RNA–Protein interactions for RNA: ENSMUST00000121360.7

Ssbp1-205, Transcript of Single-stranded DNA-binding protein, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp1, Length 1,188 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1-205ENSMUST00000121360 Gm35339A0A140LHH9 1649 aa45.08■■■■■ 4.81
Ssbp1-205ENSMUST00000121360 NischQ80TM9 1593 aa44.28■■■■■ 4.68
Ssbp1-205ENSMUST00000121360 Abcc9P70170 1546 aa43.14■■■■■ 4.5
Ssbp1-205ENSMUST00000121360 Abcc8B2RUS7 1588 aa43.01■■■■■ 4.48
Ssbp1-205ENSMUST00000121360 ScribQ80U72 1612 aa42.01■■■■■ 4.32
Ssbp1-205ENSMUST00000121360 NacadQ5SWP3 1504 aa40.53■■■■■ 4.08
Ssbp1-205ENSMUST00000121360 Kdm5dQ62240 1548 aa40.42■■■■■ 4.06
Ssbp1-205ENSMUST00000121360 Dnajc5bQ9CQ94 199 aa39.81■■■■□ 3.96
Ssbp1-205ENSMUST00000121360 Sycp2Q9CUU3 1500 aa39.8■■■■□ 3.96
Ssbp1-205ENSMUST00000121360 Dcaf1Q80TR8 1506 aa39.5■■■■□ 3.91
Ssbp1-205ENSMUST00000121360 BicraF8VPZ9 1578 aa39.42■■■■□ 3.9
Ssbp1-205ENSMUST00000121360 Rhox8Q6VSS7 320 aa38.82■■■■□ 3.8
Ssbp1-205ENSMUST00000121360 Rb1cc1Q9ESK9 1588 aa38.69■■■■□ 3.78
Ssbp1-205ENSMUST00000121360 Thoc2B1AZI6 1594 aaKnown RBP38.46■■■■□ 3.75
Ssbp1-205ENSMUST00000121360 Pds5bQ4VA53 1446 aaKnown RBP38.46■■■■□ 3.75
Ssbp1-205ENSMUST00000121360 Ccdc180J3QNE4 1664 aa38.45■■■■□ 3.75
Ssbp1-205ENSMUST00000121360 Baz1aO88379 1555 aa38.19■■■■□ 3.7
Ssbp1-205ENSMUST00000121360 Crybg2B7ZCC2 1516 aa37.95■■■■□ 3.67
Ssbp1-205ENSMUST00000121360 Atad2bE9Q166 1460 aaKnown RBP37.92■■■■□ 3.66
Ssbp1-205ENSMUST00000121360 Cc2d2aQ8CFW7 1633 aa37.87■■■■□ 3.65
Ssbp1-205ENSMUST00000121360 Ercc6F8VPZ5 1481 aa37.64■■■■□ 3.62
Ssbp1-205ENSMUST00000121360 Zcchc6Q5BLK4 1491 aaKnown RBP37.56■■■■□ 3.6
Ssbp1-205ENSMUST00000121360 Smarca2Q6DIC0 1577 aa37.41■■■■□ 3.58
Ssbp1-205ENSMUST00000121360 Fam135aQ6NS59 1506 aa37.39■■■■□ 3.58
Ssbp1-205ENSMUST00000121360 Rtl1Q7M732 1744 aa37.39■■■■□ 3.58
Ssbp1-205ENSMUST00000121360 Smarca4Q3TKT4 1613 aaKnown RBP37.27■■■■□ 3.56
Ssbp1-205ENSMUST00000121360 Iqgap2Q3UQ44 1575 aa37.21■■■■□ 3.55
Ssbp1-205ENSMUST00000121360 Cecr2E9Q2Z1 1453 aa37.01■■■■□ 3.52
Ssbp1-205ENSMUST00000121360 Wdr62Q3U3T8 1523 aa37.01■■■■□ 3.52
Ssbp1-205ENSMUST00000121360 Frmpd1A2AKB4 1549 aa37■■■■□ 3.51
Ssbp1-205ENSMUST00000121360 Phldb1Q6PDH0 1371 aaKnown RBP36.99■■■■□ 3.51
Ssbp1-205ENSMUST00000121360 Dnajc5P60904 198 aa36.8■■■■□ 3.48
Ssbp1-205ENSMUST00000121360 Ubl4bQ9CQ84 188 aa36.8■■■■□ 3.48
Ssbp1-205ENSMUST00000121360 Baz1bQ9Z277 1479 aa36.79■■■■□ 3.48
Ssbp1-205ENSMUST00000121360 Mrc2Q64449 1479 aa36.56■■■■□ 3.44
Ssbp1-205ENSMUST00000121360 Trim41Q5NCC3 630 aa36.55■■■■□ 3.44
Ssbp1-205ENSMUST00000121360 Unc13aQ4KUS2 1712 aa36.45■■■■□ 3.43
Ssbp1-205ENSMUST00000121360 Ccdc136Q3TVA9 1136 aa36.18■■■■□ 3.38
Ssbp1-205ENSMUST00000121360 Brd4Q9ESU6 1400 aaKnown RBP36.11■■■■□ 3.37
Ssbp1-205ENSMUST00000121360 Cttnbp2B9EJA2 1648 aa36.02■■■■□ 3.36
Ssbp1-205ENSMUST00000121360 Synj1Q8CHC4 1574 aa36■■■■□ 3.35
Ssbp1-205ENSMUST00000121360 CftrP26361 1476 aa35.97■■■■□ 3.35
Ssbp1-205ENSMUST00000121360 Lrriq1Q0P5X1 1673 aa35.84■■■■□ 3.33
Ssbp1-205ENSMUST00000121360 Rsf1E9PWW9 1441 aaKnown RBP35.67■■■■□ 3.3
Ssbp1-205ENSMUST00000121360 Cux2P70298 1426 aa35.61■■■■□ 3.29
Ssbp1-205ENSMUST00000121360 Kif21aQ9QXL2 1672 aa35.5■■■■□ 3.27
Ssbp1-205ENSMUST00000121360 Kif15Q6P9L6 1387 aa35.45■■■■□ 3.27
Ssbp1-205ENSMUST00000121360 Esf1Q3V1V3 845 aaKnown RBP35.39■■■■□ 3.26
Ssbp1-205ENSMUST00000121360 Shroom2A2ALU4 1481 aa35.34■■■■□ 3.25
Ssbp1-205ENSMUST00000121360 Eif4g3Q80XI3 1579 aaKnown RBP35.28■■■■□ 3.24
Ssbp1-205ENSMUST00000121360 Npm1Q61937 292 aaKnown RBP35.21■■■■□ 3.23
Ssbp1-205ENSMUST00000121360 Golga3P55937 1487 aa35.09■■■■□ 3.21
Ssbp1-205ENSMUST00000121360 Col17a1Q07563 1470 aa35.09■■■■□ 3.21
Ssbp1-205ENSMUST00000121360 Top2bQ64511 1612 aa35.05■■■■□ 3.2
Ssbp1-205ENSMUST00000121360 Lamc3Q9R0B6 1581 aa35.04■■■■□ 3.2
Ssbp1-205ENSMUST00000121360 Cep164Q5DU05 1446 aa34.95■■■■□ 3.19
Ssbp1-205ENSMUST00000121360 Pabpn1Q8CCS6 302 aaKnown RBP34.94■■■■□ 3.18
Ssbp1-205ENSMUST00000121360 Urb2E9Q7L1 1524 aaKnown RBP34.93■■■■□ 3.18
Ssbp1-205ENSMUST00000121360 Plb1Q3TTY0 1478 aa34.85■■■■□ 3.17
Ssbp1-205ENSMUST00000121360 Cngb1E1AZ71 1325 aa34.83■■■■□ 3.17
Ssbp1-205ENSMUST00000121360 Dhx29Q6PGC1 1365 aaKnown RBP34.79■■■■□ 3.16
Ssbp1-205ENSMUST00000121360 Il27Q8K3I6 234 aa34.74■■■■□ 3.15
Ssbp1-205ENSMUST00000121360 Pelp1Q9DBD5 1123 aaKnown RBP34.71■■■■□ 3.15
Ssbp1-205ENSMUST00000121360 TnnQ80Z71 1560 aa34.68■■■■□ 3.14
Ssbp1-205ENSMUST00000121360 Fmn1Q05860 1466 aa34.58■■■■□ 3.13
Ssbp1-205ENSMUST00000121360 Ccdc18Q640L5 1455 aa34.57■■■■□ 3.12
Ssbp1-205ENSMUST00000121360 Crocc2F6XLV1 1638 aa34.56■■■■□ 3.12
Ssbp1-205ENSMUST00000121360 LrpprcQ6PB66 1392 aaKnown RBP34.56■■■■□ 3.12
Ssbp1-205ENSMUST00000121360 Rusc2Q80U22 1514 aa34.48■■■■□ 3.11
Ssbp1-205ENSMUST00000121360 Zcchc11B2RX14 1644 aaKnown RBP34.42■■■■□ 3.1
Ssbp1-205ENSMUST00000121360 Ift140E9PY46 1464 aa34.41■■■■□ 3.1
Ssbp1-205ENSMUST00000121360 Camsap1A2AHC3 1581 aa34.35■■■■□ 3.09
Ssbp1-205ENSMUST00000121360 Ccdc88bQ4QRL3 1481 aa34.28■■■■□ 3.08
Ssbp1-205ENSMUST00000121360 PogzQ8BZH4 1409 aaKnown RBP34.27■■■■□ 3.08
Ssbp1-205ENSMUST00000121360 Pcdh10E9PXQ7 1057 aa34.25■■■■□ 3.07
Ssbp1-205ENSMUST00000121360 HrcG5E8J6 738 aa34.25■■■■□ 3.07
Ssbp1-205ENSMUST00000121360 Duox2A2AQ99 1517 aa34.1■■■■□ 3.05
Ssbp1-205ENSMUST00000121360 Disp1Q3TDN0 1521 aa34.09■■■■□ 3.05
Ssbp1-205ENSMUST00000121360 Top2aQ01320 1528 aaKnown RBP34.08■■■■□ 3.05
Ssbp1-205ENSMUST00000121360 Chic1Q8CBW7 227 aa34.06■■■■□ 3.04
Ssbp1-205ENSMUST00000121360 Adgrl3Q80TS3 1537 aa34.02■■■■□ 3.04
Ssbp1-205ENSMUST00000121360 Arhgef5E9Q7D5 1581 aa34.01■■■■□ 3.03
Ssbp1-205ENSMUST00000121360 Ttbk1Q6PCN3 1308 aa34.01■■■■□ 3.03
Ssbp1-205ENSMUST00000121360 Setd1bQ8CFT2 1985 aa33.92■■■■□ 3.02
Ssbp1-205ENSMUST00000121360 Cc2d2bA0A286YDU8 1405 aa33.92■■■■□ 3.02
Ssbp1-205ENSMUST00000121360 Nup160Q9Z0W3 1402 aaKnown RBP33.92■■■■□ 3.02
Ssbp1-205ENSMUST00000121360 PtprkP35822 1457 aa33.89■■■■□ 3.02
Ssbp1-205ENSMUST00000121360 Gm156Q58A37 223 aa33.85■■■■□ 3.01
Ssbp1-205ENSMUST00000121360 Grin2bQ01097 1482 aa33.84■■■■□ 3.01
Ssbp1-205ENSMUST00000121360 Samd9lQ69Z37 1561 aa33.82■■■■□ 3
Ssbp1-205ENSMUST00000121360 Cep170Q6A065 1588 aa33.82■■■■□ 3
Ssbp1-205ENSMUST00000121360 Pbrm1Q8BSQ9 1634 aaKnown RBP33.81■■■■□ 3
Ssbp1-205ENSMUST00000121360 Gapvd1Q6PAR5 1458 aa33.78■■■■□ 3
Ssbp1-205ENSMUST00000121360 PtprtQ99M80 1454 aa33.75■■■□□ 2.99
Ssbp1-205ENSMUST00000121360 Fgd6Q69ZL1 1399 aa33.73■■■□□ 2.99
Ssbp1-205ENSMUST00000121360 Rad54l2Q99NG0 1466 aa33.69■■■□□ 2.98
Ssbp1-205ENSMUST00000121360 NrkQ9R0G8 1455 aa33.68■■■□□ 2.98
Ssbp1-205ENSMUST00000121360 AqrQ8CFQ3 1481 aaKnown RBP33.64■■■□□ 2.98
Ssbp1-205ENSMUST00000121360 Efcab5A0JP43 1406 aa33.62■■■□□ 2.97
Ssbp1-205ENSMUST00000121360 Grin2aP35436 1464 aa33.6■■■□□ 2.97
Retrieved 100 of 22,080 RNA–protein pairs in 10.3 ms