RNA–Protein interactions for RNA: ENSMUST00000125538.7

2310065F04Rik-201, mousemouse

TSL 1 (best) BASIC

Gene 2310065F04Rik, Length 2,724 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
2310065F04Rik-201ENSMUST00000125538 Gm35339A0A140LHH9 1649 aa21.35■■□□□ 1.01
2310065F04Rik-201ENSMUST00000125538 NischQ80TM9 1593 aa21.29■■□□□ 1
2310065F04Rik-201ENSMUST00000125538 Abcc9P70170 1546 aa20.68■□□□□ 0.9
2310065F04Rik-201ENSMUST00000125538 Abcc8B2RUS7 1588 aa20.4■□□□□ 0.86
2310065F04Rik-201ENSMUST00000125538 ScribQ80U72 1612 aa19.35■□□□□ 0.69
2310065F04Rik-201ENSMUST00000125538 Dcaf1Q80TR8 1506 aa18.95■□□□□ 0.62
2310065F04Rik-201ENSMUST00000125538 Rhox8Q6VSS7 320 aa18.94■□□□□ 0.62
2310065F04Rik-201ENSMUST00000125538 Kdm5dQ62240 1548 aa18.84■□□□□ 0.61
2310065F04Rik-201ENSMUST00000125538 NacadQ5SWP3 1504 aa18.77■□□□□ 0.6
2310065F04Rik-201ENSMUST00000125538 Rb1cc1Q9ESK9 1588 aa18.63■□□□□ 0.57
2310065F04Rik-201ENSMUST00000125538 Ccdc180J3QNE4 1664 aa18.51■□□□□ 0.55
2310065F04Rik-201ENSMUST00000125538 Baz1aO88379 1555 aa18.4■□□□□ 0.54
2310065F04Rik-201ENSMUST00000125538 Sycp2Q9CUU3 1500 aa18.38■□□□□ 0.53
2310065F04Rik-201ENSMUST00000125538 Rtl1Q7M732 1744 aa18.37■□□□□ 0.53
2310065F04Rik-201ENSMUST00000125538 Crybg2B7ZCC2 1516 aa18.19■□□□□ 0.5
2310065F04Rik-201ENSMUST00000125538 BicraF8VPZ9 1578 aa18.05■□□□□ 0.48
2310065F04Rik-201ENSMUST00000125538 Zcchc6Q5BLK4 1491 aaKnown RBP18■□□□□ 0.47
2310065F04Rik-201ENSMUST00000125538 Smarca2Q6DIC0 1577 aa17.93■□□□□ 0.46
2310065F04Rik-201ENSMUST00000125538 Ccdc136Q3TVA9 1136 aa17.62■□□□□ 0.41
2310065F04Rik-201ENSMUST00000125538 Cecr2E9Q2Z1 1453 aa17.6■□□□□ 0.41
2310065F04Rik-201ENSMUST00000125538 Smarca4Q3TKT4 1613 aaKnown RBP17.47■□□□□ 0.39
2310065F04Rik-201ENSMUST00000125538 Brd4Q9ESU6 1400 aaKnown RBP17.41■□□□□ 0.38
2310065F04Rik-201ENSMUST00000125538 Synj1Q8CHC4 1574 aa17.37■□□□□ 0.37
2310065F04Rik-201ENSMUST00000125538 Trim41Q5NCC3 630 aa17.36■□□□□ 0.37
2310065F04Rik-201ENSMUST00000125538 Pds5bQ4VA53 1446 aaKnown RBP17.36■□□□□ 0.37
2310065F04Rik-201ENSMUST00000125538 Atad2bE9Q166 1460 aaKnown RBP17.33■□□□□ 0.36
2310065F04Rik-201ENSMUST00000125538 Cttnbp2B9EJA2 1648 aa17.31■□□□□ 0.36
2310065F04Rik-201ENSMUST00000125538 Iqgap2Q3UQ44 1575 aa17.29■□□□□ 0.36
2310065F04Rik-201ENSMUST00000125538 CftrP26361 1476 aa17.29■□□□□ 0.36
2310065F04Rik-201ENSMUST00000125538 Thoc2B1AZI6 1594 aaKnown RBP17.04■□□□□ 0.32
2310065F04Rik-201ENSMUST00000125538 Wdr62Q3U3T8 1523 aa17.04■□□□□ 0.32
2310065F04Rik-201ENSMUST00000125538 Ercc6F8VPZ5 1481 aa17.04■□□□□ 0.32
2310065F04Rik-201ENSMUST00000125538 Golga3P55937 1487 aa17.04■□□□□ 0.32
2310065F04Rik-201ENSMUST00000125538 Frmpd1A2AKB4 1549 aa17■□□□□ 0.31
2310065F04Rik-201ENSMUST00000125538 Esf1Q3V1V3 845 aaKnown RBP17■□□□□ 0.31
2310065F04Rik-201ENSMUST00000125538 Top2bQ64511 1612 aa17■□□□□ 0.31
2310065F04Rik-201ENSMUST00000125538 HrcG5E8J6 738 aa16.97■□□□□ 0.31
2310065F04Rik-201ENSMUST00000125538 Cngb1E1AZ71 1325 aa16.95■□□□□ 0.3
2310065F04Rik-201ENSMUST00000125538 Unc13aQ4KUS2 1712 aa16.9■□□□□ 0.3
2310065F04Rik-201ENSMUST00000125538 Cc2d2aQ8CFW7 1633 aa16.85■□□□□ 0.29
2310065F04Rik-201ENSMUST00000125538 Fam135aQ6NS59 1506 aa16.77■□□□□ 0.28
2310065F04Rik-201ENSMUST00000125538 Rsf1E9PWW9 1441 aaKnown RBP16.76■□□□□ 0.27
2310065F04Rik-201ENSMUST00000125538 Ccdc88bQ4QRL3 1481 aa16.75■□□□□ 0.27
2310065F04Rik-201ENSMUST00000125538 Cep164Q5DU05 1446 aa16.74■□□□□ 0.27
2310065F04Rik-201ENSMUST00000125538 Phldb1Q6PDH0 1371 aaKnown RBP16.73■□□□□ 0.27
2310065F04Rik-201ENSMUST00000125538 Fmn1Q05860 1466 aa16.72■□□□□ 0.27
2310065F04Rik-201ENSMUST00000125538 TnnQ80Z71 1560 aa16.7■□□□□ 0.26
2310065F04Rik-201ENSMUST00000125538 Lamc3Q9R0B6 1581 aa16.68■□□□□ 0.26
2310065F04Rik-201ENSMUST00000125538 Chic1Q8CBW7 227 aa16.68■□□□□ 0.26
2310065F04Rik-201ENSMUST00000125538 Dnajc5bQ9CQ94 199 aa16.59■□□□□ 0.25
2310065F04Rik-201ENSMUST00000125538 Kif15Q6P9L6 1387 aa16.58■□□□□ 0.24
2310065F04Rik-201ENSMUST00000125538 Top2aQ01320 1528 aaKnown RBP16.56■□□□□ 0.24
2310065F04Rik-201ENSMUST00000125538 Rpgrip1Q9EPQ2 1331 aa16.54■□□□□ 0.24
2310065F04Rik-201ENSMUST00000125538 Ubl4bQ9CQ84 188 aa16.53■□□□□ 0.24
2310065F04Rik-201ENSMUST00000125538 Baz1bQ9Z277 1479 aa16.53■□□□□ 0.24
2310065F04Rik-201ENSMUST00000125538 DiexfQ8BTT6 772 aaKnown RBP16.47■□□□□ 0.23
2310065F04Rik-201ENSMUST00000125538 Camsap1A2AHC3 1581 aa16.46■□□□□ 0.23
2310065F04Rik-201ENSMUST00000125538 Cux2P70298 1426 aa16.43■□□□□ 0.22
2310065F04Rik-201ENSMUST00000125538 Pcgf6Q99NA9 353 aa16.43■□□□□ 0.22
2310065F04Rik-201ENSMUST00000125538 Ccdc18Q640L5 1455 aa16.39■□□□□ 0.21
2310065F04Rik-201ENSMUST00000125538 Gab3Q8BSM5 595 aa16.38■□□□□ 0.21
2310065F04Rik-201ENSMUST00000125538 Mrc2Q64449 1479 aa16.36■□□□□ 0.21
2310065F04Rik-201ENSMUST00000125538 Il27Q8K3I6 234 aa16.31■□□□□ 0.2
2310065F04Rik-201ENSMUST00000125538 Rapgef2Q8CHG7 1496 aa16.3■□□□□ 0.2
2310065F04Rik-201ENSMUST00000125538 Grin2bQ01097 1482 aa16.27■□□□□ 0.2
2310065F04Rik-201ENSMUST00000125538 Npm1Q61937 292 aaKnown RBP16.26■□□□□ 0.19
2310065F04Rik-201ENSMUST00000125538 Kif21aQ9QXL2 1672 aa16.24■□□□□ 0.19
2310065F04Rik-201ENSMUST00000125538 NrkQ9R0G8 1455 aa16.23■□□□□ 0.19
2310065F04Rik-201ENSMUST00000125538 Shroom4Q1W617 1475 aa16.21■□□□□ 0.18
2310065F04Rik-201ENSMUST00000125538 LrpprcQ6PB66 1392 aaKnown RBP16.2■□□□□ 0.18
2310065F04Rik-201ENSMUST00000125538 PtprkP35822 1457 aa16.19■□□□□ 0.18
2310065F04Rik-201ENSMUST00000125538 Myt1Q8CFC2 1127 aa16.19■□□□□ 0.18
2310065F04Rik-201ENSMUST00000125538 Eif4g1Q6NZJ6 1600 aaKnown RBP16.18■□□□□ 0.18
2310065F04Rik-201ENSMUST00000125538 PogzQ8BZH4 1409 aaKnown RBP16.17■□□□□ 0.18
2310065F04Rik-201ENSMUST00000125538 Cep162Q6ZQ06 1403 aa16.15■□□□□ 0.18
2310065F04Rik-201ENSMUST00000125538 Npm2Q80W85 207 aa16.13■□□□□ 0.17
2310065F04Rik-201ENSMUST00000125538 Dhx29Q6PGC1 1365 aaKnown RBP16.13■□□□□ 0.17
2310065F04Rik-201ENSMUST00000125538 Duox2A2AQ99 1517 aa16.12■□□□□ 0.17
2310065F04Rik-201ENSMUST00000125538 Crocc2F6XLV1 1638 aa16.11■□□□□ 0.17
2310065F04Rik-201ENSMUST00000125538 Efcab5A0JP43 1406 aa16.09■□□□□ 0.17
2310065F04Rik-201ENSMUST00000125538 Arhgap35Q91YM2 1499 aa16.07■□□□□ 0.16
2310065F04Rik-201ENSMUST00000125538 Samd9lQ69Z37 1561 aa16.05■□□□□ 0.16
2310065F04Rik-201ENSMUST00000125538 CenpbP27790 599 aa16.03■□□□□ 0.16
2310065F04Rik-201ENSMUST00000125538 Map3k1P53349 1493 aa16.02■□□□□ 0.16
2310065F04Rik-201ENSMUST00000125538 Lrriq1Q0P5X1 1673 aa16.01■□□□□ 0.15
2310065F04Rik-201ENSMUST00000125538 Mroh2bQ7M6Y6 1581 aa16■□□□□ 0.15
2310065F04Rik-201ENSMUST00000125538 Myt1lP97500 1187 aa15.96■□□□□ 0.15
2310065F04Rik-201ENSMUST00000125538 Urb2E9Q7L1 1524 aaKnown RBP15.96■□□□□ 0.15
2310065F04Rik-201ENSMUST00000125538 Plb1Q3TTY0 1478 aa15.96■□□□□ 0.15
2310065F04Rik-201ENSMUST00000125538 SynmQ70IV5 1561 aa15.95■□□□□ 0.14
2310065F04Rik-201ENSMUST00000125538 Bcl11aQ9QYE3 773 aa15.94■□□□□ 0.14
2310065F04Rik-201ENSMUST00000125538 AqrQ8CFQ3 1481 aaKnown RBP15.94■□□□□ 0.14
2310065F04Rik-201ENSMUST00000125538 Zeb1Q64318 1117 aa15.93■□□□□ 0.14
2310065F04Rik-201ENSMUST00000125538 Ehmt2Q9Z148 1263 aaKnown RBP15.89■□□□□ 0.13
2310065F04Rik-201ENSMUST00000125538 Rad54l2Q99NG0 1466 aa15.89■□□□□ 0.13
2310065F04Rik-201ENSMUST00000125538 Amer1Q7TS75 1132 aa15.87■□□□□ 0.13
2310065F04Rik-201ENSMUST00000125538 Clip1Q922J3 1391 aa15.87■□□□□ 0.13
2310065F04Rik-201ENSMUST00000125538 Ift140E9PY46 1464 aa15.86■□□□□ 0.13
2310065F04Rik-201ENSMUST00000125538 Pbrm1Q8BSQ9 1634 aaKnown RBP15.85■□□□□ 0.13
2310065F04Rik-201ENSMUST00000125538 Carmil1Q6EDY6 1374 aa15.84■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms