RNA–Protein interactions for RNA: ENST00000446198.5

PODXL-203, Transcript of podocalyxin like, humanhuman

TSL 2

Gene PODXL, Length 6,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PODXL-203ENST00000446198 DCAF8L2P0C7V8 631 aa24.55■■□□□ 1.52
PODXL-203ENST00000446198 SUPT5HO00267 1087 aaKnown RBP23.52■■□□□ 1.36
PODXL-203ENST00000446198 EHMT2Q96KQ7 1210 aa23.1■■□□□ 1.29
PODXL-203ENST00000446198 SHROOM4Q9ULL8 1493 aa23.04■■□□□ 1.28
PODXL-203ENST00000446198 NISCHQ9Y2I1 1504 aa22.69■■□□□ 1.22
PODXL-203ENST00000446198 PELP1Q8IZL8 1130 aaKnown RBP22.63■■□□□ 1.21
PODXL-203ENST00000446198 TTBK1Q5TCY1 1321 aaPredicted RBP22.34■■□□□ 1.17
PODXL-203ENST00000446198 APLP2Q06481 763 aa22.31■■□□□ 1.16
PODXL-203ENST00000446198 FAM9AQ8IZU1 332 aaPredicted RBP22.29■■□□□ 1.16
PODXL-203ENST00000446198 PCGF6Q9BYE7 350 aa22.27■■□□□ 1.16
PODXL-203ENST00000446198 RANGAP1P46060 587 aaPredicted RBP21.92■■□□□ 1.1
PODXL-203ENST00000446198 ERICH6Q7L0X2 663 aa21.9■■□□□ 1.1
PODXL-203ENST00000446198 CENPBP07199 599 aaPredicted RBP21.88■■□□□ 1.09
PODXL-203ENST00000446198 CCER1Q8TC90 406 aaPredicted RBP21.81■■□□□ 1.08
PODXL-203ENST00000446198 ZEB1P37275 1124 aaPredicted RBP21.7■■□□□ 1.06
PODXL-203ENST00000446198 YTHDC1Q96MU7 727 aaKnown RBP21.65■■□□□ 1.06
PODXL-203ENST00000446198 TRIM41Q8WV44 630 aa21.64■■□□□ 1.05
PODXL-203ENST00000446198 ATP1B4Q9UN42 357 aaPredicted RBP21.62■■□□□ 1.05
PODXL-203ENST00000446198 PPARGC1BQ86YN6 1023 aaKnown RBP21.46■■□□□ 1.03
PODXL-203ENST00000446198 UBTFP17480 764 aaKnown RBP21.45■■□□□ 1.02
PODXL-203ENST00000446198 NEFLP07196 543 aa21.41■■□□□ 1.02
PODXL-203ENST00000446198 MYT1Q01538 1121 aa21.17■□□□□ 0.98
PODXL-203ENST00000446198 TRIM26Q12899 539 aaPredicted RBP21.1■□□□□ 0.97
PODXL-203ENST00000446198 HRCP23327 699 aa21.03■□□□□ 0.96
PODXL-203ENST00000446198 ITGAEP38570 1179 aa20.98■□□□□ 0.95
PODXL-203ENST00000446198 POLR3GLQ9BT43 218 aa20.94■□□□□ 0.94
PODXL-203ENST00000446198 LOC105371045A0A1W2PR82 267 aa20.91■□□□□ 0.94
PODXL-203ENST00000446198 CNGB1Q14028 1251 aaPredicted RBP20.86■□□□□ 0.93
PODXL-203ENST00000446198 DAXXQ9UER7 740 aaPredicted RBP20.85■□□□□ 0.93
PODXL-203ENST00000446198 HNRNPUL2Q1KMD3 747 aaKnown RBP20.82■□□□□ 0.92
PODXL-203ENST00000446198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.7■□□□□ 0.9
PODXL-203ENST00000446198 MYT1LQ9UL68 1186 aa20.68■□□□□ 0.9
PODXL-203ENST00000446198 CHIC1Q5VXU3 224 aa20.64■□□□□ 0.9
PODXL-203ENST00000446198 DIEXFQ68CQ4 756 aaKnown RBP20.56■□□□□ 0.88
PODXL-203ENST00000446198 SLC4A1APQ9BWU0 796 aaKnown RBP20.45■□□□□ 0.86
PODXL-203ENST00000446198 RTL5Q5HYW3 569 aaPredicted RBP20.42■□□□□ 0.86
PODXL-203ENST00000446198 ZNF316A6NFI3 1004 aaPredicted RBP20.41■□□□□ 0.86
PODXL-203ENST00000446198 BCANQ96GW7 911 aa20.4■□□□□ 0.86
PODXL-203ENST00000446198 CLSPNQ9HAW4 1339 aa20.38■□□□□ 0.85
PODXL-203ENST00000446198 FAM50AQ14320 339 aaKnown RBP20.32■□□□□ 0.84
PODXL-203ENST00000446198 GTF3C3Q9Y5Q9 886 aa20.31■□□□□ 0.84
PODXL-203ENST00000446198 NEUROD1Q13562 356 aa20.29■□□□□ 0.84
PODXL-203ENST00000446198 TRIM52Q96A61 297 aa20.22■□□□□ 0.83
PODXL-203ENST00000446198 ZNF326Q5BKZ1 582 aaKnown RBP20.08■□□□□ 0.81
PODXL-203ENST00000446198 ANP32CO43423 234 aa20.06■□□□□ 0.8
PODXL-203ENST00000446198 CDK11AQ9UQ88 783 aaPredicted RBP20.06■□□□□ 0.8
PODXL-203ENST00000446198 BCL11AQ9H165 835 aa19.96■□□□□ 0.79
PODXL-203ENST00000446198 ACIN1Q9UKV3 1341 aaKnown RBP19.89■□□□□ 0.78
PODXL-203ENST00000446198 PABPN1Q86U42 306 aaKnown RBP eCLIP19.88■□□□□ 0.77
PODXL-203ENST00000446198 CANXP27824 592 aaKnown RBP19.83■□□□□ 0.77
PODXL-203ENST00000446198 ZBTB47Q9UFB7 747 aaPredicted RBP19.83■□□□□ 0.77
PODXL-203ENST00000446198 NPM2Q86SE8 214 aaKnown RBP19.78■□□□□ 0.76
PODXL-203ENST00000446198 SLC24A1O60721 1099 aa19.77■□□□□ 0.76
PODXL-203ENST00000446198 ARID3CA6NKF2 412 aa19.76■□□□□ 0.75
PODXL-203ENST00000446198 P3H3Q8IVL6 736 aa19.75■□□□□ 0.75
PODXL-203ENST00000446198 ANP32AP39687 249 aaKnown RBP19.72■□□□□ 0.75
PODXL-203ENST00000446198 FBLN2P98095 1184 aa19.7■□□□□ 0.74
PODXL-203ENST00000446198 FKBP8Q14318 412 aa19.67■□□□□ 0.74
PODXL-203ENST00000446198 ABCC9O60706 1549 aa19.66■□□□□ 0.74
PODXL-203ENST00000446198 ZNF777Q9ULD5 760 aaPredicted RBP19.57■□□□□ 0.72
PODXL-203ENST00000446198 EIF5BO60841 1220 aaKnown RBP19.56■□□□□ 0.72
PODXL-203ENST00000446198 NEFMP07197 916 aa19.55■□□□□ 0.72
PODXL-203ENST00000446198 CSRNP3Q8WYN3 585 aa19.52■□□□□ 0.72
PODXL-203ENST00000446198 HNRNPUQ00839 825 aaKnown RBP eCLIP19.5■□□□□ 0.71
PODXL-203ENST00000446198 FAM9BQ8IZU0 186 aa19.49■□□□□ 0.71
PODXL-203ENST00000446198 DDX10Q13206 875 aaKnown RBP19.48■□□□□ 0.71
PODXL-203ENST00000446198 SALL2Q9Y467 1007 aaPredicted RBP19.47■□□□□ 0.71
PODXL-203ENST00000446198 NBR1Q14596 966 aa19.43■□□□□ 0.7
PODXL-203ENST00000446198 TONSLQ96HA7 1378 aa19.41■□□□□ 0.7
PODXL-203ENST00000446198 HSP90AA1P07900 732 aaKnown RBP19.4■□□□□ 0.7
PODXL-203ENST00000446198 ANP32BQ92688 251 aaKnown RBP19.36■□□□□ 0.69
PODXL-203ENST00000446198 ARXQ96QS3 562 aa19.34■□□□□ 0.69
PODXL-203ENST00000446198 IRX6P78412 446 aaPredicted RBP19.32■□□□□ 0.68
PODXL-203ENST00000446198 SCAF1Q9H7N4 1312 aaKnown RBP19.32■□□□□ 0.68
PODXL-203ENST00000446198 CHGAP10645 457 aaKnown RBP19.32■□□□□ 0.68
PODXL-203ENST00000446198 CCDC136Q96JN2 1154 aa19.3■□□□□ 0.68
PODXL-203ENST00000446198 UPF2Q9HAU5 1272 aaKnown RBP19.3■□□□□ 0.68
PODXL-203ENST00000446198 CHIC2Q9UKJ5 165 aa19.26■□□□□ 0.67
PODXL-203ENST00000446198 MIER1Q8N108 512 aa19.25■□□□□ 0.67
PODXL-203ENST00000446198 HIRIP3Q9BW71 556 aaPredicted RBP19.25■□□□□ 0.67
PODXL-203ENST00000446198 DCAF1Q9Y4B6 1507 aa19.24■□□□□ 0.67
PODXL-203ENST00000446198 TMC1Q8TDI8 760 aa19.23■□□□□ 0.67
PODXL-203ENST00000446198 PLPPR3Q6T4P5 718 aa19.19■□□□□ 0.66
PODXL-203ENST00000446198 MRS2Q9HD23 443 aa19.18■□□□□ 0.66
PODXL-203ENST00000446198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.17■□□□□ 0.66
PODXL-203ENST00000446198 STAG3Q9UJ98 1225 aa19.17■□□□□ 0.66
PODXL-203ENST00000446198 KDM2AQ9Y2K7 1162 aa19.15■□□□□ 0.66
PODXL-203ENST00000446198 WDR43Q15061 677 aaKnown RBP eCLIP19.12■□□□□ 0.65
PODXL-203ENST00000446198 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.12■□□□□ 0.65
PODXL-203ENST00000446198 ESF1Q9H501 851 aaKnown RBP19.1■□□□□ 0.65
PODXL-203ENST00000446198 SCRIBQ14160 1630 aa19.09■□□□□ 0.65
PODXL-203ENST00000446198 GLIPR1L2Q4G1C9 344 aa19.08■□□□□ 0.65
PODXL-203ENST00000446198 SENP3-EIF4A1A0A087X0R7 540 aa19.07■□□□□ 0.64
PODXL-203ENST00000446198 SENP3Q9H4L4 574 aaPredicted RBP19.01■□□□□ 0.63
PODXL-203ENST00000446198 RRP7BPQ9NSQ0 103 aa18.94■□□□□ 0.62
PODXL-203ENST00000446198 EIF4G2P78344 907 aaKnown RBP eCLIP18.92■□□□□ 0.62
PODXL-203ENST00000446198 MTUS2Q5JR59 1369 aa18.91■□□□□ 0.62
PODXL-203ENST00000446198 MYH16Q9H6N6 1097 aa18.9■□□□□ 0.62
PODXL-203ENST00000446198 MYO15BQ96JP2 1530 aa18.89■□□□□ 0.61
PODXL-203ENST00000446198 TSPY4P0CV99 314 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms