RNA–Protein interactions for RNA: ENST00000383872.1

RNU6-841P-201, Transcript of RNA, U6 small nuclear 841, pseudogene, humanhuman

BASIC

Gene RNU6-841P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-841P-201ENST00000383872 POTEDQ86YR6 584 aa1.89□□□□□ -2.11
RNU6-841P-201ENST00000383872 PLSCR2Q9NRY7 297 aa1.43□□□□□ -2.18
RNU6-841P-201ENST00000383872 POTEHQ6S545 545 aa1.3□□□□□ -2.2
RNU6-841P-201ENST00000383872 KRTAP17-1Q9BYP8 105 aa1.06□□□□□ -2.24
RNU6-841P-201ENST00000383872 KRTAP9-8Q9BYQ0 159 aa0.97□□□□□ -2.25
RNU6-841P-201ENST00000383872 XP32Q5T750 250 aa0.96□□□□□ -2.26
RNU6-841P-201ENST00000383872 LOC100996750A0A140TA64 210 aa0.93□□□□□ -2.26
RNU6-841P-201ENST00000383872 KRTAP4-6Q9BYQ5 205 aa0.93□□□□□ -2.26
RNU6-841P-201ENST00000383872 CACNB1Q02641 598 aaPredicted RBP0.92□□□□□ -2.26
RNU6-841P-201ENST00000383872 KRTAP5-3Q6L8H2 238 aa0.92□□□□□ -2.26
RNU6-841P-201ENST00000383872 SP7Q8TDD2 431 aaPredicted RBP0.84□□□□□ -2.27
RNU6-841P-201ENST00000383872 KRTAP4-5Q9BYR2 181 aa0.84□□□□□ -2.27
RNU6-841P-201ENST00000383872 POTEMA6NI47 508 aa0.8□□□□□ -2.28
RNU6-841P-201ENST00000383872 KRTAP1-3Q8IUG1 177 aa0.79□□□□□ -2.28
RNU6-841P-201ENST00000383872 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.77□□□□□ -2.29
RNU6-841P-201ENST00000383872 LHX8Q68G74 356 aa0.77□□□□□ -2.29
RNU6-841P-201ENST00000383872 POTEGQ6S5H5 508 aa0.76□□□□□ -2.29
RNU6-841P-201ENST00000383872 KRTAP9-6A0A140TA67 174 aa0.75□□□□□ -2.29
RNU6-841P-201ENST00000383872 KRTAP4-8A0A0G2JLE6 195 aa0.73□□□□□ -2.29
RNU6-841P-201ENST00000383872 KRTAP9-2Q9BYQ4 174 aa0.73□□□□□ -2.29
RNU6-841P-201ENST00000383872 KRTAP4-8Q9BYQ9 185 aa0.73□□□□□ -2.29
RNU6-841P-201ENST00000383872 KRTAP4-2Q9BYR5 136 aa0.73□□□□□ -2.29
RNU6-841P-201ENST00000383872 FOXD1Q16676 465 aa0.72□□□□□ -2.29
RNU6-841P-201ENST00000383872 KRTAP4-7Q9BYR0 210 aa0.72□□□□□ -2.29
RNU6-841P-201ENST00000383872 KRTAP9-9Q9BYP9 154 aa0.7□□□□□ -2.3
RNU6-841P-201ENST00000383872 KRTAP9-4Q9BYQ2 154 aa0.7□□□□□ -2.3
RNU6-841P-201ENST00000383872 PCDH10Q9P2E7 1040 aa0.67□□□□□ -2.3
RNU6-841P-201ENST00000383872 LCE3BQ5TA77 95 aa0.65□□□□□ -2.31
RNU6-841P-201ENST00000383872 KRTAP4-9Q9BYQ8 210 aa0.63□□□□□ -2.31
RNU6-841P-201ENST00000383872 HMCN1Q96RW7 5635 aa0.63□□□□□ -2.31
RNU6-841P-201ENST00000383872 MMRN1Q13201 1228 aa0.61□□□□□ -2.31
RNU6-841P-201ENST00000383872 KRTAP5-9P26371 169 aa0.6□□□□□ -2.31
RNU6-841P-201ENST00000383872 LCE1DQ5T752 114 aa0.59□□□□□ -2.31
RNU6-841P-201ENST00000383872 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.58□□□□□ -2.32
RNU6-841P-201ENST00000383872 SUZ12Q15022 739 aaKnown RBP0.57□□□□□ -2.32
RNU6-841P-201ENST00000383872 LCE2DQ5TA82 110 aaPredicted RBP0.56□□□□□ -2.32
RNU6-841P-201ENST00000383872 PSMG3-AS1Q96PY0 264 aa0.56□□□□□ -2.32
RNU6-841P-201ENST00000383872 KRTAP1-1Q07627 177 aa0.55□□□□□ -2.32
RNU6-841P-201ENST00000383872 KRTAP4-12Q9BQ66 201 aa0.55□□□□□ -2.32
RNU6-841P-201ENST00000383872 KRTAP4-11Q9BYQ6 195 aa0.55□□□□□ -2.32
RNU6-841P-201ENST00000383872 BTBD11A6QL63 1104 aa0.54□□□□□ -2.32
RNU6-841P-201ENST00000383872 KRTAP5-2Q701N4 177 aa0.54□□□□□ -2.32
RNU6-841P-201ENST00000383872 CDAN1Q8IWY9 1227 aa0.54□□□□□ -2.32
RNU6-841P-201ENST00000383872 KRTAP4-4Q9BYR3 166 aa0.53□□□□□ -2.32
RNU6-841P-201ENST00000383872 SPNS2Q8IVW8 549 aa0.52□□□□□ -2.33
RNU6-841P-201ENST00000383872 KRTAP5-4Q6L8H1 288 aa0.51□□□□□ -2.33
RNU6-841P-201ENST00000383872 RGS19P49795 217 aa0.49□□□□□ -2.33
RNU6-841P-201ENST00000383872 KRTAP5-1Q6L8H4 278 aa0.49□□□□□ -2.33
RNU6-841P-201ENST00000383872 OTUD5Q96G74 571 aa0.49□□□□□ -2.33
RNU6-841P-201ENST00000383872 KRTAP9-3Q9BYQ3 159 aa0.49□□□□□ -2.33
RNU6-841P-201ENST00000383872 EVX2Q03828 476 aa0.48□□□□□ -2.33
RNU6-841P-201ENST00000383872 KRTAP5-8O75690 187 aa0.47□□□□□ -2.33
RNU6-841P-201ENST00000383872 KRTAP4-3Q9BYR4 195 aa0.47□□□□□ -2.33
RNU6-841P-201ENST00000383872 MSH5O43196 834 aa0.46□□□□□ -2.34
RNU6-841P-201ENST00000383872 KRTAP5-5Q701N2 237 aaPredicted RBP0.46□□□□□ -2.34
RNU6-841P-201ENST00000383872 LAMC2Q13753 1193 aa0.45□□□□□ -2.34
RNU6-841P-201ENST00000383872 KRTAP19-1Q8IUB9 90 aa0.44□□□□□ -2.34
RNU6-841P-201ENST00000383872 HAX1O00165 279 aa0.43□□□□□ -2.34
RNU6-841P-201ENST00000383872 KRTAP5-11Q6L8G4 156 aa0.41□□□□□ -2.34
RNU6-841P-201ENST00000383872 CHRDL2Q6WN34 429 aa0.41□□□□□ -2.34
RNU6-841P-201ENST00000383872 OBSCNQ5VST9 7968 aa0.41□□□□□ -2.34
RNU6-841P-201ENST00000383872 KRTAP9-7A8MTY7 169 aa0.39□□□□□ -2.35
RNU6-841P-201ENST00000383872 POTEIP0CG38 1075 aa0.39□□□□□ -2.35
RNU6-841P-201ENST00000383872 FAM163AQ96GL9 167 aaPredicted RBP0.39□□□□□ -2.35
RNU6-841P-201ENST00000383872 POTEB2H3BUK9 544 aa0.38□□□□□ -2.35
RNU6-841P-201ENST00000383872 RNF39Q9H2S5 420 aa0.38□□□□□ -2.35
RNU6-841P-201ENST00000383872 LSRQ86X29 649 aaPredicted RBP0.37□□□□□ -2.35
RNU6-841P-201ENST00000383872 LORP23490 312 aaPredicted RBP0.35□□□□□ -2.35
RNU6-841P-201ENST00000383872 GABBR2O75899 941 aa0.34□□□□□ -2.36
RNU6-841P-201ENST00000383872 ZNF775Q96BV0 537 aaPredicted RBP0.33□□□□□ -2.36
RNU6-841P-201ENST00000383872 LCE2BO14633 110 aa0.32□□□□□ -2.36
RNU6-841P-201ENST00000383872 IRX2Q9BZI1 471 aaPredicted RBP0.3□□□□□ -2.36
RNU6-841P-201ENST00000383872 ANO8Q9HCE9 1232 aaPredicted RBP0.3□□□□□ -2.36
RNU6-841P-201ENST00000383872 AVENQ9NQS1 362 aaPredicted RBP0.29□□□□□ -2.36
RNU6-841P-201ENST00000383872 LCE5AQ5TCM9 118 aa0.28□□□□□ -2.36
RNU6-841P-201ENST00000383872 LCE4AQ5TA78 99 aa0.27□□□□□ -2.37
RNU6-841P-201ENST00000383872 Q6ZNB5 142 aa0.27□□□□□ -2.37
RNU6-841P-201ENST00000383872 CCER1Q8TC90 406 aaPredicted RBP0.27□□□□□ -2.37
RNU6-841P-201ENST00000383872 WDR26Q9H7D7 661 aa0.27□□□□□ -2.37
RNU6-841P-201ENST00000383872 AHNAKQ09666 5890 aaKnown RBP0.27□□□□□ -2.37
RNU6-841P-201ENST00000383872 C1QBPQ07021 282 aaKnown RBP0.26□□□□□ -2.37
RNU6-841P-201ENST00000383872 KRTAP5-7Q6L8G8 165 aa0.26□□□□□ -2.37
RNU6-841P-201ENST00000383872 PIP4P2Q8N4L2 257 aa0.26□□□□□ -2.37
RNU6-841P-201ENST00000383872 GOLGA2P5Q9HBQ8 144 aa0.26□□□□□ -2.37
RNU6-841P-201ENST00000383872 STK17AQ9UEE5 414 aa0.26□□□□□ -2.37
RNU6-841P-201ENST00000383872 ARID1BQ8NFD5 2236 aaPredicted RBP0.26□□□□□ -2.37
RNU6-841P-201ENST00000383872 MUC5BQ9HC84 5762 aaPredicted RBP0.26□□□□□ -2.37
RNU6-841P-201ENST00000383872 COBLO75128 1261 aa0.25□□□□□ -2.37
RNU6-841P-201ENST00000383872 KRTAP10-7P60409 375 aaPredicted RBP0.25□□□□□ -2.37
RNU6-841P-201ENST00000383872 KRTAP10-9P60411 292 aa0.25□□□□□ -2.37
RNU6-841P-201ENST00000383872 POTEJP0CG39 1038 aa0.24□□□□□ -2.37
RNU6-841P-201ENST00000383872 LCE2AQ5TA79 106 aaPredicted RBP0.24□□□□□ -2.37
RNU6-841P-201ENST00000383872 RNF166Q96A37 237 aaPredicted RBP0.24□□□□□ -2.37
RNU6-841P-201ENST00000383872 KRTAP3-3Q9BYR6 98 aa0.24□□□□□ -2.37
RNU6-841P-201ENST00000383872 KRTAP3-2Q9BYR7 98 aa0.24□□□□□ -2.37
RNU6-841P-201ENST00000383872 KRTAP9-6A8MVA2 160 aa0.23□□□□□ -2.37
RNU6-841P-201ENST00000383872 COL9A3Q14050 684 aaPredicted RBP0.23□□□□□ -2.37
RNU6-841P-201ENST00000383872 AHNAK2Q8IVF2 5795 aa0.22□□□□□ -2.37
RNU6-841P-201ENST00000383872 KCTD17Q8N5Z5 321 aa0.22□□□□□ -2.37
RNU6-841P-201ENST00000383872 POTEB3A0JP26 581 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms