RNA–Protein interactions for RNA: ENSMUST00000167721.7

Actb-207, Transcript of Actin, cytoplasmic 1, mousemouse

TSL 5 BASIC

Gene Actb, Length 1,242 nt, Biotype protein coding, Subcellular localisation Axon, Cell leading edge, Cytoplasm, Cytosol, Dendrite, Endoplasmic reticulum, Exosome, Growth cone, Lamellipodium, Perinuclear, Ribosome, Somatodendritic compartment .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Actb-207ENSMUST00000167721 Chic1Q8CBW7 227 aa23.51■■□□□ 1.35
Actb-207ENSMUST00000167721 Gm35339A0A140LHH9 1649 aa23.15■■□□□ 1.3
Actb-207ENSMUST00000167721 Mapk8ip2Q9ERE9 830 aa22.96■■□□□ 1.27
Actb-207ENSMUST00000167721 NischQ80TM9 1593 aa22.7■■□□□ 1.22
Actb-207ENSMUST00000167721 Abcc8B2RUS7 1588 aa22.03■■□□□ 1.12
Actb-207ENSMUST00000167721 Abcc9P70170 1546 aa21.95■■□□□ 1.1
Actb-207ENSMUST00000167721 ScribQ80U72 1612 aa21.41■■□□□ 1.02
Actb-207ENSMUST00000167721 Phf23Q8BSN5 401 aa21.06■□□□□ 0.96
Actb-207ENSMUST00000167721 NacadQ5SWP3 1504 aa20.71■□□□□ 0.91
Actb-207ENSMUST00000167721 Kdm5dQ62240 1548 aa20.64■□□□□ 0.9
Actb-207ENSMUST00000167721 Sycp2Q9CUU3 1500 aa20.31■□□□□ 0.84
Actb-207ENSMUST00000167721 Plppr3Q7TPB0 716 aa20.28■□□□□ 0.84
Actb-207ENSMUST00000167721 Dcaf1Q80TR8 1506 aa20.21■□□□□ 0.83
Actb-207ENSMUST00000167721 Gab3Q8BSM5 595 aa20.18■□□□□ 0.82
Actb-207ENSMUST00000167721 BicraF8VPZ9 1578 aa20.07■□□□□ 0.8
Actb-207ENSMUST00000167721 Dnajc5bQ9CQ94 199 aa19.89■□□□□ 0.77
Actb-207ENSMUST00000167721 Rb1cc1Q9ESK9 1588 aa19.78■□□□□ 0.76
Actb-207ENSMUST00000167721 Pds5bQ4VA53 1446 aaKnown RBP19.59■□□□□ 0.73
Actb-207ENSMUST00000167721 Thoc2B1AZI6 1594 aaKnown RBP19.53■□□□□ 0.72
Actb-207ENSMUST00000167721 Baz1aO88379 1555 aa19.47■□□□□ 0.71
Actb-207ENSMUST00000167721 Ccdc180J3QNE4 1664 aa19.44■□□□□ 0.7
Actb-207ENSMUST00000167721 Crybg2B7ZCC2 1516 aa19.43■□□□□ 0.7
Actb-207ENSMUST00000167721 Rhox8Q6VSS7 320 aa19.33■□□□□ 0.68
Actb-207ENSMUST00000167721 Atad2bE9Q166 1460 aaKnown RBP19.33■□□□□ 0.68
Actb-207ENSMUST00000167721 Senp3Q9EP97 568 aaKnown RBP19.28■□□□□ 0.68
Actb-207ENSMUST00000167721 Zcchc6Q5BLK4 1491 aaKnown RBP19.23■□□□□ 0.67
Actb-207ENSMUST00000167721 Cc2d2aQ8CFW7 1633 aa19.2■□□□□ 0.66
Actb-207ENSMUST00000167721 Ercc6F8VPZ5 1481 aa19.18■□□□□ 0.66
Actb-207ENSMUST00000167721 Smarca2Q6DIC0 1577 aa19.09■□□□□ 0.65
Actb-207ENSMUST00000167721 Smarca4Q3TKT4 1613 aaKnown RBP19.07■□□□□ 0.64
Actb-207ENSMUST00000167721 Fam135aQ6NS59 1506 aa19.04■□□□□ 0.64
Actb-207ENSMUST00000167721 Iqgap2Q3UQ44 1575 aa19.01■□□□□ 0.63
Actb-207ENSMUST00000167721 Cecr2E9Q2Z1 1453 aa18.9■□□□□ 0.62
Actb-207ENSMUST00000167721 Wdr62Q3U3T8 1523 aa18.89■□□□□ 0.61
Actb-207ENSMUST00000167721 Frmpd1A2AKB4 1549 aa18.84■□□□□ 0.61
Actb-207ENSMUST00000167721 Baz1bQ9Z277 1479 aa18.83■□□□□ 0.6
Actb-207ENSMUST00000167721 Phldb1Q6PDH0 1371 aaKnown RBP18.82■□□□□ 0.6
Actb-207ENSMUST00000167721 Ubl4bQ9CQ84 188 aa18.65■□□□□ 0.58
Actb-207ENSMUST00000167721 Unc13aQ4KUS2 1712 aa18.6■□□□□ 0.57
Actb-207ENSMUST00000167721 Mrc2Q64449 1479 aa18.58■□□□□ 0.57
Actb-207ENSMUST00000167721 Cttnbp2B9EJA2 1648 aa18.45■□□□□ 0.54
Actb-207ENSMUST00000167721 CftrP26361 1476 aa18.44■□□□□ 0.54
Actb-207ENSMUST00000167721 Kcna4Q61423 654 aa18.38■□□□□ 0.53
Actb-207ENSMUST00000167721 Synj1Q8CHC4 1574 aa18.38■□□□□ 0.53
Actb-207ENSMUST00000167721 Rtl1Q7M732 1744 aa18.37■□□□□ 0.53
Actb-207ENSMUST00000167721 Brd4Q9ESU6 1400 aaKnown RBP18.32■□□□□ 0.52
Actb-207ENSMUST00000167721 Dnajc5P60904 198 aa18.31■□□□□ 0.52
Actb-207ENSMUST00000167721 Trim41Q5NCC3 630 aa18.26■□□□□ 0.51
Actb-207ENSMUST00000167721 Lrriq1Q0P5X1 1673 aa18.21■□□□□ 0.51
Actb-207ENSMUST00000167721 Cux2P70298 1426 aa18.14■□□□□ 0.49
Actb-207ENSMUST00000167721 Ccdc136Q3TVA9 1136 aa18.12■□□□□ 0.49
Actb-207ENSMUST00000167721 Rsf1E9PWW9 1441 aaKnown RBP18.12■□□□□ 0.49
Actb-207ENSMUST00000167721 Esf1Q3V1V3 845 aaKnown RBP18.1■□□□□ 0.49
Actb-207ENSMUST00000167721 Kif15Q6P9L6 1387 aa18.09■□□□□ 0.49
Actb-207ENSMUST00000167721 Kif21aQ9QXL2 1672 aa18.09■□□□□ 0.49
Actb-207ENSMUST00000167721 Lamc3Q9R0B6 1581 aa17.98■□□□□ 0.47
Actb-207ENSMUST00000167721 Eif4g3Q80XI3 1579 aaKnown RBP17.96■□□□□ 0.46
Actb-207ENSMUST00000167721 Npm1Q61937 292 aaKnown RBP17.93■□□□□ 0.46
Actb-207ENSMUST00000167721 Shroom2A2ALU4 1481 aa17.88■□□□□ 0.45
Actb-207ENSMUST00000167721 Cep164Q5DU05 1446 aa17.87■□□□□ 0.45
Actb-207ENSMUST00000167721 Urb2E9Q7L1 1524 aaKnown RBP17.77■□□□□ 0.44
Actb-207ENSMUST00000167721 Dhx29Q6PGC1 1365 aaKnown RBP17.74■□□□□ 0.43
Actb-207ENSMUST00000167721 Plb1Q3TTY0 1478 aa17.73■□□□□ 0.43
Actb-207ENSMUST00000167721 Ccdc18Q640L5 1455 aa17.73■□□□□ 0.43
Actb-207ENSMUST00000167721 TnnQ80Z71 1560 aa17.69■□□□□ 0.42
Actb-207ENSMUST00000167721 Crocc2F6XLV1 1638 aa17.68■□□□□ 0.42
Actb-207ENSMUST00000167721 Il27Q8K3I6 234 aa17.67■□□□□ 0.42
Actb-207ENSMUST00000167721 Col17a1Q07563 1470 aa17.67■□□□□ 0.42
Actb-207ENSMUST00000167721 LrpprcQ6PB66 1392 aaKnown RBP17.66■□□□□ 0.42
Actb-207ENSMUST00000167721 Top2bQ64511 1612 aa17.65■□□□□ 0.42
Actb-207ENSMUST00000167721 Camsap1A2AHC3 1581 aa17.63■□□□□ 0.41
Actb-207ENSMUST00000167721 Pabpn1Q8CCS6 302 aaKnown RBP17.63■□□□□ 0.41
Actb-207ENSMUST00000167721 Rusc2Q80U22 1514 aa17.58■□□□□ 0.41
Actb-207ENSMUST00000167721 Ift140E9PY46 1464 aa17.58■□□□□ 0.41
Actb-207ENSMUST00000167721 Golga3P55937 1487 aa17.56■□□□□ 0.4
Actb-207ENSMUST00000167721 PogzQ8BZH4 1409 aaKnown RBP17.54■□□□□ 0.4
Actb-207ENSMUST00000167721 Pelp1Q9DBD5 1123 aaKnown RBP17.51■□□□□ 0.39
Actb-207ENSMUST00000167721 Cngb1E1AZ71 1325 aa17.49■□□□□ 0.39
Actb-207ENSMUST00000167721 Zcchc11B2RX14 1644 aaKnown RBP17.46■□□□□ 0.39
Actb-207ENSMUST00000167721 Duox2A2AQ99 1517 aa17.44■□□□□ 0.38
Actb-207ENSMUST00000167721 Fmn1Q05860 1466 aa17.44■□□□□ 0.38
Actb-207ENSMUST00000167721 Disp1Q3TDN0 1521 aa17.38■□□□□ 0.37
Actb-207ENSMUST00000167721 Pbrm1Q8BSQ9 1634 aaKnown RBP17.36■□□□□ 0.37
Actb-207ENSMUST00000167721 Grin2bQ01097 1482 aa17.35■□□□□ 0.37
Actb-207ENSMUST00000167721 Cc2d2bA0A286YDU8 1405 aa17.33■□□□□ 0.36
Actb-207ENSMUST00000167721 Nup160Q9Z0W3 1402 aaKnown RBP17.33■□□□□ 0.36
Actb-207ENSMUST00000167721 Samd9lQ69Z37 1561 aa17.32■□□□□ 0.36
Actb-207ENSMUST00000167721 Setd1bQ8CFT2 1985 aa17.3■□□□□ 0.36
Actb-207ENSMUST00000167721 Efcab5A0JP43 1406 aa17.24■□□□□ 0.35
Actb-207ENSMUST00000167721 Adgrl3Q80TS3 1537 aa17.22■□□□□ 0.35
Actb-207ENSMUST00000167721 AqrQ8CFQ3 1481 aaKnown RBP17.19■□□□□ 0.34
Actb-207ENSMUST00000167721 Arhgef5E9Q7D5 1581 aa17.19■□□□□ 0.34
Actb-207ENSMUST00000167721 Grin2aP35436 1464 aa17.18■□□□□ 0.34
Actb-207ENSMUST00000167721 PtprkP35822 1457 aa17.18■□□□□ 0.34
Actb-207ENSMUST00000167721 Rad54l2Q99NG0 1466 aa17.18■□□□□ 0.34
Actb-207ENSMUST00000167721 Fgd6Q69ZL1 1399 aa17.18■□□□□ 0.34
Actb-207ENSMUST00000167721 Cep170Q6A065 1588 aa17.17■□□□□ 0.34
Actb-207ENSMUST00000167721 Magi3Q9EQJ9 1476 aa17.16■□□□□ 0.34
Actb-207ENSMUST00000167721 Gapvd1Q6PAR5 1458 aa17.15■□□□□ 0.34
Actb-207ENSMUST00000167721 Ttbk1Q6PCN3 1308 aa17.14■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms