RNA–Protein interactions for RNA: ENSMUST00000174710.1

Apoe-210, Transcript of Apolipoprotein E, mousemouse

TSL 1 (best) BASIC

Gene Apoe, Length 514 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Apoe-210ENSMUST00000174710 Gm35339A0A140LHH9 1649 aa26.39■■□□□ 1.81
Apoe-210ENSMUST00000174710 NischQ80TM9 1593 aa25.96■■□□□ 1.75
Apoe-210ENSMUST00000174710 Abcc9P70170 1546 aa25.15■■□□□ 1.62
Apoe-210ENSMUST00000174710 Abcc8B2RUS7 1588 aa25.14■■□□□ 1.61
Apoe-210ENSMUST00000174710 ScribQ80U72 1612 aa24.38■■□□□ 1.49
Apoe-210ENSMUST00000174710 Kdm5dQ62240 1548 aa23.49■■□□□ 1.35
Apoe-210ENSMUST00000174710 NacadQ5SWP3 1504 aa23.43■■□□□ 1.34
Apoe-210ENSMUST00000174710 Dcaf1Q80TR8 1506 aa23.07■■□□□ 1.28
Apoe-210ENSMUST00000174710 Sycp2Q9CUU3 1500 aa23.03■■□□□ 1.28
Apoe-210ENSMUST00000174710 BicraF8VPZ9 1578 aa22.8■■□□□ 1.24
Apoe-210ENSMUST00000174710 Rb1cc1Q9ESK9 1588 aa22.66■■□□□ 1.22
Apoe-210ENSMUST00000174710 Rhox8Q6VSS7 320 aa22.3■■□□□ 1.16
Apoe-210ENSMUST00000174710 Baz1aO88379 1555 aa22.29■■□□□ 1.16
Apoe-210ENSMUST00000174710 Dnajc5bQ9CQ94 199 aa22.27■■□□□ 1.16
Apoe-210ENSMUST00000174710 Ccdc180J3QNE4 1664 aa22.23■■□□□ 1.15
Apoe-210ENSMUST00000174710 Crybg2B7ZCC2 1516 aa22.1■■□□□ 1.13
Apoe-210ENSMUST00000174710 Pds5bQ4VA53 1446 aaKnown RBP21.99■■□□□ 1.11
Apoe-210ENSMUST00000174710 Thoc2B1AZI6 1594 aaKnown RBP21.99■■□□□ 1.11
Apoe-210ENSMUST00000174710 Zcchc6Q5BLK4 1491 aaKnown RBP21.98■■□□□ 1.11
Apoe-210ENSMUST00000174710 Atad2bE9Q166 1460 aaKnown RBP21.82■■□□□ 1.08
Apoe-210ENSMUST00000174710 Smarca4Q3TKT4 1613 aaKnown RBP21.67■■□□□ 1.06
Apoe-210ENSMUST00000174710 Cecr2E9Q2Z1 1453 aa21.67■■□□□ 1.06
Apoe-210ENSMUST00000174710 Smarca2Q6DIC0 1577 aa21.66■■□□□ 1.06
Apoe-210ENSMUST00000174710 Cc2d2aQ8CFW7 1633 aa21.62■■□□□ 1.05
Apoe-210ENSMUST00000174710 Iqgap2Q3UQ44 1575 aa21.59■■□□□ 1.05
Apoe-210ENSMUST00000174710 Ercc6F8VPZ5 1481 aa21.57■■□□□ 1.04
Apoe-210ENSMUST00000174710 Fam135aQ6NS59 1506 aa21.44■■□□□ 1.02
Apoe-210ENSMUST00000174710 Wdr62Q3U3T8 1523 aa21.4■■□□□ 1.02
Apoe-210ENSMUST00000174710 Frmpd1A2AKB4 1549 aa21.38■■□□□ 1.01
Apoe-210ENSMUST00000174710 Rtl1Q7M732 1744 aa21.29■■□□□ 1
Apoe-210ENSMUST00000174710 Unc13aQ4KUS2 1712 aa21.22■□□□□ 0.99
Apoe-210ENSMUST00000174710 Phldb1Q6PDH0 1371 aaKnown RBP21.17■□□□□ 0.98
Apoe-210ENSMUST00000174710 Synj1Q8CHC4 1574 aa21.11■□□□□ 0.97
Apoe-210ENSMUST00000174710 CftrP26361 1476 aa21.08■□□□□ 0.97
Apoe-210ENSMUST00000174710 Cttnbp2B9EJA2 1648 aa21.08■□□□□ 0.97
Apoe-210ENSMUST00000174710 Baz1bQ9Z277 1479 aa20.98■□□□□ 0.95
Apoe-210ENSMUST00000174710 Ubl4bQ9CQ84 188 aa20.97■□□□□ 0.95
Apoe-210ENSMUST00000174710 Ccdc136Q3TVA9 1136 aa20.93■□□□□ 0.94
Apoe-210ENSMUST00000174710 Brd4Q9ESU6 1400 aaKnown RBP20.93■□□□□ 0.94
Apoe-210ENSMUST00000174710 Mrc2Q64449 1479 aa20.89■□□□□ 0.94
Apoe-210ENSMUST00000174710 Esf1Q3V1V3 845 aaKnown RBP20.6■□□□□ 0.89
Apoe-210ENSMUST00000174710 Kif15Q6P9L6 1387 aa20.55■□□□□ 0.88
Apoe-210ENSMUST00000174710 Cux2P70298 1426 aa20.54■□□□□ 0.88
Apoe-210ENSMUST00000174710 Lrriq1Q0P5X1 1673 aa20.54■□□□□ 0.88
Apoe-210ENSMUST00000174710 Rsf1E9PWW9 1441 aaKnown RBP20.53■□□□□ 0.88
Apoe-210ENSMUST00000174710 Kif21aQ9QXL2 1672 aa20.51■□□□□ 0.87
Apoe-210ENSMUST00000174710 Lamc3Q9R0B6 1581 aa20.49■□□□□ 0.87
Apoe-210ENSMUST00000174710 Trim41Q5NCC3 630 aa20.45■□□□□ 0.86
Apoe-210ENSMUST00000174710 Top2bQ64511 1612 aa20.3■□□□□ 0.84
Apoe-210ENSMUST00000174710 TnnQ80Z71 1560 aa20.29■□□□□ 0.84
Apoe-210ENSMUST00000174710 Golga3P55937 1487 aa20.24■□□□□ 0.83
Apoe-210ENSMUST00000174710 Npm1Q61937 292 aaKnown RBP20.23■□□□□ 0.83
Apoe-210ENSMUST00000174710 Eif4g3Q80XI3 1579 aaKnown RBP20.2■□□□□ 0.82
Apoe-210ENSMUST00000174710 Cep164Q5DU05 1446 aa20.19■□□□□ 0.82
Apoe-210ENSMUST00000174710 Cngb1E1AZ71 1325 aa20.15■□□□□ 0.82
Apoe-210ENSMUST00000174710 Camsap1A2AHC3 1581 aa20.15■□□□□ 0.82
Apoe-210ENSMUST00000174710 Urb2E9Q7L1 1524 aaKnown RBP20.14■□□□□ 0.81
Apoe-210ENSMUST00000174710 Il27Q8K3I6 234 aa20.13■□□□□ 0.81
Apoe-210ENSMUST00000174710 Dhx29Q6PGC1 1365 aaKnown RBP20.11■□□□□ 0.81
Apoe-210ENSMUST00000174710 Ccdc18Q640L5 1455 aa20.1■□□□□ 0.81
Apoe-210ENSMUST00000174710 Plb1Q3TTY0 1478 aa20.09■□□□□ 0.81
Apoe-210ENSMUST00000174710 Crocc2F6XLV1 1638 aa20.05■□□□□ 0.8
Apoe-210ENSMUST00000174710 Dnajc5P60904 198 aa20.05■□□□□ 0.8
Apoe-210ENSMUST00000174710 LrpprcQ6PB66 1392 aaKnown RBP20.03■□□□□ 0.8
Apoe-210ENSMUST00000174710 Fmn1Q05860 1466 aa20■□□□□ 0.79
Apoe-210ENSMUST00000174710 PogzQ8BZH4 1409 aaKnown RBP19.94■□□□□ 0.78
Apoe-210ENSMUST00000174710 Shroom2A2ALU4 1481 aa19.92■□□□□ 0.78
Apoe-210ENSMUST00000174710 Duox2A2AQ99 1517 aa19.86■□□□□ 0.77
Apoe-210ENSMUST00000174710 Rusc2Q80U22 1514 aa19.86■□□□□ 0.77
Apoe-210ENSMUST00000174710 Ift140E9PY46 1464 aa19.84■□□□□ 0.77
Apoe-210ENSMUST00000174710 Grin2bQ01097 1482 aa19.83■□□□□ 0.76
Apoe-210ENSMUST00000174710 Samd9lQ69Z37 1561 aa19.8■□□□□ 0.76
Apoe-210ENSMUST00000174710 Setd1bQ8CFT2 1985 aa19.8■□□□□ 0.76
Apoe-210ENSMUST00000174710 Ccdc88bQ4QRL3 1481 aa19.76■□□□□ 0.75
Apoe-210ENSMUST00000174710 Disp1Q3TDN0 1521 aa19.76■□□□□ 0.75
Apoe-210ENSMUST00000174710 Col17a1Q07563 1470 aa19.69■□□□□ 0.74
Apoe-210ENSMUST00000174710 Top2aQ01320 1528 aaKnown RBP19.66■□□□□ 0.74
Apoe-210ENSMUST00000174710 Nup160Q9Z0W3 1402 aaKnown RBP19.65■□□□□ 0.74
Apoe-210ENSMUST00000174710 Pbrm1Q8BSQ9 1634 aaKnown RBP19.65■□□□□ 0.74
Apoe-210ENSMUST00000174710 Pabpn1Q8CCS6 302 aaKnown RBP19.64■□□□□ 0.73
Apoe-210ENSMUST00000174710 Rad54l2Q99NG0 1466 aa19.63■□□□□ 0.73
Apoe-210ENSMUST00000174710 Efcab5A0JP43 1406 aa19.62■□□□□ 0.73
Apoe-210ENSMUST00000174710 Magi3Q9EQJ9 1476 aa19.59■□□□□ 0.73
Apoe-210ENSMUST00000174710 Chic1Q8CBW7 227 aa19.58■□□□□ 0.72
Apoe-210ENSMUST00000174710 Pelp1Q9DBD5 1123 aaKnown RBP19.58■□□□□ 0.72
Apoe-210ENSMUST00000174710 PtprkP35822 1457 aa19.55■□□□□ 0.72
Apoe-210ENSMUST00000174710 Cc2d2bA0A286YDU8 1405 aa19.55■□□□□ 0.72
Apoe-210ENSMUST00000174710 Grin2aP35436 1464 aa19.54■□□□□ 0.72
Apoe-210ENSMUST00000174710 NrkQ9R0G8 1455 aa19.54■□□□□ 0.72
Apoe-210ENSMUST00000174710 Shroom4Q1W617 1475 aa19.5■□□□□ 0.71
Apoe-210ENSMUST00000174710 AqrQ8CFQ3 1481 aaKnown RBP19.48■□□□□ 0.71
Apoe-210ENSMUST00000174710 Pla2r1Q62028 1487 aa19.46■□□□□ 0.71
Apoe-210ENSMUST00000174710 SynmQ70IV5 1561 aa19.43■□□□□ 0.7
Apoe-210ENSMUST00000174710 Zcchc11B2RX14 1644 aaKnown RBP19.43■□□□□ 0.7
Apoe-210ENSMUST00000174710 Gpatch8A2A6A1 1505 aa19.42■□□□□ 0.7
Apoe-210ENSMUST00000174710 Fgd6Q69ZL1 1399 aa19.36■□□□□ 0.69
Apoe-210ENSMUST00000174710 Cep170Q6A065 1588 aa19.32■□□□□ 0.68
Apoe-210ENSMUST00000174710 Abca16E9PWJ7 1678 aa19.3■□□□□ 0.68
Apoe-210ENSMUST00000174710 Adgrl3Q80TS3 1537 aa19.29■□□□□ 0.68
Apoe-210ENSMUST00000174710 Gapvd1Q6PAR5 1458 aa19.28■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms