TMEM38B-205ENST00000451560 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
TMEM38B-205ENST00000451560 DNAJC5BQ9UF47 199 aa13.14□□□□□ -0.31
TMEM38B-205ENST00000451560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13□□□□□ -0.33
TMEM38B-205ENST00000451560 NPM3O75607 178 aaKnown RBP12.94□□□□□ -0.34
TMEM38B-205ENST00000451560 U3KPZ7 1027 aaPredicted RBP12.64□□□□□ -0.39
TMEM38B-205ENST00000451560 CAPN15O75808 1086 aa12.57□□□□□ -0.4
TMEM38B-205ENST00000451560 SPINK5Q9NQ38 1064 aaPredicted RBP12.53□□□□□ -0.4
TMEM38B-205ENST00000451560 KCNA4P22459 653 aa12.51□□□□□ -0.41
TMEM38B-205ENST00000451560 DSG3P32926 999 aa12.49□□□□□ -0.41
TMEM38B-205ENST00000451560 SLC4A2P04920 1241 aa12.39□□□□□ -0.43
TMEM38B-205ENST00000451560 APLP2Q06481 763 aa12.33□□□□□ -0.44
TMEM38B-205ENST00000451560 TRHP20396 242 aaPredicted RBP12.32□□□□□ -0.44
TMEM38B-205ENST00000451560 POTEHQ6S545 545 aa12.29□□□□□ -0.44
TMEM38B-205ENST00000451560 ZNF219Q9P2Y4 722 aaPredicted RBP12.27□□□□□ -0.45
TMEM38B-205ENST00000451560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.26□□□□□ -0.45
TMEM38B-205ENST00000451560 HNRNPUL2Q1KMD3 747 aaKnown RBP12.26□□□□□ -0.45
TMEM38B-205ENST00000451560 ABCB7O75027 752 aa12.24□□□□□ -0.45
TMEM38B-205ENST00000451560 NISCHQ9Y2I1 1504 aa12.18□□□□□ -0.46
TMEM38B-205ENST00000451560 SAMD1Q6SPF0 538 aaPredicted RBP12.18□□□□□ -0.46
TMEM38B-205ENST00000451560 MYCNP04198 464 aaPredicted RBP11.98□□□□□ -0.49
TMEM38B-205ENST00000451560 RBM42Q9BTD8 480 aaKnown RBP11.96□□□□□ -0.49
TMEM38B-205ENST00000451560 POLA2Q14181 598 aa11.93□□□□□ -0.5
TMEM38B-205ENST00000451560 SLC4A1APQ9BWU0 796 aaKnown RBP11.8□□□□□ -0.52
TMEM38B-205ENST00000451560 CHRDL2Q6WN34 429 aa11.76□□□□□ -0.53
TMEM38B-205ENST00000451560 FOXD4L1Q9NU39 408 aa11.75□□□□□ -0.53
TMEM38B-205ENST00000451560 ATF5Q9Y2D1 282 aaPredicted RBP11.7□□□□□ -0.54
TMEM38B-205ENST00000451560 ZBTB12Q9Y330 459 aaPredicted RBP11.67□□□□□ -0.54
TMEM38B-205ENST00000451560 AKT1S1Q96B36 256 aa11.63□□□□□ -0.55
TMEM38B-205ENST00000451560 OSCARQ8IYS5 282 aa11.53□□□□□ -0.56
TMEM38B-205ENST00000451560 REM2Q8IYK8 340 aaPredicted RBP11.51□□□□□ -0.57
TMEM38B-205ENST00000451560 ZBTB22O15209 634 aa11.47□□□□□ -0.57
TMEM38B-205ENST00000451560 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
TMEM38B-205ENST00000451560 SP7Q8TDD2 431 aaPredicted RBP11.42□□□□□ -0.58
TMEM38B-205ENST00000451560 ATXN8OSP0DMR3 200 aa11.4□□□□□ -0.58
TMEM38B-205ENST00000451560 PITPNM1O00562 1244 aa11.38□□□□□ -0.59
TMEM38B-205ENST00000451560 HAX1O00165 279 aa11.32□□□□□ -0.6
TMEM38B-205ENST00000451560 FXR2P51116 673 aaKnown RBP eCLIP11.32□□□□□ -0.6
TMEM38B-205ENST00000451560 FBLN2P98095 1184 aa11.31□□□□□ -0.6
TMEM38B-205ENST00000451560 SPDYE2BA6NHP3 402 aa11.28□□□□□ -0.6
TMEM38B-205ENST00000451560 SPDYE6P0CI01 402 aa11.28□□□□□ -0.6
TMEM38B-205ENST00000451560 SPDYE2Q495Y8 402 aa11.28□□□□□ -0.6
TMEM38B-205ENST00000451560 CLEC11AQ9Y240 323 aa11.17□□□□□ -0.62
TMEM38B-205ENST00000451560 MKRN4PQ13434 485 aaPredicted RBP11.14□□□□□ -0.63
TMEM38B-205ENST00000451560 SPDYE1Q8NFV5 336 aaPredicted RBP11.14□□□□□ -0.63
TMEM38B-205ENST00000451560 ZNF692Q9BU19 519 aaPredicted RBP11.14□□□□□ -0.63
TMEM38B-205ENST00000451560 PRKAR2AP13861 404 aaKnown RBP11.11□□□□□ -0.63
TMEM38B-205ENST00000451560 EVX2Q03828 476 aa11.11□□□□□ -0.63
TMEM38B-205ENST00000451560 SSUH2Q9Y2M2 353 aa11.08□□□□□ -0.64
TMEM38B-205ENST00000451560 C19orf67A6NJJ6 358 aa10.96□□□□□ -0.65
TMEM38B-205ENST00000451560 PABPN1Q86U42 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
TMEM38B-205ENST00000451560 PRR29P0C7W0 189 aa10.94□□□□□ -0.66
TMEM38B-205ENST00000451560 CHADLQ6NUI6 762 aa10.94□□□□□ -0.66
TMEM38B-205ENST00000451560 GABBR2O75899 941 aa10.87□□□□□ -0.67
TMEM38B-205ENST00000451560 CSRNP3Q8WYN3 585 aa10.78□□□□□ -0.68
TMEM38B-205ENST00000451560 FARP1Q9Y4F1 1045 aaPredicted RBP10.76□□□□□ -0.69
TMEM38B-205ENST00000451560 CD44P16070 742 aaKnown RBP10.75□□□□□ -0.69
TMEM38B-205ENST00000451560 LHX8Q68G74 356 aa10.72□□□□□ -0.69
TMEM38B-205ENST00000451560 CCDC180Q9P1Z9 1646 aa10.71□□□□□ -0.69
TMEM38B-205ENST00000451560 CLCN6P51797 869 aa10.64□□□□□ -0.71
TMEM38B-205ENST00000451560 STAG3Q9UJ98 1225 aa10.63□□□□□ -0.71
TMEM38B-205ENST00000451560 POTEIP0CG38 1075 aa10.61□□□□□ -0.71
TMEM38B-205ENST00000451560 EHMT2Q96KQ7 1210 aa10.58□□□□□ -0.72
TMEM38B-205ENST00000451560 DCBLD2Q96PD2 775 aa10.58□□□□□ -0.72
TMEM38B-205ENST00000451560 ZRANB1Q9UGI0 708 aa10.58□□□□□ -0.72
TMEM38B-205ENST00000451560 CREBZFQ9NS37 354 aa10.57□□□□□ -0.72
TMEM38B-205ENST00000451560 SPDYE4A6NLX3 237 aa10.56□□□□□ -0.72
TMEM38B-205ENST00000451560 ZNF579Q8NAF0 562 aaKnown RBP10.54□□□□□ -0.72
TMEM38B-205ENST00000451560 PLSCR2Q9NRY7 297 aa10.5□□□□□ -0.73
TMEM38B-205ENST00000451560 PAK3O75914 559 aaPredicted RBP10.47□□□□□ -0.73
TMEM38B-205ENST00000451560 GALR2O43603 387 aaPredicted RBP10.44□□□□□ -0.74
TMEM38B-205ENST00000451560 NPM1P06748 294 aaKnown RBP eCLIP10.43□□□□□ -0.74
TMEM38B-205ENST00000451560 PHF12Q96QT6 1004 aa10.38□□□□□ -0.75
TMEM38B-205ENST00000451560 MNX1P50219 401 aaPredicted RBP10.35□□□□□ -0.75
TMEM38B-205ENST00000451560 ABCC9O60706 1549 aa10.28□□□□□ -0.76
TMEM38B-205ENST00000451560 OTUD5Q96G74 571 aa10.27□□□□□ -0.77
TMEM38B-205ENST00000451560 POTEB2H3BUK9 544 aa10.26□□□□□ -0.77
TMEM38B-205ENST00000451560 PELP1Q8IZL8 1130 aaKnown RBP10.24□□□□□ -0.77
TMEM38B-205ENST00000451560 MS4A3Q96HJ5 214 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms