RNA–Protein interactions for RNA: ENST00000428637.5

RAPH1-208, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

TSL 2

Gene RAPH1, Length 585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-208ENST00000428637 AEBP2Q6ZN18 517 aaPredicted RBP22.71■■□□□ 1.23
RAPH1-208ENST00000428637 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.09
RAPH1-208ENST00000428637 PHF23Q9BUL5 403 aaPredicted RBP19.23■□□□□ 0.67
RAPH1-208ENST00000428637 SENP3Q9H4L4 574 aaPredicted RBP19.23■□□□□ 0.67
RAPH1-208ENST00000428637 FOXD1Q16676 465 aa17.96■□□□□ 0.47
RAPH1-208ENST00000428637 PLPPR3Q6T4P5 718 aa17.57■□□□□ 0.4
RAPH1-208ENST00000428637 PPP6R1Q9UPN7 881 aa17.09■□□□□ 0.33
RAPH1-208ENST00000428637 ADRA2BP18089 450 aa17.05■□□□□ 0.32
RAPH1-208ENST00000428637 PIAS4Q8N2W9 510 aaPredicted RBP16.83■□□□□ 0.28
RAPH1-208ENST00000428637 MSH5O43196 834 aa16.6■□□□□ 0.25
RAPH1-208ENST00000428637 POTEDQ86YR6 584 aa15.7■□□□□ 0.1
RAPH1-208ENST00000428637 MAPK8IP2Q13387 824 aaPredicted RBP15.58■□□□□ 0.08
RAPH1-208ENST00000428637 SCAF1Q9H7N4 1312 aaKnown RBP15.5■□□□□ 0.07
RAPH1-208ENST00000428637 PPP4R3CPQ6ZMV5 832 aa15.48■□□□□ 0.07
RAPH1-208ENST00000428637 DMRT2Q9Y5R5 561 aa15.32■□□□□ 0.04
RAPH1-208ENST00000428637 NISCHQ9Y2I1 1504 aa15.15■□□□□ 0.02
RAPH1-208ENST00000428637 CNKSR2Q8WXI2 1034 aa15.08■□□□□ 0
RAPH1-208ENST00000428637 NCBP3Q53F19 620 aaKnown RBP14.94□□□□□ -0.02
RAPH1-208ENST00000428637 HOXD11P31277 338 aaPredicted RBP14.88□□□□□ -0.03
RAPH1-208ENST00000428637 RNF216Q9NWF9 866 aaPredicted RBP14.86□□□□□ -0.03
RAPH1-208ENST00000428637 KCNA4P22459 653 aa14.82□□□□□ -0.04
RAPH1-208ENST00000428637 NPM3O75607 178 aaKnown RBP14.78□□□□□ -0.04
RAPH1-208ENST00000428637 DCAF8L1A6NGE4 600 aa14.72□□□□□ -0.05
RAPH1-208ENST00000428637 DNAJC5BQ9UF47 199 aa14.31□□□□□ -0.12
RAPH1-208ENST00000428637 RNF39Q9H2S5 420 aa14.23□□□□□ -0.13
RAPH1-208ENST00000428637 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.21□□□□□ -0.132e-7■■■□□ 17.6
RAPH1-208ENST00000428637 CACNB1Q02641 598 aaPredicted RBP14.09□□□□□ -0.15
RAPH1-208ENST00000428637 SLC4A2P04920 1241 aa14.05□□□□□ -0.16
RAPH1-208ENST00000428637 SLC4A1APQ9BWU0 796 aaKnown RBP14.02□□□□□ -0.17
RAPH1-208ENST00000428637 C1QBPQ07021 282 aaKnown RBP14.01□□□□□ -0.17
RAPH1-208ENST00000428637 U3KPZ7 1027 aaPredicted RBP13.95□□□□□ -0.18
RAPH1-208ENST00000428637 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
RAPH1-208ENST00000428637 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
RAPH1-208ENST00000428637 ZBTB22O15209 634 aa13.64□□□□□ -0.23
RAPH1-208ENST00000428637 CCDC180Q9P1Z9 1646 aa13.62□□□□□ -0.23
RAPH1-208ENST00000428637 CAPN15O75808 1086 aa13.62□□□□□ -0.23
RAPH1-208ENST00000428637 ABCC9O60706 1549 aa13.61□□□□□ -0.23
RAPH1-208ENST00000428637 MYCNP04198 464 aaPredicted RBP13.61□□□□□ -0.23
RAPH1-208ENST00000428637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.59□□□□□ -0.23
RAPH1-208ENST00000428637 HNRNPUL2Q1KMD3 747 aaKnown RBP13.59□□□□□ -0.23
RAPH1-208ENST00000428637 SAMD1Q6SPF0 538 aaPredicted RBP13.55□□□□□ -0.24
RAPH1-208ENST00000428637 APLP2Q06481 763 aa13.5□□□□□ -0.25
RAPH1-208ENST00000428637 TRHP20396 242 aaPredicted RBP13.49□□□□□ -0.25
RAPH1-208ENST00000428637 DSG3P32926 999 aa13.45□□□□□ -0.26
RAPH1-208ENST00000428637 ZNF219Q9P2Y4 722 aaPredicted RBP13.4□□□□□ -0.26
RAPH1-208ENST00000428637 ATF5Q9Y2D1 282 aaPredicted RBP13.37□□□□□ -0.27
RAPH1-208ENST00000428637 ABCB7O75027 752 aa13.35□□□□□ -0.27
RAPH1-208ENST00000428637 EHMT2Q96KQ7 1210 aa13.33□□□□□ -0.28
RAPH1-208ENST00000428637 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
RAPH1-208ENST00000428637 POLA2Q14181 598 aa13.21□□□□□ -0.29
RAPH1-208ENST00000428637 ATXN8OSP0DMR3 200 aa13.19□□□□□ -0.3
RAPH1-208ENST00000428637 RB1CC1Q8TDY2 1594 aa12.96□□□□□ -0.33
RAPH1-208ENST00000428637 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
RAPH1-208ENST00000428637 NACADO15069 1562 aa12.86□□□□□ -0.35
RAPH1-208ENST00000428637 DCAF8L2P0C7V8 631 aa12.85□□□□□ -0.35
RAPH1-208ENST00000428637 MKRN4PQ13434 485 aaPredicted RBP12.75□□□□□ -0.37
RAPH1-208ENST00000428637 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
RAPH1-208ENST00000428637 RBM42Q9BTD8 480 aaKnown RBP12.75□□□□□ -0.37
RAPH1-208ENST00000428637 FBLN2P98095 1184 aa12.74□□□□□ -0.37
RAPH1-208ENST00000428637 UNC13AQ9UPW8 1703 aa12.71□□□□□ -0.37
RAPH1-208ENST00000428637 PABPN1Q86U42 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
RAPH1-208ENST00000428637 MYO15BQ96JP2 1530 aa12.67□□□□□ -0.38
RAPH1-208ENST00000428637 BICRAQ9NZM4 1560 aa12.57□□□□□ -0.4
RAPH1-208ENST00000428637 AKT1S1Q96B36 256 aa12.57□□□□□ -0.4
RAPH1-208ENST00000428637 ZCCHC6Q5VYS8 1495 aaKnown RBP12.53□□□□□ -0.4
RAPH1-208ENST00000428637 SPDYE2BA6NHP3 402 aa12.53□□□□□ -0.4
RAPH1-208ENST00000428637 SPDYE6P0CI01 402 aa12.53□□□□□ -0.4
RAPH1-208ENST00000428637 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
RAPH1-208ENST00000428637 DCAF1Q9Y4B6 1507 aa12.51□□□□□ -0.41
RAPH1-208ENST00000428637 REM2Q8IYK8 340 aaPredicted RBP12.49□□□□□ -0.41
RAPH1-208ENST00000428637 ZNF692Q9BU19 519 aaPredicted RBP12.48□□□□□ -0.41
RAPH1-208ENST00000428637 SSUH2Q9Y2M2 353 aa12.42□□□□□ -0.42
RAPH1-208ENST00000428637 CHRDL2Q6WN34 429 aa12.4□□□□□ -0.42
RAPH1-208ENST00000428637 SCRIBQ14160 1630 aa12.4□□□□□ -0.42
RAPH1-208ENST00000428637 SHROOM4Q9ULL8 1493 aa12.39□□□□□ -0.43
RAPH1-208ENST00000428637 POTEHQ6S545 545 aa12.36□□□□□ -0.43
RAPH1-208ENST00000428637 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
RAPH1-208ENST00000428637 CC2D2AQ9P2K1 1620 aa12.29□□□□□ -0.44
RAPH1-208ENST00000428637 SPDYE4A6NLX3 237 aa12.29□□□□□ -0.44
RAPH1-208ENST00000428637 CECR2Q9BXF3 1484 aa12.26□□□□□ -0.45
RAPH1-208ENST00000428637 EIF4G1Q04637 1599 aaKnown RBP12.26□□□□□ -0.45
RAPH1-208ENST00000428637 CLEC11AQ9Y240 323 aa12.25□□□□□ -0.45
RAPH1-208ENST00000428637 SPDYE1Q8NFV5 336 aaPredicted RBP12.24□□□□□ -0.45
RAPH1-208ENST00000428637 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
RAPH1-208ENST00000428637 FXR2P51116 673 aaKnown RBP eCLIP12.16□□□□□ -0.46
RAPH1-208ENST00000428637 PRR29P0C7W0 189 aa12.07□□□□□ -0.48
RAPH1-208ENST00000428637 PRKAR2AP13861 404 aaKnown RBP12.03□□□□□ -0.48
RAPH1-208ENST00000428637 FKBP8Q14318 412 aa12.03□□□□□ -0.48
RAPH1-208ENST00000428637 PROM2Q8N271 834 aa12.02□□□□□ -0.49
RAPH1-208ENST00000428637 CHADLQ6NUI6 762 aa12□□□□□ -0.49
RAPH1-208ENST00000428637 STAG3Q9UJ98 1225 aa11.98□□□□□ -0.49
RAPH1-208ENST00000428637 HAX1O00165 279 aa11.89□□□□□ -0.51
RAPH1-208ENST00000428637 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
RAPH1-208ENST00000428637 NCAPD3P42695 1498 aa11.86□□□□□ -0.51
RAPH1-208ENST00000428637 SMARCA4P51532 1647 aa11.83□□□□□ -0.52
RAPH1-208ENST00000428637 FARP1Q9Y4F1 1045 aaPredicted RBP11.83□□□□□ -0.52
RAPH1-208ENST00000428637 ATAD2BQ9ULI0 1458 aa11.83□□□□□ -0.52
RAPH1-208ENST00000428637 EVX2Q03828 476 aa11.82□□□□□ -0.52
RAPH1-208ENST00000428637 SMARCA2P51531 1590 aa11.81□□□□□ -0.52
RAPH1-208ENST00000428637 HMGXB3Q12766 1538 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms