RNA–Protein interactions for RNA: ENSMUST00000165071.1

Traj54-201, mousemouse

BASIC

Gene Traj54, Length 54 nt, Biotype TR J pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traj54-201ENSMUST00000165071 NischQ80TM9 1593 aa16.98■□□□□ 0.31
Traj54-201ENSMUST00000165071 Gm35339A0A140LHH9 1649 aa16.96■□□□□ 0.31
Traj54-201ENSMUST00000165071 Abcc8B2RUS7 1588 aa16.38■□□□□ 0.21
Traj54-201ENSMUST00000165071 Abcc9P70170 1546 aa16.35■□□□□ 0.21
Traj54-201ENSMUST00000165071 ScribQ80U72 1612 aa15.65■□□□□ 0.1
Traj54-201ENSMUST00000165071 NacadQ5SWP3 1504 aa15.4■□□□□ 0.06
Traj54-201ENSMUST00000165071 Kdm5dQ62240 1548 aa15.27■□□□□ 0.03
Traj54-201ENSMUST00000165071 Dcaf1Q80TR8 1506 aa15.09■□□□□ 0.01
Traj54-201ENSMUST00000165071 Sycp2Q9CUU3 1500 aa15.05■□□□□ -0
Traj54-201ENSMUST00000165071 Rhox8Q6VSS7 320 aa15.04■□□□□ -0
Traj54-201ENSMUST00000165071 Rb1cc1Q9ESK9 1588 aa14.77□□□□□ -0.04
Traj54-201ENSMUST00000165071 BicraF8VPZ9 1578 aa14.71□□□□□ -0.05
Traj54-201ENSMUST00000165071 Pds5bQ4VA53 1446 aaKnown RBP14.59□□□□□ -0.07
Traj54-201ENSMUST00000165071 Crybg2B7ZCC2 1516 aa14.58□□□□□ -0.08
Traj54-201ENSMUST00000165071 Baz1aO88379 1555 aa14.58□□□□□ -0.08
Traj54-201ENSMUST00000165071 Zcchc6Q5BLK4 1491 aaKnown RBP14.53□□□□□ -0.08
Traj54-201ENSMUST00000165071 Dnajc5bQ9CQ94 199 aa14.52□□□□□ -0.09
Traj54-201ENSMUST00000165071 Ccdc180J3QNE4 1664 aa14.4□□□□□ -0.1
Traj54-201ENSMUST00000165071 Atad2bE9Q166 1460 aaKnown RBP14.38□□□□□ -0.11
Traj54-201ENSMUST00000165071 Ercc6F8VPZ5 1481 aa14.28□□□□□ -0.12
Traj54-201ENSMUST00000165071 Thoc2B1AZI6 1594 aaKnown RBP14.21□□□□□ -0.14
Traj54-201ENSMUST00000165071 Smarca4Q3TKT4 1613 aaKnown RBP14.16□□□□□ -0.14
Traj54-201ENSMUST00000165071 Smarca2Q6DIC0 1577 aa14.14□□□□□ -0.15
Traj54-201ENSMUST00000165071 Cecr2E9Q2Z1 1453 aa14.12□□□□□ -0.15
Traj54-201ENSMUST00000165071 Iqgap2Q3UQ44 1575 aa14.09□□□□□ -0.15
Traj54-201ENSMUST00000165071 Phldb1Q6PDH0 1371 aaKnown RBP14.07□□□□□ -0.16
Traj54-201ENSMUST00000165071 Cc2d2aQ8CFW7 1633 aa14.06□□□□□ -0.16
Traj54-201ENSMUST00000165071 Ubl4bQ9CQ84 188 aa14.06□□□□□ -0.16
Traj54-201ENSMUST00000165071 Ccdc136Q3TVA9 1136 aa14.02□□□□□ -0.17
Traj54-201ENSMUST00000165071 Frmpd1A2AKB4 1549 aa13.97□□□□□ -0.17
Traj54-201ENSMUST00000165071 Wdr62Q3U3T8 1523 aa13.95□□□□□ -0.18
Traj54-201ENSMUST00000165071 Fam135aQ6NS59 1506 aa13.95□□□□□ -0.18
Traj54-201ENSMUST00000165071 Esf1Q3V1V3 845 aaKnown RBP13.95□□□□□ -0.18
Traj54-201ENSMUST00000165071 Brd4Q9ESU6 1400 aaKnown RBP13.94□□□□□ -0.18
Traj54-201ENSMUST00000165071 Baz1bQ9Z277 1479 aa13.93□□□□□ -0.18
Traj54-201ENSMUST00000165071 Trim41Q5NCC3 630 aa13.87□□□□□ -0.19
Traj54-201ENSMUST00000165071 CftrP26361 1476 aa13.85□□□□□ -0.19
Traj54-201ENSMUST00000165071 Mrc2Q64449 1479 aa13.75□□□□□ -0.21
Traj54-201ENSMUST00000165071 Cttnbp2B9EJA2 1648 aa13.74□□□□□ -0.21
Traj54-201ENSMUST00000165071 Rtl1Q7M732 1744 aa13.73□□□□□ -0.21
Traj54-201ENSMUST00000165071 Synj1Q8CHC4 1574 aa13.73□□□□□ -0.21
Traj54-201ENSMUST00000165071 Rsf1E9PWW9 1441 aaKnown RBP13.67□□□□□ -0.22
Traj54-201ENSMUST00000165071 Npm1Q61937 292 aaKnown RBP13.66□□□□□ -0.22
Traj54-201ENSMUST00000165071 Kif15Q6P9L6 1387 aa13.65□□□□□ -0.22
Traj54-201ENSMUST00000165071 Cux2P70298 1426 aa13.6□□□□□ -0.23
Traj54-201ENSMUST00000165071 Cngb1E1AZ71 1325 aa13.54□□□□□ -0.24
Traj54-201ENSMUST00000165071 Il27Q8K3I6 234 aa13.5□□□□□ -0.25
Traj54-201ENSMUST00000165071 Cep164Q5DU05 1446 aa13.47□□□□□ -0.25
Traj54-201ENSMUST00000165071 Unc13aQ4KUS2 1712 aa13.47□□□□□ -0.25
Traj54-201ENSMUST00000165071 Ccdc18Q640L5 1455 aa13.4□□□□□ -0.26
Traj54-201ENSMUST00000165071 Lamc3Q9R0B6 1581 aa13.38□□□□□ -0.27
Traj54-201ENSMUST00000165071 Golga3P55937 1487 aa13.37□□□□□ -0.27
Traj54-201ENSMUST00000165071 Dhx29Q6PGC1 1365 aaKnown RBP13.32□□□□□ -0.28
Traj54-201ENSMUST00000165071 LrpprcQ6PB66 1392 aaKnown RBP13.31□□□□□ -0.28
Traj54-201ENSMUST00000165071 Dnajc5P60904 198 aa13.3□□□□□ -0.28
Traj54-201ENSMUST00000165071 Lrriq1Q0P5X1 1673 aa13.28□□□□□ -0.28
Traj54-201ENSMUST00000165071 Kif21aQ9QXL2 1672 aa13.25□□□□□ -0.29
Traj54-201ENSMUST00000165071 Urb2E9Q7L1 1524 aaKnown RBP13.24□□□□□ -0.29
Traj54-201ENSMUST00000165071 Fmn1Q05860 1466 aa13.22□□□□□ -0.29
Traj54-201ENSMUST00000165071 Plb1Q3TTY0 1478 aa13.22□□□□□ -0.29
Traj54-201ENSMUST00000165071 Pabpn1Q8CCS6 302 aaKnown RBP13.19□□□□□ -0.3
Traj54-201ENSMUST00000165071 PogzQ8BZH4 1409 aaKnown RBP13.16□□□□□ -0.3
Traj54-201ENSMUST00000165071 Pelp1Q9DBD5 1123 aaKnown RBP13.16□□□□□ -0.3
Traj54-201ENSMUST00000165071 TnnQ80Z71 1560 aa13.15□□□□□ -0.3
Traj54-201ENSMUST00000165071 Top2bQ64511 1612 aa13.14□□□□□ -0.31
Traj54-201ENSMUST00000165071 Ift140E9PY46 1464 aa13.14□□□□□ -0.31
Traj54-201ENSMUST00000165071 Camsap1A2AHC3 1581 aa13.14□□□□□ -0.31
Traj54-201ENSMUST00000165071 Eif4g3Q80XI3 1579 aaKnown RBP13.13□□□□□ -0.31
Traj54-201ENSMUST00000165071 Crocc2F6XLV1 1638 aa13.11□□□□□ -0.31
Traj54-201ENSMUST00000165071 Shroom2A2ALU4 1481 aa13.09□□□□□ -0.31
Traj54-201ENSMUST00000165071 Duox2A2AQ99 1517 aa13.08□□□□□ -0.31
Traj54-201ENSMUST00000165071 Zeb1Q64318 1117 aa13.08□□□□□ -0.32
Traj54-201ENSMUST00000165071 Efcab5A0JP43 1406 aa13.05□□□□□ -0.32
Traj54-201ENSMUST00000165071 Grin2bQ01097 1482 aa13.04□□□□□ -0.32
Traj54-201ENSMUST00000165071 Cc2d2bA0A286YDU8 1405 aa13□□□□□ -0.33
Traj54-201ENSMUST00000165071 Npm2Q80W85 207 aa12.98□□□□□ -0.33
Traj54-201ENSMUST00000165071 Disp1Q3TDN0 1521 aa12.98□□□□□ -0.33
Traj54-201ENSMUST00000165071 Rusc2Q80U22 1514 aa12.97□□□□□ -0.33
Traj54-201ENSMUST00000165071 Chic1Q8CBW7 227 aa12.96□□□□□ -0.33
Traj54-201ENSMUST00000165071 Ccdc88bQ4QRL3 1481 aa12.93□□□□□ -0.34
Traj54-201ENSMUST00000165071 NrkQ9R0G8 1455 aa12.91□□□□□ -0.34
Traj54-201ENSMUST00000165071 Nup160Q9Z0W3 1402 aaKnown RBP12.9□□□□□ -0.34
Traj54-201ENSMUST00000165071 Fgd6Q69ZL1 1399 aa12.9□□□□□ -0.34
Traj54-201ENSMUST00000165071 Col17a1Q07563 1470 aa12.89□□□□□ -0.35
Traj54-201ENSMUST00000165071 Rad54l2Q99NG0 1466 aa12.89□□□□□ -0.35
Traj54-201ENSMUST00000165071 Ttbk1Q6PCN3 1308 aa12.88□□□□□ -0.35
Traj54-201ENSMUST00000165071 Top2aQ01320 1528 aaKnown RBP12.85□□□□□ -0.35
Traj54-201ENSMUST00000165071 Grin2aP35436 1464 aa12.84□□□□□ -0.35
Traj54-201ENSMUST00000165071 Samd9lQ69Z37 1561 aa12.83□□□□□ -0.36
Traj54-201ENSMUST00000165071 Shroom4Q1W617 1475 aa12.83□□□□□ -0.36
Traj54-201ENSMUST00000165071 AqrQ8CFQ3 1481 aaKnown RBP12.83□□□□□ -0.36
Traj54-201ENSMUST00000165071 AknaQ80VW7 1404 aa12.82□□□□□ -0.36
Traj54-201ENSMUST00000165071 Pbrm1Q8BSQ9 1634 aaKnown RBP12.82□□□□□ -0.36
Traj54-201ENSMUST00000165071 Arhgap27A2AB59 869 aa12.82□□□□□ -0.36
Traj54-201ENSMUST00000165071 HrcG5E8J6 738 aa12.79□□□□□ -0.36
Traj54-201ENSMUST00000165071 Gab3Q8BSM5 595 aa12.79□□□□□ -0.36
Traj54-201ENSMUST00000165071 CadpsQ80TJ1 1355 aa12.79□□□□□ -0.36
Traj54-201ENSMUST00000165071 PtprkP35822 1457 aa12.78□□□□□ -0.36
Traj54-201ENSMUST00000165071 Magi3Q9EQJ9 1476 aa12.77□□□□□ -0.37
Traj54-201ENSMUST00000165071 Zcchc11B2RX14 1644 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 81 ms