RNA–Protein interactions for RNA: ENST00000431099.3

CBWD1-208, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-208ENST00000431099 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
CBWD1-208ENST00000431099 CHIC1Q5VXU3 224 aa22.92■■□□□ 1.26
CBWD1-208ENST00000431099 SENP3Q9H4L4 574 aaPredicted RBP20.41■□□□□ 0.86
CBWD1-208ENST00000431099 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
CBWD1-208ENST00000431099 FOXD1Q16676 465 aa19.09■□□□□ 0.65
CBWD1-208ENST00000431099 PLPPR3Q6T4P5 718 aa18.66■□□□□ 0.58
CBWD1-208ENST00000431099 POTEDQ86YR6 584 aa18.02■□□□□ 0.48
CBWD1-208ENST00000431099 MSH5O43196 834 aa17.94■□□□□ 0.46
CBWD1-208ENST00000431099 PIAS4Q8N2W9 510 aaPredicted RBP17.77■□□□□ 0.44
CBWD1-208ENST00000431099 PPP6R1Q9UPN7 881 aa17.75■□□□□ 0.43
CBWD1-208ENST00000431099 ADRA2BP18089 450 aa17.74■□□□□ 0.43
CBWD1-208ENST00000431099 PPP4R3CPQ6ZMV5 832 aa16.47■□□□□ 0.23
CBWD1-208ENST00000431099 KCNA4P22459 653 aa16.29■□□□□ 0.2
CBWD1-208ENST00000431099 MAPK8IP2Q13387 824 aaPredicted RBP16.24■□□□□ 0.19
CBWD1-208ENST00000431099 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
CBWD1-208ENST00000431099 DMRT2Q9Y5R5 561 aa16.15■□□□□ 0.18
CBWD1-208ENST00000431099 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
CBWD1-208ENST00000431099 CNKSR2Q8WXI2 1034 aa15.96■□□□□ 0.15
CBWD1-208ENST00000431099 NISCHQ9Y2I1 1504 aa15.91■□□□□ 0.14
CBWD1-208ENST00000431099 NPM3O75607 178 aaKnown RBP15.86■□□□□ 0.13
CBWD1-208ENST00000431099 RNF216Q9NWF9 866 aaPredicted RBP15.63■□□□□ 0.09
CBWD1-208ENST00000431099 CACNB1Q02641 598 aaPredicted RBP15.58■□□□□ 0.08
CBWD1-208ENST00000431099 DCAF8L1A6NGE4 600 aa15.53■□□□□ 0.08
CBWD1-208ENST00000431099 HOXD11P31277 338 aaPredicted RBP15.53■□□□□ 0.08
CBWD1-208ENST00000431099 SLC4A1APQ9BWU0 796 aaKnown RBP15.51■□□□□ 0.07
CBWD1-208ENST00000431099 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
CBWD1-208ENST00000431099 RNF39Q9H2S5 420 aa15.3■□□□□ 0.04
CBWD1-208ENST00000431099 EHMT2Q96KQ7 1210 aa15.25■□□□□ 0.03
CBWD1-208ENST00000431099 C1QBPQ07021 282 aaKnown RBP15.04■□□□□ -0
CBWD1-208ENST00000431099 CSRNP3Q8WYN3 585 aa15.03■□□□□ -0
CBWD1-208ENST00000431099 ZBTB22O15209 634 aa15□□□□□ -0.01
CBWD1-208ENST00000431099 SLC4A2P04920 1241 aa14.95□□□□□ -0.02
CBWD1-208ENST00000431099 FOXD4L1Q9NU39 408 aa14.92□□□□□ -0.02
CBWD1-208ENST00000431099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.77□□□□□ -0.05
CBWD1-208ENST00000431099 MYCNP04198 464 aaPredicted RBP14.65□□□□□ -0.06
CBWD1-208ENST00000431099 U3KPZ7 1027 aaPredicted RBP14.59□□□□□ -0.07
CBWD1-208ENST00000431099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.41□□□□□ -0.1
CBWD1-208ENST00000431099 HNRNPUL2Q1KMD3 747 aaKnown RBP14.41□□□□□ -0.1
CBWD1-208ENST00000431099 ATXN8OSP0DMR3 200 aa14.38□□□□□ -0.11
CBWD1-208ENST00000431099 SAMD1Q6SPF0 538 aaPredicted RBP14.38□□□□□ -0.11
CBWD1-208ENST00000431099 CCDC180Q9P1Z9 1646 aa14.32□□□□□ -0.12
CBWD1-208ENST00000431099 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
CBWD1-208ENST00000431099 CAPN15O75808 1086 aa14.26□□□□□ -0.13
CBWD1-208ENST00000431099 DSG3P32926 999 aa14.25□□□□□ -0.13
CBWD1-208ENST00000431099 ATF5Q9Y2D1 282 aaPredicted RBP14.25□□□□□ -0.13
CBWD1-208ENST00000431099 APLP2Q06481 763 aa14.22□□□□□ -0.13
CBWD1-208ENST00000431099 POTEHQ6S545 545 aa14.06□□□□□ -0.16
CBWD1-208ENST00000431099 ZNF219Q9P2Y4 722 aaPredicted RBP14.02□□□□□ -0.17
CBWD1-208ENST00000431099 TRHP20396 242 aaPredicted RBP14.01□□□□□ -0.17
CBWD1-208ENST00000431099 ABCC9O60706 1549 aa13.99□□□□□ -0.17
CBWD1-208ENST00000431099 ABCB7O75027 752 aa13.92□□□□□ -0.18
CBWD1-208ENST00000431099 POLA2Q14181 598 aa13.83□□□□□ -0.2
CBWD1-208ENST00000431099 MKRN4PQ13434 485 aaPredicted RBP13.65□□□□□ -0.22
CBWD1-208ENST00000431099 FBLN2P98095 1184 aa13.61□□□□□ -0.23
CBWD1-208ENST00000431099 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
CBWD1-208ENST00000431099 FKBP8Q14318 412 aa13.55□□□□□ -0.24
CBWD1-208ENST00000431099 RBM42Q9BTD8 480 aaKnown RBP13.55□□□□□ -0.24
CBWD1-208ENST00000431099 RB1CC1Q8TDY2 1594 aa13.53□□□□□ -0.24
CBWD1-208ENST00000431099 NACADO15069 1562 aa13.49□□□□□ -0.25
CBWD1-208ENST00000431099 MYO15BQ96JP2 1530 aa13.41□□□□□ -0.26
CBWD1-208ENST00000431099 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
CBWD1-208ENST00000431099 CHRDL2Q6WN34 429 aa13.4□□□□□ -0.26
CBWD1-208ENST00000431099 OSCARQ8IYS5 282 aa13.36□□□□□ -0.27
CBWD1-208ENST00000431099 SPDYE2BA6NHP3 402 aa13.26□□□□□ -0.29
CBWD1-208ENST00000431099 SPDYE6P0CI01 402 aa13.26□□□□□ -0.29
CBWD1-208ENST00000431099 SPDYE2Q495Y8 402 aa13.26□□□□□ -0.29
CBWD1-208ENST00000431099 DCAF1Q9Y4B6 1507 aa13.25□□□□□ -0.29
CBWD1-208ENST00000431099 PROM2Q8N271 834 aa13.22□□□□□ -0.29
CBWD1-208ENST00000431099 ZNF692Q9BU19 519 aaPredicted RBP13.22□□□□□ -0.29
CBWD1-208ENST00000431099 UNC13AQ9UPW8 1703 aa13.22□□□□□ -0.29
CBWD1-208ENST00000431099 DCAF8L2P0C7V8 631 aa13.21□□□□□ -0.29
CBWD1-208ENST00000431099 ZCCHC6Q5VYS8 1495 aaKnown RBP13.21□□□□□ -0.3
CBWD1-208ENST00000431099 AKT1S1Q96B36 256 aa13.19□□□□□ -0.3
CBWD1-208ENST00000431099 SSUH2Q9Y2M2 353 aa13.19□□□□□ -0.3
CBWD1-208ENST00000431099 REM2Q8IYK8 340 aaPredicted RBP13.1□□□□□ -0.31
CBWD1-208ENST00000431099 SHROOM4Q9ULL8 1493 aa13.08□□□□□ -0.32
CBWD1-208ENST00000431099 BICRAQ9NZM4 1560 aa13.07□□□□□ -0.32
CBWD1-208ENST00000431099 PABPN1Q86U42 306 aaKnown RBP eCLIP13.06□□□□□ -0.32
CBWD1-208ENST00000431099 SP7Q8TDD2 431 aaPredicted RBP13.05□□□□□ -0.32
CBWD1-208ENST00000431099 PIP4P2Q8N4L2 257 aa13.04□□□□□ -0.32
CBWD1-208ENST00000431099 FBXO3Q9UK99 471 aa13.02□□□□□ -0.33
CBWD1-208ENST00000431099 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
CBWD1-208ENST00000431099 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.34
CBWD1-208ENST00000431099 SCRIBQ14160 1630 aa12.89□□□□□ -0.35
CBWD1-208ENST00000431099 HAX1O00165 279 aa12.87□□□□□ -0.35
CBWD1-208ENST00000431099 VASPP50552 380 aaPredicted RBP12.87□□□□□ -0.35
CBWD1-208ENST00000431099 STAG3Q9UJ98 1225 aa12.85□□□□□ -0.35
CBWD1-208ENST00000431099 SPDYE1Q8NFV5 336 aaPredicted RBP12.83□□□□□ -0.36
CBWD1-208ENST00000431099 EIF4G1Q04637 1599 aaKnown RBP12.75□□□□□ -0.37
CBWD1-208ENST00000431099 CLEC11AQ9Y240 323 aa12.75□□□□□ -0.37
CBWD1-208ENST00000431099 CC2D2AQ9P2K1 1620 aa12.73□□□□□ -0.37
CBWD1-208ENST00000431099 EVX2Q03828 476 aa12.72□□□□□ -0.37
CBWD1-208ENST00000431099 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
CBWD1-208ENST00000431099 MIER1Q8N108 512 aa12.66□□□□□ -0.38
CBWD1-208ENST00000431099 PLCD3Q8N3E9 789 aa12.66□□□□□ -0.38
CBWD1-208ENST00000431099 CECR2Q9BXF3 1484 aa12.65□□□□□ -0.38
CBWD1-208ENST00000431099 PRR29P0C7W0 189 aa12.65□□□□□ -0.38
CBWD1-208ENST00000431099 PRKAR2AP13861 404 aaKnown RBP12.63□□□□□ -0.39
CBWD1-208ENST00000431099 AMER1Q5JTC6 1135 aaPredicted RBP12.62□□□□□ -0.39
CBWD1-208ENST00000431099 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms