RNA–Protein interactions for RNA: ENST00000430899.5

CARF-209, Transcript of calcium responsive transcription factor, humanhuman

TSL 4

Gene CARF, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARF-209ENST00000430899 AEBP2Q6ZN18 517 aaPredicted RBP22.78■■□□□ 1.24
CARF-209ENST00000430899 CHIC1Q5VXU3 224 aa21.4■■□□□ 1.02
CARF-209ENST00000430899 SENP3Q9H4L4 574 aaPredicted RBP19.49■□□□□ 0.71
CARF-209ENST00000430899 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
CARF-209ENST00000430899 FOXD1Q16676 465 aa18.19■□□□□ 0.5
CARF-209ENST00000430899 MSH5O43196 834 aa17.12■□□□□ 0.33
CARF-209ENST00000430899 POTEDQ86YR6 584 aa17.11■□□□□ 0.33
CARF-209ENST00000430899 PLPPR3Q6T4P5 718 aa17.02■□□□□ 0.32
CARF-209ENST00000430899 PIAS4Q8N2W9 510 aaPredicted RBP16.97■□□□□ 0.31
CARF-209ENST00000430899 PPP6R1Q9UPN7 881 aa16.83■□□□□ 0.28
CARF-209ENST00000430899 ADRA2BP18089 450 aa16.78■□□□□ 0.28
CARF-209ENST00000430899 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
CARF-209ENST00000430899 DMRT2Q9Y5R5 561 aa15.4■□□□□ 0.06
CARF-209ENST00000430899 SCAF1Q9H7N4 1312 aaKnown RBP15.38■□□□□ 0.05
CARF-209ENST00000430899 PPP4R3CPQ6ZMV5 832 aa14.89□□□□□ -0.03
CARF-209ENST00000430899 CACNB1Q02641 598 aaPredicted RBP14.88□□□□□ -0.03
CARF-209ENST00000430899 DCAF8L1A6NGE4 600 aa14.87□□□□□ -0.03
CARF-209ENST00000430899 HOXD11P31277 338 aaPredicted RBP14.73□□□□□ -0.05
CARF-209ENST00000430899 CNKSR2Q8WXI2 1034 aa14.66□□□□□ -0.06
CARF-209ENST00000430899 RNF39Q9H2S5 420 aa14.58□□□□□ -0.08
CARF-209ENST00000430899 RNF216Q9NWF9 866 aaPredicted RBP14.57□□□□□ -0.08
CARF-209ENST00000430899 C1QBPQ07021 282 aaKnown RBP14.36□□□□□ -0.11
CARF-209ENST00000430899 NCBP3Q53F19 620 aaKnown RBP14.26□□□□□ -0.13
CARF-209ENST00000430899 DNAJC5BQ9UF47 199 aa14.25□□□□□ -0.13
CARF-209ENST00000430899 KCNA4P22459 653 aa14.18□□□□□ -0.14
CARF-209ENST00000430899 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.1□□□□□ -0.15
CARF-209ENST00000430899 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.17
CARF-209ENST00000430899 EHMT2Q96KQ7 1210 aa13.78□□□□□ -0.2
CARF-209ENST00000430899 U3KPZ7 1027 aaPredicted RBP13.74□□□□□ -0.21
CARF-209ENST00000430899 CAPN15O75808 1086 aa13.65□□□□□ -0.22
CARF-209ENST00000430899 SPINK5Q9NQ38 1064 aaPredicted RBP13.63□□□□□ -0.23
CARF-209ENST00000430899 SLC4A1APQ9BWU0 796 aaKnown RBP13.59□□□□□ -0.23
CARF-209ENST00000430899 DSG3P32926 999 aa13.58□□□□□ -0.24
CARF-209ENST00000430899 SLC4A2P04920 1241 aa13.44□□□□□ -0.26
CARF-209ENST00000430899 TRHP20396 242 aaPredicted RBP13.38□□□□□ -0.27
CARF-209ENST00000430899 POTEHQ6S545 545 aa13.38□□□□□ -0.27
CARF-209ENST00000430899 APLP2Q06481 763 aa13.35□□□□□ -0.27
CARF-209ENST00000430899 ZNF219Q9P2Y4 722 aaPredicted RBP13.31□□□□□ -0.28
CARF-209ENST00000430899 ABCB7O75027 752 aa13.3□□□□□ -0.28
CARF-209ENST00000430899 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
CARF-209ENST00000430899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.28□□□□□ -0.28
CARF-209ENST00000430899 HNRNPUL2Q1KMD3 747 aaKnown RBP13.28□□□□□ -0.28
CARF-209ENST00000430899 SAMD1Q6SPF0 538 aaPredicted RBP13.19□□□□□ -0.3
CARF-209ENST00000430899 ZBTB22O15209 634 aa13.03□□□□□ -0.32
CARF-209ENST00000430899 MYCNP04198 464 aaPredicted RBP12.99□□□□□ -0.33
CARF-209ENST00000430899 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
CARF-209ENST00000430899 POLA2Q14181 598 aa12.94□□□□□ -0.34
CARF-209ENST00000430899 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
CARF-209ENST00000430899 CHRDL2Q6WN34 429 aa12.79□□□□□ -0.36
CARF-209ENST00000430899 ATF5Q9Y2D1 282 aaPredicted RBP12.7□□□□□ -0.38
CARF-209ENST00000430899 ZBTB12Q9Y330 459 aaPredicted RBP12.64□□□□□ -0.39
CARF-209ENST00000430899 AKT1S1Q96B36 256 aa12.62□□□□□ -0.39
CARF-209ENST00000430899 OSCARQ8IYS5 282 aa12.53□□□□□ -0.4
CARF-209ENST00000430899 ATXN8OSP0DMR3 200 aa12.52□□□□□ -0.41
CARF-209ENST00000430899 REM2Q8IYK8 340 aaPredicted RBP12.51□□□□□ -0.41
CARF-209ENST00000430899 SP7Q8TDD2 431 aaPredicted RBP12.43□□□□□ -0.42
CARF-209ENST00000430899 PIP4P2Q8N4L2 257 aa12.42□□□□□ -0.42
CARF-209ENST00000430899 PITPNM1O00562 1244 aa12.37□□□□□ -0.43
CARF-209ENST00000430899 HAX1O00165 279 aa12.32□□□□□ -0.44
CARF-209ENST00000430899 FXR2P51116 673 aaKnown RBP eCLIP12.3□□□□□ -0.44
CARF-209ENST00000430899 FBLN2P98095 1184 aa12.26□□□□□ -0.45
CARF-209ENST00000430899 SPDYE2BA6NHP3 402 aa12.23□□□□□ -0.45
CARF-209ENST00000430899 SPDYE6P0CI01 402 aa12.23□□□□□ -0.45
CARF-209ENST00000430899 SPDYE2Q495Y8 402 aa12.23□□□□□ -0.45
CARF-209ENST00000430899 NISCHQ9Y2I1 1504 aa12.21□□□□□ -0.46
CARF-209ENST00000430899 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
CARF-209ENST00000430899 EVX2Q03828 476 aa12.1□□□□□ -0.47
CARF-209ENST00000430899 MKRN4PQ13434 485 aaPredicted RBP12.09□□□□□ -0.47
CARF-209ENST00000430899 SPDYE1Q8NFV5 336 aaPredicted RBP12.09□□□□□ -0.47
CARF-209ENST00000430899 ZNF692Q9BU19 519 aaPredicted RBP12.08□□□□□ -0.48
CARF-209ENST00000430899 PRKAR2AP13861 404 aaKnown RBP12.07□□□□□ -0.48
CARF-209ENST00000430899 FKBP8Q14318 412 aa12.07□□□□□ -0.48
CARF-209ENST00000430899 SSUH2Q9Y2M2 353 aa12.01□□□□□ -0.49
CARF-209ENST00000430899 C19orf67A6NJJ6 358 aa11.91□□□□□ -0.5
CARF-209ENST00000430899 CHADLQ6NUI6 762 aa11.89□□□□□ -0.51
CARF-209ENST00000430899 PRR29P0C7W0 189 aa11.88□□□□□ -0.51
CARF-209ENST00000430899 PABPN1Q86U42 306 aaKnown RBP eCLIP11.88□□□□□ -0.51
CARF-209ENST00000430899 GABBR2O75899 941 aa11.82□□□□□ -0.52
CARF-209ENST00000430899 RTN4Q9NQC3 1192 aaKnown RBP11.73□□□□□ -0.53
CARF-209ENST00000430899 AMER1Q5JTC6 1135 aaPredicted RBP11.68□□□□□ -0.54
CARF-209ENST00000430899 CD44P16070 742 aaKnown RBP11.67□□□□□ -0.54
CARF-209ENST00000430899 LHX8Q68G74 356 aa11.67□□□□□ -0.54
CARF-209ENST00000430899 FARP1Q9Y4F1 1045 aaPredicted RBP11.67□□□□□ -0.54
CARF-209ENST00000430899 SPDYE4A6NLX3 237 aa11.62□□□□□ -0.55
CARF-209ENST00000430899 ABCC9O60706 1549 aa11.61□□□□□ -0.55
CARF-209ENST00000430899 CLCN6P51797 869 aa11.55□□□□□ -0.56
CARF-209ENST00000430899 POTEIP0CG38 1075 aa11.54□□□□□ -0.56
CARF-209ENST00000430899 STAG3Q9UJ98 1225 aa11.5□□□□□ -0.57
CARF-209ENST00000430899 DCBLD2Q96PD2 775 aa11.49□□□□□ -0.57
CARF-209ENST00000430899 ZRANB1Q9UGI0 708 aa11.48□□□□□ -0.57
CARF-209ENST00000430899 CREBZFQ9NS37 354 aa11.47□□□□□ -0.57
CARF-209ENST00000430899 FBXO3Q9UK99 471 aa11.47□□□□□ -0.57
CARF-209ENST00000430899 ZNF579Q8NAF0 562 aaKnown RBP11.45□□□□□ -0.58
CARF-209ENST00000430899 PROM2Q8N271 834 aa11.41□□□□□ -0.58
CARF-209ENST00000430899 PAK3O75914 559 aaPredicted RBP11.36□□□□□ -0.59
CARF-209ENST00000430899 GALR2O43603 387 aaPredicted RBP11.35□□□□□ -0.59
CARF-209ENST00000430899 VASPP50552 380 aaPredicted RBP11.31□□□□□ -0.6
CARF-209ENST00000430899 NPM1P06748 294 aaKnown RBP eCLIP11.29□□□□□ -0.6
CARF-209ENST00000430899 PHF12Q96QT6 1004 aa11.29□□□□□ -0.6
CARF-209ENST00000430899 SLC24A1O60721 1099 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms