RNA–Protein interactions for RNA: ENSMUST00000223217.1

3110009F21Rik-201, mousemouse

TSL 1 (best) BASIC

Gene 3110009F21Rik, Length 1,625 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
3110009F21Rik-201ENSMUST00000223217 Gm35339A0A140LHH9 1649 aa19.51■□□□□ 0.71
3110009F21Rik-201ENSMUST00000223217 NischQ80TM9 1593 aa19.12■□□□□ 0.65
3110009F21Rik-201ENSMUST00000223217 Abcc9P70170 1546 aa18.68■□□□□ 0.58
3110009F21Rik-201ENSMUST00000223217 Abcc8B2RUS7 1588 aa18.64■□□□□ 0.57
3110009F21Rik-201ENSMUST00000223217 Mapk8ip2Q9ERE9 830 aa18.45■□□□□ 0.54
3110009F21Rik-201ENSMUST00000223217 ScribQ80U72 1612 aa18.21■□□□□ 0.51
3110009F21Rik-201ENSMUST00000223217 NacadQ5SWP3 1504 aa17.53■□□□□ 0.4
3110009F21Rik-201ENSMUST00000223217 Kdm5dQ62240 1548 aa17.51■□□□□ 0.39
3110009F21Rik-201ENSMUST00000223217 Dnajc5bQ9CQ94 199 aa17.3■□□□□ 0.36
3110009F21Rik-201ENSMUST00000223217 Sycp2Q9CUU3 1500 aa17.24■□□□□ 0.35
3110009F21Rik-201ENSMUST00000223217 BicraF8VPZ9 1578 aa17.09■□□□□ 0.33
3110009F21Rik-201ENSMUST00000223217 Dcaf1Q80TR8 1506 aa17.02■□□□□ 0.32
3110009F21Rik-201ENSMUST00000223217 Thoc2B1AZI6 1594 aaKnown RBP16.67■□□□□ 0.26
3110009F21Rik-201ENSMUST00000223217 Pds5bQ4VA53 1446 aaKnown RBP16.64■□□□□ 0.25
3110009F21Rik-201ENSMUST00000223217 Rb1cc1Q9ESK9 1588 aa16.62■□□□□ 0.25
3110009F21Rik-201ENSMUST00000223217 Atad2bE9Q166 1460 aaKnown RBP16.41■□□□□ 0.22
3110009F21Rik-201ENSMUST00000223217 Cc2d2aQ8CFW7 1633 aa16.38■□□□□ 0.21
3110009F21Rik-201ENSMUST00000223217 Baz1aO88379 1555 aa16.36■□□□□ 0.21
3110009F21Rik-201ENSMUST00000223217 Crybg2B7ZCC2 1516 aa16.33■□□□□ 0.2
3110009F21Rik-201ENSMUST00000223217 Chic1Q8CBW7 227 aa16.3■□□□□ 0.2
3110009F21Rik-201ENSMUST00000223217 Ercc6F8VPZ5 1481 aa16.26■□□□□ 0.19
3110009F21Rik-201ENSMUST00000223217 Zcchc6Q5BLK4 1491 aaKnown RBP16.22■□□□□ 0.19
3110009F21Rik-201ENSMUST00000223217 Fam135aQ6NS59 1506 aa16.2■□□□□ 0.18
3110009F21Rik-201ENSMUST00000223217 Ccdc180J3QNE4 1664 aa16.19■□□□□ 0.18
3110009F21Rik-201ENSMUST00000223217 Smarca2Q6DIC0 1577 aa16.18■□□□□ 0.18
3110009F21Rik-201ENSMUST00000223217 Rhox8Q6VSS7 320 aa16.16■□□□□ 0.18
3110009F21Rik-201ENSMUST00000223217 Smarca4Q3TKT4 1613 aaKnown RBP16.11■□□□□ 0.17
3110009F21Rik-201ENSMUST00000223217 Iqgap2Q3UQ44 1575 aa16.09■□□□□ 0.17
3110009F21Rik-201ENSMUST00000223217 Cecr2E9Q2Z1 1453 aa16.04■□□□□ 0.16
3110009F21Rik-201ENSMUST00000223217 Frmpd1A2AKB4 1549 aa16.03■□□□□ 0.16
3110009F21Rik-201ENSMUST00000223217 Wdr62Q3U3T8 1523 aa16.03■□□□□ 0.16
3110009F21Rik-201ENSMUST00000223217 Phldb1Q6PDH0 1371 aaKnown RBP16.01■□□□□ 0.15
3110009F21Rik-201ENSMUST00000223217 Dnajc5P60904 198 aa15.96■□□□□ 0.15
3110009F21Rik-201ENSMUST00000223217 Baz1bQ9Z277 1479 aa15.91■□□□□ 0.14
3110009F21Rik-201ENSMUST00000223217 Ubl4bQ9CQ84 188 aa15.89■□□□□ 0.13
3110009F21Rik-201ENSMUST00000223217 Mrc2Q64449 1479 aa15.82■□□□□ 0.12
3110009F21Rik-201ENSMUST00000223217 Trim41Q5NCC3 630 aa15.79■□□□□ 0.12
3110009F21Rik-201ENSMUST00000223217 Unc13aQ4KUS2 1712 aa15.74■□□□□ 0.11
3110009F21Rik-201ENSMUST00000223217 GapdhsQ64467 440 aa15.61■□□□□ 0.09
3110009F21Rik-201ENSMUST00000223217 CftrP26361 1476 aa15.56■□□□□ 0.08
3110009F21Rik-201ENSMUST00000223217 Lrriq1Q0P5X1 1673 aa15.5■□□□□ 0.07
3110009F21Rik-201ENSMUST00000223217 Synj1Q8CHC4 1574 aa15.49■□□□□ 0.07
3110009F21Rik-201ENSMUST00000223217 Cttnbp2B9EJA2 1648 aa15.48■□□□□ 0.07
3110009F21Rik-201ENSMUST00000223217 Rsf1E9PWW9 1441 aaKnown RBP15.44■□□□□ 0.06
3110009F21Rik-201ENSMUST00000223217 Cux2P70298 1426 aa15.4■□□□□ 0.06
3110009F21Rik-201ENSMUST00000223217 Kif21aQ9QXL2 1672 aa15.35■□□□□ 0.05
3110009F21Rik-201ENSMUST00000223217 Brd4Q9ESU6 1400 aaKnown RBP15.35■□□□□ 0.05
3110009F21Rik-201ENSMUST00000223217 Kif15Q6P9L6 1387 aa15.32■□□□□ 0.04
3110009F21Rik-201ENSMUST00000223217 Shroom2A2ALU4 1481 aa15.31■□□□□ 0.04
3110009F21Rik-201ENSMUST00000223217 Eif4g3Q80XI3 1579 aaKnown RBP15.26■□□□□ 0.03
3110009F21Rik-201ENSMUST00000223217 Ccdc136Q3TVA9 1136 aa15.24■□□□□ 0.03
3110009F21Rik-201ENSMUST00000223217 Esf1Q3V1V3 845 aaKnown RBP15.23■□□□□ 0.03
3110009F21Rik-201ENSMUST00000223217 Col17a1Q07563 1470 aa15.21■□□□□ 0.02
3110009F21Rik-201ENSMUST00000223217 Npm1Q61937 292 aaKnown RBP15.17■□□□□ 0.02
3110009F21Rik-201ENSMUST00000223217 Lamc3Q9R0B6 1581 aa15.16■□□□□ 0.02
3110009F21Rik-201ENSMUST00000223217 Urb2E9Q7L1 1524 aaKnown RBP15.13■□□□□ 0.01
3110009F21Rik-201ENSMUST00000223217 Rtl1Q7M732 1744 aa15.12■□□□□ 0.01
3110009F21Rik-201ENSMUST00000223217 Plb1Q3TTY0 1478 aa15.1■□□□□ 0.01
3110009F21Rik-201ENSMUST00000223217 Cep164Q5DU05 1446 aa15.09■□□□□ 0.01
3110009F21Rik-201ENSMUST00000223217 Pabpn1Q8CCS6 302 aaKnown RBP15.09■□□□□ 0.01
3110009F21Rik-201ENSMUST00000223217 Dhx29Q6PGC1 1365 aaKnown RBP15.05■□□□□ 0
3110009F21Rik-201ENSMUST00000223217 Top2bQ64511 1612 aa15.03■□□□□ -0
3110009F21Rik-201ENSMUST00000223217 Pelp1Q9DBD5 1123 aaKnown RBP14.98□□□□□ -0.01
3110009F21Rik-201ENSMUST00000223217 Il27Q8K3I6 234 aa14.97□□□□□ -0.01
3110009F21Rik-201ENSMUST00000223217 LrpprcQ6PB66 1392 aaKnown RBP14.95□□□□□ -0.02
3110009F21Rik-201ENSMUST00000223217 Crocc2F6XLV1 1638 aa14.93□□□□□ -0.02
3110009F21Rik-201ENSMUST00000223217 Rusc2Q80U22 1514 aa14.92□□□□□ -0.02
3110009F21Rik-201ENSMUST00000223217 Ccdc18Q640L5 1455 aa14.91□□□□□ -0.02
3110009F21Rik-201ENSMUST00000223217 Zcchc11B2RX14 1644 aaKnown RBP14.89□□□□□ -0.03
3110009F21Rik-201ENSMUST00000223217 TnnQ80Z71 1560 aa14.88□□□□□ -0.03
3110009F21Rik-201ENSMUST00000223217 Ift140E9PY46 1464 aa14.88□□□□□ -0.03
3110009F21Rik-201ENSMUST00000223217 Pcdh10E9PXQ7 1057 aa14.85□□□□□ -0.03
3110009F21Rik-201ENSMUST00000223217 Camsap1A2AHC3 1581 aa14.85□□□□□ -0.03
3110009F21Rik-201ENSMUST00000223217 PogzQ8BZH4 1409 aaKnown RBP14.83□□□□□ -0.03
3110009F21Rik-201ENSMUST00000223217 Disp1Q3TDN0 1521 aa14.77□□□□□ -0.05
3110009F21Rik-201ENSMUST00000223217 Duox2A2AQ99 1517 aa14.75□□□□□ -0.05
3110009F21Rik-201ENSMUST00000223217 Adgrl3Q80TS3 1537 aa14.72□□□□□ -0.05
3110009F21Rik-201ENSMUST00000223217 Fam163aQ8CAA5 168 aa14.71□□□□□ -0.05
3110009F21Rik-201ENSMUST00000223217 Golga3P55937 1487 aa14.71□□□□□ -0.05
3110009F21Rik-201ENSMUST00000223217 Arhgef5E9Q7D5 1581 aa14.7□□□□□ -0.06
3110009F21Rik-201ENSMUST00000223217 Nup160Q9Z0W3 1402 aaKnown RBP14.7□□□□□ -0.06
3110009F21Rik-201ENSMUST00000223217 Cc2d2bA0A286YDU8 1405 aa14.67□□□□□ -0.06
3110009F21Rik-201ENSMUST00000223217 Cngb1E1AZ71 1325 aa14.66□□□□□ -0.06
3110009F21Rik-201ENSMUST00000223217 PtprkP35822 1457 aa14.66□□□□□ -0.06
3110009F21Rik-201ENSMUST00000223217 Gm156Q58A37 223 aa14.65□□□□□ -0.06
3110009F21Rik-201ENSMUST00000223217 Ttbk1Q6PCN3 1308 aa14.65□□□□□ -0.06
3110009F21Rik-201ENSMUST00000223217 Samd9lQ69Z37 1561 aa14.64□□□□□ -0.07
3110009F21Rik-201ENSMUST00000223217 Grin2bQ01097 1482 aa14.63□□□□□ -0.07
3110009F21Rik-201ENSMUST00000223217 Cep170Q6A065 1588 aa14.63□□□□□ -0.07
3110009F21Rik-201ENSMUST00000223217 Gapvd1Q6PAR5 1458 aa14.62□□□□□ -0.07
3110009F21Rik-201ENSMUST00000223217 PtprtQ99M80 1454 aa14.62□□□□□ -0.07
3110009F21Rik-201ENSMUST00000223217 Setd1bQ8CFT2 1985 aa14.61□□□□□ -0.07
3110009F21Rik-201ENSMUST00000223217 Fmn1Q05860 1466 aa14.6□□□□□ -0.07
3110009F21Rik-201ENSMUST00000223217 Fgd6Q69ZL1 1399 aa14.59□□□□□ -0.07
3110009F21Rik-201ENSMUST00000223217 Pbrm1Q8BSQ9 1634 aaKnown RBP14.58□□□□□ -0.07
3110009F21Rik-201ENSMUST00000223217 Rad54l2Q99NG0 1466 aa14.58□□□□□ -0.08
3110009F21Rik-201ENSMUST00000223217 AqrQ8CFQ3 1481 aaKnown RBP14.55□□□□□ -0.08
3110009F21Rik-201ENSMUST00000223217 Grin2aP35436 1464 aa14.53□□□□□ -0.08
3110009F21Rik-201ENSMUST00000223217 Magi3Q9EQJ9 1476 aa14.53□□□□□ -0.08
3110009F21Rik-201ENSMUST00000223217 Efcab5A0JP43 1406 aa14.52□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 120.9 ms