RNA–Protein interactions for RNA: ENSMUST00000199078.1

Trav4-1-201, mousemouse

BASIC

Gene Trav4-1, Length 330 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-1-201ENSMUST00000199078 Gm35339A0A140LHH9 1649 aa22.01■■□□□ 1.11
Trav4-1-201ENSMUST00000199078 NischQ80TM9 1593 aa21.64■■□□□ 1.05
Trav4-1-201ENSMUST00000199078 Abcc8B2RUS7 1588 aa21■□□□□ 0.95
Trav4-1-201ENSMUST00000199078 Abcc9P70170 1546 aa20.93■□□□□ 0.94
Trav4-1-201ENSMUST00000199078 ScribQ80U72 1612 aa20.45■□□□□ 0.87
Trav4-1-201ENSMUST00000199078 NacadQ5SWP3 1504 aa19.74■□□□□ 0.75
Trav4-1-201ENSMUST00000199078 Kdm5dQ62240 1548 aa19.7■□□□□ 0.74
Trav4-1-201ENSMUST00000199078 Sycp2Q9CUU3 1500 aa19.37■□□□□ 0.69
Trav4-1-201ENSMUST00000199078 Dcaf1Q80TR8 1506 aa19.21■□□□□ 0.67
Trav4-1-201ENSMUST00000199078 BicraF8VPZ9 1578 aa19.19■□□□□ 0.66
Trav4-1-201ENSMUST00000199078 Dnajc5bQ9CQ94 199 aa19.18■□□□□ 0.66
Trav4-1-201ENSMUST00000199078 Rb1cc1Q9ESK9 1588 aa18.84■□□□□ 0.61
Trav4-1-201ENSMUST00000199078 Pds5bQ4VA53 1446 aaKnown RBP18.68■□□□□ 0.58
Trav4-1-201ENSMUST00000199078 Thoc2B1AZI6 1594 aaKnown RBP18.65■□□□□ 0.58
Trav4-1-201ENSMUST00000199078 Baz1aO88379 1555 aa18.52■□□□□ 0.56
Trav4-1-201ENSMUST00000199078 Crybg2B7ZCC2 1516 aa18.47■□□□□ 0.55
Trav4-1-201ENSMUST00000199078 Rhox8Q6VSS7 320 aa18.46■□□□□ 0.55
Trav4-1-201ENSMUST00000199078 Atad2bE9Q166 1460 aaKnown RBP18.44■□□□□ 0.54
Trav4-1-201ENSMUST00000199078 Ccdc180J3QNE4 1664 aa18.4■□□□□ 0.54
Trav4-1-201ENSMUST00000199078 Zcchc6Q5BLK4 1491 aaKnown RBP18.36■□□□□ 0.53
Trav4-1-201ENSMUST00000199078 Cc2d2aQ8CFW7 1633 aa18.35■□□□□ 0.53
Trav4-1-201ENSMUST00000199078 Ercc6F8VPZ5 1481 aa18.28■□□□□ 0.52
Trav4-1-201ENSMUST00000199078 Smarca2Q6DIC0 1577 aa18.21■□□□□ 0.51
Trav4-1-201ENSMUST00000199078 Smarca4Q3TKT4 1613 aaKnown RBP18.16■□□□□ 0.5
Trav4-1-201ENSMUST00000199078 Fam135aQ6NS59 1506 aa18.14■□□□□ 0.49
Trav4-1-201ENSMUST00000199078 Iqgap2Q3UQ44 1575 aa18.13■□□□□ 0.49
Trav4-1-201ENSMUST00000199078 Cecr2E9Q2Z1 1453 aa18.08■□□□□ 0.49
Trav4-1-201ENSMUST00000199078 Wdr62Q3U3T8 1523 aa18.03■□□□□ 0.48
Trav4-1-201ENSMUST00000199078 Frmpd1A2AKB4 1549 aa18.01■□□□□ 0.47
Trav4-1-201ENSMUST00000199078 Phldb1Q6PDH0 1371 aaKnown RBP17.96■□□□□ 0.47
Trav4-1-201ENSMUST00000199078 Ubl4bQ9CQ84 188 aa17.87■□□□□ 0.45
Trav4-1-201ENSMUST00000199078 Baz1bQ9Z277 1479 aa17.86■□□□□ 0.45
Trav4-1-201ENSMUST00000199078 Mrc2Q64449 1479 aa17.75■□□□□ 0.43
Trav4-1-201ENSMUST00000199078 Unc13aQ4KUS2 1712 aa17.73■□□□□ 0.43
Trav4-1-201ENSMUST00000199078 Dnajc5P60904 198 aa17.62■□□□□ 0.41
Trav4-1-201ENSMUST00000199078 CftrP26361 1476 aa17.58■□□□□ 0.41
Trav4-1-201ENSMUST00000199078 Trim41Q5NCC3 630 aa17.58■□□□□ 0.4
Trav4-1-201ENSMUST00000199078 Cttnbp2B9EJA2 1648 aa17.54■□□□□ 0.4
Trav4-1-201ENSMUST00000199078 Synj1Q8CHC4 1574 aa17.53■□□□□ 0.4
Trav4-1-201ENSMUST00000199078 Brd4Q9ESU6 1400 aaKnown RBP17.43■□□□□ 0.38
Trav4-1-201ENSMUST00000199078 Lrriq1Q0P5X1 1673 aa17.39■□□□□ 0.37
Trav4-1-201ENSMUST00000199078 Ccdc136Q3TVA9 1136 aa17.35■□□□□ 0.37
Trav4-1-201ENSMUST00000199078 Rtl1Q7M732 1744 aa17.35■□□□□ 0.37
Trav4-1-201ENSMUST00000199078 Cux2P70298 1426 aa17.33■□□□□ 0.36
Trav4-1-201ENSMUST00000199078 Esf1Q3V1V3 845 aaKnown RBP17.3■□□□□ 0.36
Trav4-1-201ENSMUST00000199078 Rsf1E9PWW9 1441 aaKnown RBP17.29■□□□□ 0.36
Trav4-1-201ENSMUST00000199078 Kif15Q6P9L6 1387 aa17.28■□□□□ 0.36
Trav4-1-201ENSMUST00000199078 Kif21aQ9QXL2 1672 aa17.26■□□□□ 0.35
Trav4-1-201ENSMUST00000199078 Npm1Q61937 292 aaKnown RBP17.14■□□□□ 0.33
Trav4-1-201ENSMUST00000199078 Eif4g3Q80XI3 1579 aaKnown RBP17.12■□□□□ 0.33
Trav4-1-201ENSMUST00000199078 Lamc3Q9R0B6 1581 aa17.12■□□□□ 0.33
Trav4-1-201ENSMUST00000199078 Shroom2A2ALU4 1481 aa17.07■□□□□ 0.32
Trav4-1-201ENSMUST00000199078 Cep164Q5DU05 1446 aa17.03■□□□□ 0.32
Trav4-1-201ENSMUST00000199078 Urb2E9Q7L1 1524 aaKnown RBP16.99■□□□□ 0.31
Trav4-1-201ENSMUST00000199078 Plb1Q3TTY0 1478 aa16.95■□□□□ 0.3
Trav4-1-201ENSMUST00000199078 Dhx29Q6PGC1 1365 aaKnown RBP16.94■□□□□ 0.3
Trav4-1-201ENSMUST00000199078 Il27Q8K3I6 234 aa16.94■□□□□ 0.3
Trav4-1-201ENSMUST00000199078 Col17a1Q07563 1470 aa16.93■□□□□ 0.3
Trav4-1-201ENSMUST00000199078 Pabpn1Q8CCS6 302 aaKnown RBP16.89■□□□□ 0.29
Trav4-1-201ENSMUST00000199078 Ccdc18Q640L5 1455 aa16.87■□□□□ 0.29
Trav4-1-201ENSMUST00000199078 LrpprcQ6PB66 1392 aaKnown RBP16.85■□□□□ 0.29
Trav4-1-201ENSMUST00000199078 Crocc2F6XLV1 1638 aa16.85■□□□□ 0.29
Trav4-1-201ENSMUST00000199078 Top2bQ64511 1612 aa16.84■□□□□ 0.29
Trav4-1-201ENSMUST00000199078 TnnQ80Z71 1560 aa16.83■□□□□ 0.28
Trav4-1-201ENSMUST00000199078 Pelp1Q9DBD5 1123 aaKnown RBP16.8■□□□□ 0.28
Trav4-1-201ENSMUST00000199078 Camsap1A2AHC3 1581 aa16.79■□□□□ 0.28
Trav4-1-201ENSMUST00000199078 Rusc2Q80U22 1514 aa16.76■□□□□ 0.27
Trav4-1-201ENSMUST00000199078 Ift140E9PY46 1464 aa16.75■□□□□ 0.27
Trav4-1-201ENSMUST00000199078 PogzQ8BZH4 1409 aaKnown RBP16.72■□□□□ 0.27
Trav4-1-201ENSMUST00000199078 Golga3P55937 1487 aa16.71■□□□□ 0.27
Trav4-1-201ENSMUST00000199078 Cngb1E1AZ71 1325 aa16.7■□□□□ 0.26
Trav4-1-201ENSMUST00000199078 Duox2A2AQ99 1517 aa16.65■□□□□ 0.26
Trav4-1-201ENSMUST00000199078 Zcchc11B2RX14 1644 aaKnown RBP16.64■□□□□ 0.25
Trav4-1-201ENSMUST00000199078 Chic1Q8CBW7 227 aa16.62■□□□□ 0.25
Trav4-1-201ENSMUST00000199078 Disp1Q3TDN0 1521 aa16.6■□□□□ 0.25
Trav4-1-201ENSMUST00000199078 Fmn1Q05860 1466 aa16.59■□□□□ 0.25
Trav4-1-201ENSMUST00000199078 Grin2bQ01097 1482 aa16.54■□□□□ 0.24
Trav4-1-201ENSMUST00000199078 Nup160Q9Z0W3 1402 aaKnown RBP16.53■□□□□ 0.24
Trav4-1-201ENSMUST00000199078 Cc2d2bA0A286YDU8 1405 aa16.52■□□□□ 0.23
Trav4-1-201ENSMUST00000199078 Samd9lQ69Z37 1561 aa16.51■□□□□ 0.23
Trav4-1-201ENSMUST00000199078 Mapk8ip2Q9ERE9 830 aa16.51■□□□□ 0.23
Trav4-1-201ENSMUST00000199078 Pcdh10E9PXQ7 1057 aa16.49■□□□□ 0.23
Trav4-1-201ENSMUST00000199078 Pbrm1Q8BSQ9 1634 aaKnown RBP16.48■□□□□ 0.23
Trav4-1-201ENSMUST00000199078 Setd1bQ8CFT2 1985 aa16.47■□□□□ 0.23
Trav4-1-201ENSMUST00000199078 Adgrl3Q80TS3 1537 aa16.46■□□□□ 0.23
Trav4-1-201ENSMUST00000199078 Arhgef5E9Q7D5 1581 aa16.43■□□□□ 0.22
Trav4-1-201ENSMUST00000199078 Rad54l2Q99NG0 1466 aa16.43■□□□□ 0.22
Trav4-1-201ENSMUST00000199078 Efcab5A0JP43 1406 aa16.43■□□□□ 0.22
Trav4-1-201ENSMUST00000199078 Ttbk1Q6PCN3 1308 aa16.43■□□□□ 0.22
Trav4-1-201ENSMUST00000199078 PtprkP35822 1457 aa16.42■□□□□ 0.22
Trav4-1-201ENSMUST00000199078 Cep170Q6A065 1588 aa16.4■□□□□ 0.22
Trav4-1-201ENSMUST00000199078 Gapvd1Q6PAR5 1458 aa16.4■□□□□ 0.22
Trav4-1-201ENSMUST00000199078 Fgd6Q69ZL1 1399 aa16.39■□□□□ 0.21
Trav4-1-201ENSMUST00000199078 Gm156Q58A37 223 aa16.39■□□□□ 0.21
Trav4-1-201ENSMUST00000199078 Grin2aP35436 1464 aa16.39■□□□□ 0.21
Trav4-1-201ENSMUST00000199078 AqrQ8CFQ3 1481 aaKnown RBP16.39■□□□□ 0.21
Trav4-1-201ENSMUST00000199078 Magi3Q9EQJ9 1476 aa16.37■□□□□ 0.21
Trav4-1-201ENSMUST00000199078 PtprtQ99M80 1454 aa16.34■□□□□ 0.21
Trav4-1-201ENSMUST00000199078 AknaQ80VW7 1404 aa16.31■□□□□ 0.2
Trav4-1-201ENSMUST00000199078 Abcc1O35379 1528 aa16.28■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 55.5 ms