RNA–Protein interactions for RNA: ENST00000408689.1

MIR548H4-201, Transcript of microRNA 548h-4, humanhuman

BASIC

Gene MIR548H4, Length 111 nt, Biotype miRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548H4-201ENST00000408689 POTEDQ86YR6 584 aa6.57□□□□□ -1.36
MIR548H4-201ENST00000408689 AEBP2Q6ZN18 517 aaPredicted RBP5.06□□□□□ -1.6
MIR548H4-201ENST00000408689 POTEHQ6S545 545 aa4.92□□□□□ -1.62
MIR548H4-201ENST00000408689 CACNB1Q02641 598 aaPredicted RBP4.77□□□□□ -1.65
MIR548H4-201ENST00000408689 PLSCR2Q9NRY7 297 aa4.77□□□□□ -1.65
MIR548H4-201ENST00000408689 CHIC1Q5VXU3 224 aa4.73□□□□□ -1.65
MIR548H4-201ENST00000408689 MSH5O43196 834 aa4.56□□□□□ -1.68
MIR548H4-201ENST00000408689 SENP3Q9H4L4 574 aaPredicted RBP4.52□□□□□ -1.69
MIR548H4-201ENST00000408689 FOXD1Q16676 465 aa4.37□□□□□ -1.71
MIR548H4-201ENST00000408689 PHF23Q9BUL5 403 aaPredicted RBP4.31□□□□□ -1.72
MIR548H4-201ENST00000408689 SP7Q8TDD2 431 aaPredicted RBP4.02□□□□□ -1.77
MIR548H4-201ENST00000408689 PIAS4Q8N2W9 510 aaPredicted RBP3.86□□□□□ -1.79
MIR548H4-201ENST00000408689 LHX8Q68G74 356 aa3.79□□□□□ -1.8
MIR548H4-201ENST00000408689 RNF39Q9H2S5 420 aa3.75□□□□□ -1.81
MIR548H4-201ENST00000408689 POTEMA6NI47 508 aa3.67□□□□□ -1.82
MIR548H4-201ENST00000408689 C1QBPQ07021 282 aaKnown RBP3.62□□□□□ -1.83
MIR548H4-201ENST00000408689 POTEGQ6S5H5 508 aa3.6□□□□□ -1.83
MIR548H4-201ENST00000408689 DCAF8L1A6NGE4 600 aa3.54□□□□□ -1.84
MIR548H4-201ENST00000408689 PCDH10Q9P2E7 1040 aa3.54□□□□□ -1.84
MIR548H4-201ENST00000408689 HAX1O00165 279 aa3.5□□□□□ -1.85
MIR548H4-201ENST00000408689 CHRDL2Q6WN34 429 aa3.48□□□□□ -1.85
MIR548H4-201ENST00000408689 DMRT2Q9Y5R5 561 aa3.36□□□□□ -1.87
MIR548H4-201ENST00000408689 EVX2Q03828 476 aa3.27□□□□□ -1.89
MIR548H4-201ENST00000408689 MAPK8IP2Q13387 824 aaPredicted RBP3.24□□□□□ -1.89
MIR548H4-201ENST00000408689 MMRN1Q13201 1228 aa3.21□□□□□ -1.9
MIR548H4-201ENST00000408689 CDAN1Q8IWY9 1227 aa3.19□□□□□ -1.9
MIR548H4-201ENST00000408689 OTUD5Q96G74 571 aa3.15□□□□□ -1.91
MIR548H4-201ENST00000408689 PPP6R1Q9UPN7 881 aa3.15□□□□□ -1.91
MIR548H4-201ENST00000408689 GABBR2O75899 941 aa3.12□□□□□ -1.91
MIR548H4-201ENST00000408689 ADRA2BP18089 450 aa3.12□□□□□ -1.91
MIR548H4-201ENST00000408689 DSG3P32926 999 aa3.12□□□□□ -1.91
MIR548H4-201ENST00000408689 PIP4P2Q8N4L2 257 aa3.11□□□□□ -1.91
MIR548H4-201ENST00000408689 FAM163AQ96GL9 167 aaPredicted RBP3.11□□□□□ -1.91
MIR548H4-201ENST00000408689 LOC100996750A0A140TA64 210 aa3.07□□□□□ -1.92
MIR548H4-201ENST00000408689 SPNS2Q8IVW8 549 aa3.07□□□□□ -1.92
MIR548H4-201ENST00000408689 KRTAP4-6Q9BYQ5 205 aa3.07□□□□□ -1.92
MIR548H4-201ENST00000408689 LCE2DQ5TA82 110 aaPredicted RBP3.03□□□□□ -1.92
MIR548H4-201ENST00000408689 RBM42Q9BTD8 480 aaKnown RBP3.02□□□□□ -1.93
MIR548H4-201ENST00000408689 POTEIP0CG38 1075 aa3.01□□□□□ -1.93
MIR548H4-201ENST00000408689 CAPN15O75808 1086 aa2.98□□□□□ -1.93
MIR548H4-201ENST00000408689 POTEB2H3BUK9 544 aa2.9□□□□□ -1.95
MIR548H4-201ENST00000408689 DCBLD2Q96PD2 775 aa2.86□□□□□ -1.95
MIR548H4-201ENST00000408689 SPINK5Q9NQ38 1064 aaPredicted RBP2.86□□□□□ -1.95
MIR548H4-201ENST00000408689 FXR2P51116 673 aaKnown RBP eCLIP2.83□□□□□ -1.96
MIR548H4-201ENST00000408689 ABCB7O75027 752 aa2.82□□□□□ -1.96
MIR548H4-201ENST00000408689 SCAF1Q9H7N4 1312 aaKnown RBP2.82□□□□□ -1.96
MIR548H4-201ENST00000408689 C19orf67A6NJJ6 358 aa2.8□□□□□ -1.96
MIR548H4-201ENST00000408689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.76□□□□□ -1.97
MIR548H4-201ENST00000408689 DNAJC5BQ9UF47 199 aa2.74□□□□□ -1.97
MIR548H4-201ENST00000408689 HOXD11P31277 338 aaPredicted RBP2.71□□□□□ -1.98
MIR548H4-201ENST00000408689 MAMSTRQ6ZN01 415 aa2.7□□□□□ -1.98
MIR548H4-201ENST00000408689 PITPNM1O00562 1244 aa2.69□□□□□ -1.98
MIR548H4-201ENST00000408689 KRTAP1-3Q8IUG1 177 aa2.69□□□□□ -1.98
MIR548H4-201ENST00000408689 REM2Q8IYK8 340 aaPredicted RBP2.69□□□□□ -1.98
MIR548H4-201ENST00000408689 XP32Q5T750 250 aa2.68□□□□□ -1.98
MIR548H4-201ENST00000408689 AKT1S1Q96B36 256 aa2.67□□□□□ -1.98
MIR548H4-201ENST00000408689 TRHP20396 242 aaPredicted RBP2.65□□□□□ -1.99
MIR548H4-201ENST00000408689 SUZ12Q15022 739 aaKnown RBP2.65□□□□□ -1.99
MIR548H4-201ENST00000408689 KRTAP17-1Q9BYP8 105 aa2.65□□□□□ -1.99
MIR548H4-201ENST00000408689 SCUBE2Q9NQ36 999 aa2.65□□□□□ -1.99
MIR548H4-201ENST00000408689 POTEJP0CG39 1038 aa2.64□□□□□ -1.99
MIR548H4-201ENST00000408689 PRKAR2AP13861 404 aaKnown RBP2.64□□□□□ -1.99
MIR548H4-201ENST00000408689 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.63□□□□□ -1.99
MIR548H4-201ENST00000408689 ST18O60284 1047 aa2.62□□□□□ -1.99
MIR548H4-201ENST00000408689 RNF166Q96A37 237 aaPredicted RBP2.62□□□□□ -1.99
MIR548H4-201ENST00000408689 IRX2Q9BZI1 471 aaPredicted RBP2.62□□□□□ -1.99
MIR548H4-201ENST00000408689 KRTAP4-8Q9BYQ9 185 aa2.61□□□□□ -1.99
MIR548H4-201ENST00000408689 KRTAP9-6A0A140TA67 174 aa2.6□□□□□ -1.99
MIR548H4-201ENST00000408689 KRTAP9-8Q9BYQ0 159 aa2.6□□□□□ -1.99
MIR548H4-201ENST00000408689 KRTAP9-2Q9BYQ4 174 aa2.58□□□□□ -2
MIR548H4-201ENST00000408689 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
MIR548H4-201ENST00000408689 Q6ZNB5 142 aa2.55□□□□□ -2
MIR548H4-201ENST00000408689 CLCN6P51797 869 aa2.53□□□□□ -2
MIR548H4-201ENST00000408689 MARVELD3Q96A59 401 aa2.53□□□□□ -2
MIR548H4-201ENST00000408689 KRTAP4-8A0A0G2JLE6 195 aa2.52□□□□□ -2.01
MIR548H4-201ENST00000408689 BTBD11A6QL63 1104 aa2.52□□□□□ -2.01
MIR548H4-201ENST00000408689 PLA2G2EQ9NZK7 142 aa2.52□□□□□ -2.01
MIR548H4-201ENST00000408689 METRNQ9UJH8 293 aa2.52□□□□□ -2.01
MIR548H4-201ENST00000408689 LCE3BQ5TA77 95 aa2.51□□□□□ -2.01
MIR548H4-201ENST00000408689 KRTAP3-3Q9BYR6 98 aa2.51□□□□□ -2.01
MIR548H4-201ENST00000408689 KRTAP3-2Q9BYR7 98 aa2.51□□□□□ -2.01
MIR548H4-201ENST00000408689 PSMG3-AS1Q96PY0 264 aa2.5□□□□□ -2.01
MIR548H4-201ENST00000408689 CD44P16070 742 aaKnown RBP2.49□□□□□ -2.01
MIR548H4-201ENST00000408689 ZNF219Q9P2Y4 722 aaPredicted RBP2.48□□□□□ -2.01
MIR548H4-201ENST00000408689 PELP1Q8IZL8 1130 aaKnown RBP2.47□□□□□ -2.01
MIR548H4-201ENST00000408689 KRTAP4-7Q9BYR0 210 aa2.47□□□□□ -2.01
MIR548H4-201ENST00000408689 MYT1LQ9UL68 1186 aa2.47□□□□□ -2.01
MIR548H4-201ENST00000408689 KRTAP9-9Q9BYP9 154 aa2.46□□□□□ -2.02
MIR548H4-201ENST00000408689 KRTAP9-4Q9BYQ2 154 aa2.46□□□□□ -2.02
MIR548H4-201ENST00000408689 U3KPZ7 1027 aaPredicted RBP2.46□□□□□ -2.02
MIR548H4-201ENST00000408689 GALR2O43603 387 aaPredicted RBP2.43□□□□□ -2.02
MIR548H4-201ENST00000408689 ZNF775Q96BV0 537 aaPredicted RBP2.43□□□□□ -2.02
MIR548H4-201ENST00000408689 TMEM121BQ9BXQ6 578 aaPredicted RBP2.42□□□□□ -2.02
MIR548H4-201ENST00000408689 ANO8Q9HCE9 1232 aaPredicted RBP2.42□□□□□ -2.02
MIR548H4-201ENST00000408689 C7P10643 843 aa2.4□□□□□ -2.03
MIR548H4-201ENST00000408689 CHADLQ6NUI6 762 aa2.39□□□□□ -2.03
MIR548H4-201ENST00000408689 RNF216Q9NWF9 866 aaPredicted RBP2.39□□□□□ -2.03
MIR548H4-201ENST00000408689 EMP3P54852 163 aa2.38□□□□□ -2.03
MIR548H4-201ENST00000408689 SLC39A7Q92504 469 aa2.38□□□□□ -2.03
MIR548H4-201ENST00000408689 KRTAP4-2Q9BYR5 136 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms