RNA–Protein interactions for RNA: ENSMUST00000200169.5

Chd8-212, Transcript of Chromodomain-helicase-DNA-binding protein 8, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Chd8, Length 8,509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8-212ENSMUST00000200169 Rhox8Q6VSS7 320 aa14.58□□□□□ -0.08
Chd8-212ENSMUST00000200169 Pelp1Q9DBD5 1123 aaKnown RBP14.47□□□□□ -0.09
Chd8-212ENSMUST00000200169 Cngb1E1AZ71 1325 aa14.43□□□□□ -0.1
Chd8-212ENSMUST00000200169 Rpgrip1Q9EPQ2 1331 aa14.3□□□□□ -0.12
Chd8-212ENSMUST00000200169 Las1lA2BE28 776 aaKnown RBP14.01□□□□□ -0.17
Chd8-212ENSMUST00000200169 Wdr66E9Q743 1299 aa13.88□□□□□ -0.19
Chd8-212ENSMUST00000200169 4930567H17RikQ3V0K5 233 aa13.79□□□□□ -0.2
Chd8-212ENSMUST00000200169 Amer1Q7TS75 1132 aa13.76□□□□□ -0.21
Chd8-212ENSMUST00000200169 Ube2uB1AUC4 352 aa13.6□□□□□ -0.23
Chd8-212ENSMUST00000200169 Stra8P70278 393 aa13.18□□□□□ -0.3
Chd8-212ENSMUST00000200169 Zeb1Q64318 1117 aa13.15□□□□□ -0.3
Chd8-212ENSMUST00000200169 Esf1Q3V1V3 845 aaKnown RBP13.08□□□□□ -0.32
Chd8-212ENSMUST00000200169 CenpbP27790 599 aa13.07□□□□□ -0.32
Chd8-212ENSMUST00000200169 Ehmt2Q9Z148 1263 aaKnown RBP12.99□□□□□ -0.33
Chd8-212ENSMUST00000200169 Npm2Q80W85 207 aa12.94□□□□□ -0.34
Chd8-212ENSMUST00000200169 4933416C03RikQ3V063 378 aa12.88□□□□□ -0.35
Chd8-212ENSMUST00000200169 Ttbk1Q6PCN3 1308 aa12.82□□□□□ -0.36
Chd8-212ENSMUST00000200169 NeflP08551 543 aa12.81□□□□□ -0.36
Chd8-212ENSMUST00000200169 Anp32bQ9EST5 272 aaKnown RBP12.79□□□□□ -0.36
Chd8-212ENSMUST00000200169 Slc24a1Q91WD8 1130 aa12.72□□□□□ -0.37
Chd8-212ENSMUST00000200169 Myt1Q8CFC2 1127 aa12.66□□□□□ -0.38
Chd8-212ENSMUST00000200169 Myt1lP97500 1187 aa12.65□□□□□ -0.38
Chd8-212ENSMUST00000200169 NrdcQ8BHG1 1161 aa12.58□□□□□ -0.4
Chd8-212ENSMUST00000200169 Ccdc136Q3TVA9 1136 aa12.54□□□□□ -0.4
Chd8-212ENSMUST00000200169 Trim41Q5NCC3 630 aa12.53□□□□□ -0.4
Chd8-212ENSMUST00000200169 Gab3Q8BSM5 595 aa12.53□□□□□ -0.4
Chd8-212ENSMUST00000200169 NefmP08553 848 aa12.52□□□□□ -0.41
Chd8-212ENSMUST00000200169 Os9Q8K2C7 672 aa12.5□□□□□ -0.41
Chd8-212ENSMUST00000200169 Cdk11bP24788 784 aaKnown RBP12.47□□□□□ -0.41
Chd8-212ENSMUST00000200169 Tnnt3Q9QZ47 272 aa12.45□□□□□ -0.42
Chd8-212ENSMUST00000200169 Rtl1Q7M732 1744 aa12.43□□□□□ -0.42
Chd8-212ENSMUST00000200169 Rtl5Q5DTT4 599 aa12.43□□□□□ -0.42
Chd8-212ENSMUST00000200169 CatipB9EKE5 520 aa12.41□□□□□ -0.42
Chd8-212ENSMUST00000200169 DiexfQ8BTT6 772 aaKnown RBP12.37□□□□□ -0.43
Chd8-212ENSMUST00000200169 UbtfP25976 765 aaKnown RBP12.3□□□□□ -0.44
Chd8-212ENSMUST00000200169 HrcG5E8J6 738 aa12.29□□□□□ -0.44
Chd8-212ENSMUST00000200169 Ythdc1E9Q5K9 736 aaKnown RBP12.25□□□□□ -0.45
Chd8-212ENSMUST00000200169 Eif5bQ05D44 1216 aaKnown RBP12.24□□□□□ -0.45
Chd8-212ENSMUST00000200169 NclP09405 707 aaKnown RBP12.23□□□□□ -0.45
Chd8-212ENSMUST00000200169 Neurod1Q60867 357 aa12.17□□□□□ -0.46
Chd8-212ENSMUST00000200169 Hsp90aa1P07901 733 aaKnown RBP12.16□□□□□ -0.46
Chd8-212ENSMUST00000200169 Acin1Q9JIX8 1338 aaKnown RBP12.15□□□□□ -0.46
Chd8-212ENSMUST00000200169 Ccdc180J3QNE4 1664 aa12.14□□□□□ -0.47
Chd8-212ENSMUST00000200169 Gm13697A2AK42 830 aa12.13□□□□□ -0.47
Chd8-212ENSMUST00000200169 DaxxO35613 739 aa12.1□□□□□ -0.47
Chd8-212ENSMUST00000200169 Upf2A2AT37 1269 aaKnown RBP12.08□□□□□ -0.48
Chd8-212ENSMUST00000200169 Fam50aQ9WV03 339 aaKnown RBP12.08□□□□□ -0.48
Chd8-212ENSMUST00000200169 Hdac5Q9Z2V6 1113 aa11.99□□□□□ -0.49
Chd8-212ENSMUST00000200169 Nop58Q6DFW4 536 aaKnown RBP11.99□□□□□ -0.49
Chd8-212ENSMUST00000200169 Znf326O88291 580 aa11.98□□□□□ -0.49
Chd8-212ENSMUST00000200169 Nlrp6Q91WS2 869 aa11.96□□□□□ -0.49
Chd8-212ENSMUST00000200169 Chic1Q8CBW7 227 aa11.92□□□□□ -0.5
Chd8-212ENSMUST00000200169 Gm13695A2AK44 830 aa11.92□□□□□ -0.5
Chd8-212ENSMUST00000200169 Il27Q8K3I6 234 aa11.91□□□□□ -0.5
Chd8-212ENSMUST00000200169 Atp1b4Q99ME6 356 aa11.9□□□□□ -0.5
Chd8-212ENSMUST00000200169 Lmod3E9QA62 571 aa11.89□□□□□ -0.51
Chd8-212ENSMUST00000200169 Polr3glQ8R0C0 218 aa11.85□□□□□ -0.51
Chd8-212ENSMUST00000200169 Hnrnpul2Q00PI9 745 aaKnown RBP11.82□□□□□ -0.52
Chd8-212ENSMUST00000200169 Anp32aO35381 247 aa11.8□□□□□ -0.52
Chd8-212ENSMUST00000200169 TonslQ6NZL6 1363 aa11.78□□□□□ -0.52
Chd8-212ENSMUST00000200169 Ap3b1Q9Z1T1 1105 aa11.76□□□□□ -0.53
Chd8-212ENSMUST00000200169 ArxO35085 564 aa11.73□□□□□ -0.53
Chd8-212ENSMUST00000200169 Trim44Q9QXA7 346 aa11.72□□□□□ -0.53
Chd8-212ENSMUST00000200169 Zbtb7cQ8VCZ7 619 aa11.71□□□□□ -0.53
Chd8-212ENSMUST00000200169 Erich6D3Z6S9 713 aa11.7□□□□□ -0.54
Chd8-212ENSMUST00000200169 NischQ80TM9 1593 aa11.7□□□□□ -0.54
Chd8-212ENSMUST00000200169 DekQ7TNV0 380 aaKnown RBP11.67□□□□□ -0.54
Chd8-212ENSMUST00000200169 Adam1bQ8R534 806 aa11.67□□□□□ -0.54
Chd8-212ENSMUST00000200169 Slc4a1apE9PX68 744 aa11.66□□□□□ -0.54
Chd8-212ENSMUST00000200169 PnnO35691 725 aaKnown RBP11.66□□□□□ -0.54
Chd8-212ENSMUST00000200169 Ccdc9Q8VC31 543 aaKnown RBP11.61□□□□□ -0.55
Chd8-212ENSMUST00000200169 Fgd1P52734 960 aa11.6□□□□□ -0.55
Chd8-212ENSMUST00000200169 Prdm10Q3UTQ7 1184 aa11.55□□□□□ -0.56
Chd8-212ENSMUST00000200169 Noc3lQ8VI84 807 aaKnown RBP11.55□□□□□ -0.56
Chd8-212ENSMUST00000200169 Pcgf6Q99NA9 353 aa11.52□□□□□ -0.57
Chd8-212ENSMUST00000200169 PtmaP26350 111 aa11.51□□□□□ -0.57
Chd8-212ENSMUST00000200169 Ifnlr1Q8CGK5 535 aa11.51□□□□□ -0.57
Chd8-212ENSMUST00000200169 Supt5hO55201 1082 aaKnown RBP11.5□□□□□ -0.57
Chd8-212ENSMUST00000200169 Zbtb4Q5F293 982 aa11.5□□□□□ -0.57
Chd8-212ENSMUST00000200169 Mak16Q8BGS0 296 aaKnown RBP11.5□□□□□ -0.57
Chd8-212ENSMUST00000200169 Safb2Q80YR5 991 aaKnown RBP11.49□□□□□ -0.57
Chd8-212ENSMUST00000200169 BccipQ9CWI3 316 aa11.49□□□□□ -0.57
Chd8-212ENSMUST00000200169 Plppr3Q7TPB0 716 aa11.48□□□□□ -0.57
Chd8-212ENSMUST00000200169 SetQ9EQU5 289 aaKnown RBP11.48□□□□□ -0.57
Chd8-212ENSMUST00000200169 Calcoco2A2A6M5 331 aa11.47□□□□□ -0.57
Chd8-212ENSMUST00000200169 Prm3Q62100 101 aa11.47□□□□□ -0.57
Chd8-212ENSMUST00000200169 Vsig10D3YX43 558 aa11.46□□□□□ -0.57
Chd8-212ENSMUST00000200169 Rangap1P46061 589 aaKnown RBP11.45□□□□□ -0.58
Chd8-212ENSMUST00000200169 Ppargc1bQ8VHJ7 1014 aa11.44□□□□□ -0.58
Chd8-212ENSMUST00000200169 Calr4Q3TQS0 420 aa11.42□□□□□ -0.58
Chd8-212ENSMUST00000200169 ClspnQ80YR7 1315 aa11.41□□□□□ -0.58
Chd8-212ENSMUST00000200169 Npm1Q61937 292 aaKnown RBP11.4□□□□□ -0.58
Chd8-212ENSMUST00000200169 Dnai2A2AC93 623 aa11.39□□□□□ -0.59
Chd8-212ENSMUST00000200169 Gm973E9Q295 1059 aa11.38□□□□□ -0.59
Chd8-212ENSMUST00000200169 Clstn1Q9EPL2 979 aa11.38□□□□□ -0.59
Chd8-212ENSMUST00000200169 Pes1Q9EQ61 584 aaKnown RBP11.38□□□□□ -0.59
Chd8-212ENSMUST00000200169 Eif4g2Q62448 906 aaKnown RBP11.37□□□□□ -0.59
Chd8-212ENSMUST00000200169 Znf316Q6PGE4 1016 aa11.36□□□□□ -0.59
Chd8-212ENSMUST00000200169 Tnnt2P50752 301 aa11.36□□□□□ -0.59
Chd8-212ENSMUST00000200169 Htatsf1Q8BGC0 757 aa11.36□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms