RNA–Protein interactions for RNA: ENSMUST00000183488.1

Trav6-5-202, Transcript of T cell receptor alpha variable 6-5 (Fragment), mousemouse

APPRIS ALT2 BASIC

Gene Trav6-5, Length 335 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5-202ENSMUST00000183488 Gm35339A0A140LHH9 1649 aa12.41□□□□□ -0.42
Trav6-5-202ENSMUST00000183488 NischQ80TM9 1593 aa12.27□□□□□ -0.44
Trav6-5-202ENSMUST00000183488 Abcc8B2RUS7 1588 aa11.92□□□□□ -0.5
Trav6-5-202ENSMUST00000183488 Abcc9P70170 1546 aa11.91□□□□□ -0.5
Trav6-5-202ENSMUST00000183488 ScribQ80U72 1612 aa11.53□□□□□ -0.56
Trav6-5-202ENSMUST00000183488 NacadQ5SWP3 1504 aa11.27□□□□□ -0.61
Trav6-5-202ENSMUST00000183488 Kdm5dQ62240 1548 aa11.15□□□□□ -0.62
Trav6-5-202ENSMUST00000183488 Sycp2Q9CUU3 1500 aa11.04□□□□□ -0.64
Trav6-5-202ENSMUST00000183488 Dnajc5bQ9CQ94 199 aa11□□□□□ -0.65
Trav6-5-202ENSMUST00000183488 Dcaf1Q80TR8 1506 aa10.94□□□□□ -0.66
Trav6-5-202ENSMUST00000183488 BicraF8VPZ9 1578 aa10.86□□□□□ -0.67
Trav6-5-202ENSMUST00000183488 Pds5bQ4VA53 1446 aaKnown RBP10.73□□□□□ -0.69
Trav6-5-202ENSMUST00000183488 Rb1cc1Q9ESK9 1588 aa10.63□□□□□ -0.71
Trav6-5-202ENSMUST00000183488 Crybg2B7ZCC2 1516 aa10.6□□□□□ -0.71
Trav6-5-202ENSMUST00000183488 Thoc2B1AZI6 1594 aaKnown RBP10.58□□□□□ -0.72
Trav6-5-202ENSMUST00000183488 Atad2bE9Q166 1460 aaKnown RBP10.56□□□□□ -0.72
Trav6-5-202ENSMUST00000183488 Rhox8Q6VSS7 320 aa10.52□□□□□ -0.73
Trav6-5-202ENSMUST00000183488 Baz1aO88379 1555 aa10.49□□□□□ -0.73
Trav6-5-202ENSMUST00000183488 Ercc6F8VPZ5 1481 aa10.44□□□□□ -0.74
Trav6-5-202ENSMUST00000183488 Cc2d2aQ8CFW7 1633 aa10.43□□□□□ -0.74
Trav6-5-202ENSMUST00000183488 Zcchc6Q5BLK4 1491 aaKnown RBP10.42□□□□□ -0.74
Trav6-5-202ENSMUST00000183488 Ccdc180J3QNE4 1664 aa10.41□□□□□ -0.74
Trav6-5-202ENSMUST00000183488 Smarca2Q6DIC0 1577 aa10.36□□□□□ -0.75
Trav6-5-202ENSMUST00000183488 Phldb1Q6PDH0 1371 aaKnown RBP10.34□□□□□ -0.75
Trav6-5-202ENSMUST00000183488 Fam135aQ6NS59 1506 aa10.33□□□□□ -0.76
Trav6-5-202ENSMUST00000183488 Ubl4bQ9CQ84 188 aa10.32□□□□□ -0.76
Trav6-5-202ENSMUST00000183488 Baz1bQ9Z277 1479 aa10.31□□□□□ -0.76
Trav6-5-202ENSMUST00000183488 Smarca4Q3TKT4 1613 aaKnown RBP10.31□□□□□ -0.76
Trav6-5-202ENSMUST00000183488 Mapk8ip2Q9ERE9 830 aa10.3□□□□□ -0.76
Trav6-5-202ENSMUST00000183488 Iqgap2Q3UQ44 1575 aa10.28□□□□□ -0.76
Trav6-5-202ENSMUST00000183488 Frmpd1A2AKB4 1549 aa10.26□□□□□ -0.77
Trav6-5-202ENSMUST00000183488 Cecr2E9Q2Z1 1453 aa10.25□□□□□ -0.77
Trav6-5-202ENSMUST00000183488 Dnajc5P60904 198 aa10.24□□□□□ -0.77
Trav6-5-202ENSMUST00000183488 Wdr62Q3U3T8 1523 aa10.23□□□□□ -0.77
Trav6-5-202ENSMUST00000183488 Mrc2Q64449 1479 aa10.14□□□□□ -0.79
Trav6-5-202ENSMUST00000183488 Trim41Q5NCC3 630 aa10.1□□□□□ -0.79
Trav6-5-202ENSMUST00000183488 CftrP26361 1476 aa10□□□□□ -0.81
Trav6-5-202ENSMUST00000183488 Brd4Q9ESU6 1400 aaKnown RBP9.96□□□□□ -0.82
Trav6-5-202ENSMUST00000183488 Esf1Q3V1V3 845 aaKnown RBP9.94□□□□□ -0.82
Trav6-5-202ENSMUST00000183488 Unc13aQ4KUS2 1712 aa9.93□□□□□ -0.82
Trav6-5-202ENSMUST00000183488 Rsf1E9PWW9 1441 aaKnown RBP9.92□□□□□ -0.82
Trav6-5-202ENSMUST00000183488 Cux2P70298 1426 aa9.91□□□□□ -0.82
Trav6-5-202ENSMUST00000183488 Cttnbp2B9EJA2 1648 aa9.91□□□□□ -0.82
Trav6-5-202ENSMUST00000183488 Ccdc136Q3TVA9 1136 aa9.9□□□□□ -0.82
Trav6-5-202ENSMUST00000183488 Npm1Q61937 292 aaKnown RBP9.9□□□□□ -0.82
Trav6-5-202ENSMUST00000183488 Synj1Q8CHC4 1574 aa9.88□□□□□ -0.83
Trav6-5-202ENSMUST00000183488 Kif15Q6P9L6 1387 aa9.88□□□□□ -0.83
Trav6-5-202ENSMUST00000183488 Lrriq1Q0P5X1 1673 aa9.83□□□□□ -0.84
Trav6-5-202ENSMUST00000183488 Shroom2A2ALU4 1481 aa9.81□□□□□ -0.84
Trav6-5-202ENSMUST00000183488 Pabpn1Q8CCS6 302 aaKnown RBP9.79□□□□□ -0.84
Trav6-5-202ENSMUST00000183488 Chic1Q8CBW7 227 aa9.78□□□□□ -0.84
Trav6-5-202ENSMUST00000183488 Cep164Q5DU05 1446 aa9.77□□□□□ -0.85
Trav6-5-202ENSMUST00000183488 Kif21aQ9QXL2 1672 aa9.74□□□□□ -0.85
Trav6-5-202ENSMUST00000183488 Col17a1Q07563 1470 aa9.72□□□□□ -0.85
Trav6-5-202ENSMUST00000183488 Lamc3Q9R0B6 1581 aa9.71□□□□□ -0.85
Trav6-5-202ENSMUST00000183488 Eif4g3Q80XI3 1579 aaKnown RBP9.71□□□□□ -0.86
Trav6-5-202ENSMUST00000183488 Urb2E9Q7L1 1524 aaKnown RBP9.69□□□□□ -0.86
Trav6-5-202ENSMUST00000183488 Dhx29Q6PGC1 1365 aaKnown RBP9.69□□□□□ -0.86
Trav6-5-202ENSMUST00000183488 Il27Q8K3I6 234 aa9.69□□□□□ -0.86
Trav6-5-202ENSMUST00000183488 Rtl1Q7M732 1744 aa9.68□□□□□ -0.86
Trav6-5-202ENSMUST00000183488 Plb1Q3TTY0 1478 aa9.67□□□□□ -0.86
Trav6-5-202ENSMUST00000183488 Ccdc18Q640L5 1455 aa9.66□□□□□ -0.86
Trav6-5-202ENSMUST00000183488 LrpprcQ6PB66 1392 aaKnown RBP9.66□□□□□ -0.86
Trav6-5-202ENSMUST00000183488 Pelp1Q9DBD5 1123 aaKnown RBP9.66□□□□□ -0.86
Trav6-5-202ENSMUST00000183488 Top2bQ64511 1612 aa9.63□□□□□ -0.87
Trav6-5-202ENSMUST00000183488 Ift140E9PY46 1464 aa9.59□□□□□ -0.87
Trav6-5-202ENSMUST00000183488 PogzQ8BZH4 1409 aaKnown RBP9.55□□□□□ -0.88
Trav6-5-202ENSMUST00000183488 Zcchc11B2RX14 1644 aaKnown RBP9.54□□□□□ -0.88
Trav6-5-202ENSMUST00000183488 Crocc2F6XLV1 1638 aa9.54□□□□□ -0.88
Trav6-5-202ENSMUST00000183488 Cngb1E1AZ71 1325 aa9.52□□□□□ -0.89
Trav6-5-202ENSMUST00000183488 Rusc2Q80U22 1514 aa9.51□□□□□ -0.89
Trav6-5-202ENSMUST00000183488 Duox2A2AQ99 1517 aa9.5□□□□□ -0.89
Trav6-5-202ENSMUST00000183488 Camsap1A2AHC3 1581 aa9.5□□□□□ -0.89
Trav6-5-202ENSMUST00000183488 Golga3P55937 1487 aa9.49□□□□□ -0.89
Trav6-5-202ENSMUST00000183488 TnnQ80Z71 1560 aa9.49□□□□□ -0.89
Trav6-5-202ENSMUST00000183488 Cc2d2bA0A286YDU8 1405 aa9.48□□□□□ -0.89
Trav6-5-202ENSMUST00000183488 Disp1Q3TDN0 1521 aa9.48□□□□□ -0.89
Trav6-5-202ENSMUST00000183488 Pcdh10E9PXQ7 1057 aa9.48□□□□□ -0.89
Trav6-5-202ENSMUST00000183488 Gm156Q58A37 223 aa9.46□□□□□ -0.9
Trav6-5-202ENSMUST00000183488 Ttbk1Q6PCN3 1308 aa9.46□□□□□ -0.9
Trav6-5-202ENSMUST00000183488 Efcab5A0JP43 1406 aa9.44□□□□□ -0.9
Trav6-5-202ENSMUST00000183488 PtprkP35822 1457 aa9.43□□□□□ -0.9
Trav6-5-202ENSMUST00000183488 Fmn1Q05860 1466 aa9.43□□□□□ -0.9
Trav6-5-202ENSMUST00000183488 Nup160Q9Z0W3 1402 aaKnown RBP9.43□□□□□ -0.9
Trav6-5-202ENSMUST00000183488 Fgd6Q69ZL1 1399 aa9.43□□□□□ -0.9
Trav6-5-202ENSMUST00000183488 Adgrl3Q80TS3 1537 aa9.42□□□□□ -0.9
Trav6-5-202ENSMUST00000183488 Grin2bQ01097 1482 aa9.4□□□□□ -0.91
Trav6-5-202ENSMUST00000183488 Arhgef5E9Q7D5 1581 aa9.39□□□□□ -0.91
Trav6-5-202ENSMUST00000183488 Gapvd1Q6PAR5 1458 aa9.37□□□□□ -0.91
Trav6-5-202ENSMUST00000183488 PtprtQ99M80 1454 aa9.36□□□□□ -0.91
Trav6-5-202ENSMUST00000183488 CadpsQ80TJ1 1355 aa9.35□□□□□ -0.91
Trav6-5-202ENSMUST00000183488 AqrQ8CFQ3 1481 aaKnown RBP9.34□□□□□ -0.91
Trav6-5-202ENSMUST00000183488 Pbrm1Q8BSQ9 1634 aaKnown RBP9.34□□□□□ -0.91
Trav6-5-202ENSMUST00000183488 Grin2aP35436 1464 aa9.33□□□□□ -0.92
Trav6-5-202ENSMUST00000183488 Rad54l2Q99NG0 1466 aa9.33□□□□□ -0.92
Trav6-5-202ENSMUST00000183488 Cep170Q6A065 1588 aa9.33□□□□□ -0.92
Trav6-5-202ENSMUST00000183488 Ythdc2B2RR83 1445 aaKnown RBP9.31□□□□□ -0.92
Trav6-5-202ENSMUST00000183488 AknaQ80VW7 1404 aa9.31□□□□□ -0.92
Trav6-5-202ENSMUST00000183488 Samd9lQ69Z37 1561 aa9.31□□□□□ -0.92
Trav6-5-202ENSMUST00000183488 Magi3Q9EQJ9 1476 aa9.28□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 57.5 ms