RNA–Protein interactions for RNA: ENSMUST00000188715.1

1700110C19Rik-202, mousemouse

TSL 1 (best) BASIC

Gene 1700110C19Rik, Length 717 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
1700110C19Rik-202ENSMUST00000188715 Gm35339A0A140LHH9 1649 aa15.41■□□□□ 0.06
1700110C19Rik-202ENSMUST00000188715 Abcc9P70170 1546 aa15.21■□□□□ 0.03
1700110C19Rik-202ENSMUST00000188715 NischQ80TM9 1593 aa15.02□□□□□ -0.01
1700110C19Rik-202ENSMUST00000188715 Abcc8B2RUS7 1588 aa14.67□□□□□ -0.06
1700110C19Rik-202ENSMUST00000188715 ScribQ80U72 1612 aa14.57□□□□□ -0.08
1700110C19Rik-202ENSMUST00000188715 Chic1Q8CBW7 227 aa14.48□□□□□ -0.09
1700110C19Rik-202ENSMUST00000188715 Dnajc5bQ9CQ94 199 aa14.38□□□□□ -0.11
1700110C19Rik-202ENSMUST00000188715 Mapk8ip2Q9ERE9 830 aa14.25□□□□□ -0.13
1700110C19Rik-202ENSMUST00000188715 NacadQ5SWP3 1504 aa13.97□□□□□ -0.17
1700110C19Rik-202ENSMUST00000188715 Kdm5dQ62240 1548 aa13.94□□□□□ -0.18
1700110C19Rik-202ENSMUST00000188715 Sycp2Q9CUU3 1500 aa13.74□□□□□ -0.21
1700110C19Rik-202ENSMUST00000188715 BicraF8VPZ9 1578 aa13.7□□□□□ -0.22
1700110C19Rik-202ENSMUST00000188715 Dnajc5P60904 198 aa13.57□□□□□ -0.24
1700110C19Rik-202ENSMUST00000188715 Thoc2B1AZI6 1594 aaKnown RBP13.54□□□□□ -0.24
1700110C19Rik-202ENSMUST00000188715 Pds5bQ4VA53 1446 aaKnown RBP13.39□□□□□ -0.27
1700110C19Rik-202ENSMUST00000188715 Cc2d2aQ8CFW7 1633 aa13.36□□□□□ -0.27
1700110C19Rik-202ENSMUST00000188715 Trim41Q5NCC3 630 aa13.33□□□□□ -0.28
1700110C19Rik-202ENSMUST00000188715 Dcaf1Q80TR8 1506 aa13.31□□□□□ -0.28
1700110C19Rik-202ENSMUST00000188715 Ercc6F8VPZ5 1481 aa13.14□□□□□ -0.31
1700110C19Rik-202ENSMUST00000188715 Atad2bE9Q166 1460 aaKnown RBP13.13□□□□□ -0.31
1700110C19Rik-202ENSMUST00000188715 Fam135aQ6NS59 1506 aa13.08□□□□□ -0.31
1700110C19Rik-202ENSMUST00000188715 Rb1cc1Q9ESK9 1588 aa13.06□□□□□ -0.32
1700110C19Rik-202ENSMUST00000188715 Phf23Q8BSN5 401 aa12.99□□□□□ -0.33
1700110C19Rik-202ENSMUST00000188715 Smarca2Q6DIC0 1577 aa12.94□□□□□ -0.34
1700110C19Rik-202ENSMUST00000188715 Ubl4bQ9CQ84 188 aa12.88□□□□□ -0.35
1700110C19Rik-202ENSMUST00000188715 Phldb1Q6PDH0 1371 aaKnown RBP12.87□□□□□ -0.35
1700110C19Rik-202ENSMUST00000188715 Iqgap2Q3UQ44 1575 aa12.85□□□□□ -0.35
1700110C19Rik-202ENSMUST00000188715 Frmpd1A2AKB4 1549 aa12.82□□□□□ -0.36
1700110C19Rik-202ENSMUST00000188715 Zcchc6Q5BLK4 1491 aaKnown RBP12.81□□□□□ -0.36
1700110C19Rik-202ENSMUST00000188715 Mrc2Q64449 1479 aa12.81□□□□□ -0.36
1700110C19Rik-202ENSMUST00000188715 Wdr62Q3U3T8 1523 aa12.81□□□□□ -0.36
1700110C19Rik-202ENSMUST00000188715 Smarca4Q3TKT4 1613 aaKnown RBP12.8□□□□□ -0.36
1700110C19Rik-202ENSMUST00000188715 Baz1aO88379 1555 aa12.77□□□□□ -0.36
1700110C19Rik-202ENSMUST00000188715 Baz1bQ9Z277 1479 aa12.75□□□□□ -0.37
1700110C19Rik-202ENSMUST00000188715 Crybg2B7ZCC2 1516 aa12.71□□□□□ -0.38
1700110C19Rik-202ENSMUST00000188715 Unc13aQ4KUS2 1712 aa12.68□□□□□ -0.38
1700110C19Rik-202ENSMUST00000188715 Cecr2E9Q2Z1 1453 aa12.64□□□□□ -0.39
1700110C19Rik-202ENSMUST00000188715 Lrriq1Q0P5X1 1673 aa12.64□□□□□ -0.39
1700110C19Rik-202ENSMUST00000188715 Ccdc180J3QNE4 1664 aa12.58□□□□□ -0.4
1700110C19Rik-202ENSMUST00000188715 Col17a1Q07563 1470 aa12.58□□□□□ -0.4
1700110C19Rik-202ENSMUST00000188715 Shroom2A2ALU4 1481 aa12.56□□□□□ -0.4
1700110C19Rik-202ENSMUST00000188715 Rsf1E9PWW9 1441 aaKnown RBP12.54□□□□□ -0.4
1700110C19Rik-202ENSMUST00000188715 Rhox8Q6VSS7 320 aa12.52□□□□□ -0.41
1700110C19Rik-202ENSMUST00000188715 Pcdh10E9PXQ7 1057 aa12.42□□□□□ -0.42
1700110C19Rik-202ENSMUST00000188715 Pabpn1Q8CCS6 302 aaKnown RBP12.41□□□□□ -0.42
1700110C19Rik-202ENSMUST00000188715 Kif21aQ9QXL2 1672 aa12.4□□□□□ -0.42
1700110C19Rik-202ENSMUST00000188715 Eif4g3Q80XI3 1579 aaKnown RBP12.39□□□□□ -0.43
1700110C19Rik-202ENSMUST00000188715 Plppr3Q7TPB0 716 aa12.39□□□□□ -0.43
1700110C19Rik-202ENSMUST00000188715 Top2bQ64511 1612 aa12.38□□□□□ -0.43
1700110C19Rik-202ENSMUST00000188715 Pelp1Q9DBD5 1123 aaKnown RBP12.37□□□□□ -0.43
1700110C19Rik-202ENSMUST00000188715 Gab3Q8BSM5 595 aa12.36□□□□□ -0.43
1700110C19Rik-202ENSMUST00000188715 Cux2P70298 1426 aa12.31□□□□□ -0.44
1700110C19Rik-202ENSMUST00000188715 Ttbk1Q6PCN3 1308 aa12.21□□□□□ -0.45
1700110C19Rik-202ENSMUST00000188715 Zcchc11B2RX14 1644 aaKnown RBP12.21□□□□□ -0.46
1700110C19Rik-202ENSMUST00000188715 Kif15Q6P9L6 1387 aa12.19□□□□□ -0.46
1700110C19Rik-202ENSMUST00000188715 Arhgef5E9Q7D5 1581 aa12.19□□□□□ -0.46
1700110C19Rik-202ENSMUST00000188715 Cttnbp2B9EJA2 1648 aa12.18□□□□□ -0.46
1700110C19Rik-202ENSMUST00000188715 Npm1Q61937 292 aaKnown RBP12.17□□□□□ -0.46
1700110C19Rik-202ENSMUST00000188715 Urb2E9Q7L1 1524 aaKnown RBP12.16□□□□□ -0.46
1700110C19Rik-202ENSMUST00000188715 CftrP26361 1476 aa12.16□□□□□ -0.46
1700110C19Rik-202ENSMUST00000188715 Plb1Q3TTY0 1478 aa12.14□□□□□ -0.47
1700110C19Rik-202ENSMUST00000188715 Synj1Q8CHC4 1574 aa12.13□□□□□ -0.47
1700110C19Rik-202ENSMUST00000188715 Esf1Q3V1V3 845 aaKnown RBP12.06□□□□□ -0.48
1700110C19Rik-202ENSMUST00000188715 Adgrl3Q80TS3 1537 aa12.05□□□□□ -0.48
1700110C19Rik-202ENSMUST00000188715 Cep164Q5DU05 1446 aa12.03□□□□□ -0.48
1700110C19Rik-202ENSMUST00000188715 Rusc2Q80U22 1514 aa12.01□□□□□ -0.49
1700110C19Rik-202ENSMUST00000188715 Dhx29Q6PGC1 1365 aaKnown RBP12□□□□□ -0.49
1700110C19Rik-202ENSMUST00000188715 Il27Q8K3I6 234 aa11.99□□□□□ -0.49
1700110C19Rik-202ENSMUST00000188715 Plekhg3Q4VAC9 1341 aa11.97□□□□□ -0.49
1700110C19Rik-202ENSMUST00000188715 PtprtQ99M80 1454 aa11.95□□□□□ -0.5
1700110C19Rik-202ENSMUST00000188715 Lamc3Q9R0B6 1581 aa11.95□□□□□ -0.5
1700110C19Rik-202ENSMUST00000188715 Gm156Q58A37 223 aa11.94□□□□□ -0.5
1700110C19Rik-202ENSMUST00000188715 PtprkP35822 1457 aa11.94□□□□□ -0.5
1700110C19Rik-202ENSMUST00000188715 Brd4Q9ESU6 1400 aaKnown RBP11.94□□□□□ -0.5
1700110C19Rik-202ENSMUST00000188715 Crocc2F6XLV1 1638 aa11.93□□□□□ -0.5
1700110C19Rik-202ENSMUST00000188715 Cep170Q6A065 1588 aa11.92□□□□□ -0.5
1700110C19Rik-202ENSMUST00000188715 Ift140E9PY46 1464 aa11.89□□□□□ -0.51
1700110C19Rik-202ENSMUST00000188715 Gapvd1Q6PAR5 1458 aa11.86□□□□□ -0.51
1700110C19Rik-202ENSMUST00000188715 LrpprcQ6PB66 1392 aaKnown RBP11.84□□□□□ -0.51
1700110C19Rik-202ENSMUST00000188715 Ccdc136Q3TVA9 1136 aa11.84□□□□□ -0.51
1700110C19Rik-202ENSMUST00000188715 Senp3Q9EP97 568 aaKnown RBP11.83□□□□□ -0.52
1700110C19Rik-202ENSMUST00000188715 Pprc1Q6NZN1 1644 aa11.81□□□□□ -0.52
1700110C19Rik-202ENSMUST00000188715 Ccdc18Q640L5 1455 aa11.8□□□□□ -0.52
1700110C19Rik-202ENSMUST00000188715 Setd1bQ8CFT2 1985 aa11.79□□□□□ -0.52
1700110C19Rik-202ENSMUST00000188715 Ppp1r18Q8BQ30 594 aa11.76□□□□□ -0.53
1700110C19Rik-202ENSMUST00000188715 Disp1Q3TDN0 1521 aa11.74□□□□□ -0.53
1700110C19Rik-202ENSMUST00000188715 PogzQ8BZH4 1409 aaKnown RBP11.7□□□□□ -0.54
1700110C19Rik-202ENSMUST00000188715 Fgd6Q69ZL1 1399 aa11.7□□□□□ -0.54
1700110C19Rik-202ENSMUST00000188715 Camsap1A2AHC3 1581 aa11.7□□□□□ -0.54
1700110C19Rik-202ENSMUST00000188715 Rapgef2Q8CHG7 1496 aa11.7□□□□□ -0.54
1700110C19Rik-202ENSMUST00000188715 AknaQ80VW7 1404 aa11.69□□□□□ -0.54
1700110C19Rik-202ENSMUST00000188715 Cc2d2bA0A286YDU8 1405 aa11.68□□□□□ -0.54
1700110C19Rik-202ENSMUST00000188715 Ythdc2B2RR83 1445 aaKnown RBP11.68□□□□□ -0.54
1700110C19Rik-202ENSMUST00000188715 Cypt1Q8CH20 168 aa11.67□□□□□ -0.54
1700110C19Rik-202ENSMUST00000188715 Duox2A2AQ99 1517 aa11.66□□□□□ -0.54
1700110C19Rik-202ENSMUST00000188715 Golga3P55937 1487 aa11.66□□□□□ -0.54
1700110C19Rik-202ENSMUST00000188715 Nup160Q9Z0W3 1402 aaKnown RBP11.66□□□□□ -0.54
1700110C19Rik-202ENSMUST00000188715 Rtl1Q7M732 1744 aa11.66□□□□□ -0.54
1700110C19Rik-202ENSMUST00000188715 Abcc1O35379 1528 aa11.65□□□□□ -0.54
1700110C19Rik-202ENSMUST00000188715 Cyb5rlB1AS42 316 aa11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms