RNA–Protein interactions for RNA: ENSMUST00000114989.8

Cnot4-202, Transcript of CCR4-NOT transcription complex subunit 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Cnot4, Length 3,279 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot4-202ENSMUST00000114989 Gm35339A0A140LHH9 1649 aa13.35□□□□□ -0.27
Cnot4-202ENSMUST00000114989 NischQ80TM9 1593 aa12.01□□□□□ -0.49
Cnot4-202ENSMUST00000114989 Abcc9P70170 1546 aa11.95□□□□□ -0.5
Cnot4-202ENSMUST00000114989 Abcc8B2RUS7 1588 aa11.94□□□□□ -0.5
Cnot4-202ENSMUST00000114989 ScribQ80U72 1612 aa11.75□□□□□ -0.53
Cnot4-202ENSMUST00000114989 Dcaf1Q80TR8 1506 aa11.42□□□□□ -0.58
Cnot4-202ENSMUST00000114989 Ccdc180J3QNE4 1664 aa11.39□□□□□ -0.59
Cnot4-202ENSMUST00000114989 Chic1Q8CBW7 227 aa11.22□□□□□ -0.61
Cnot4-202ENSMUST00000114989 NacadQ5SWP3 1504 aa11.21□□□□□ -0.62
Cnot4-202ENSMUST00000114989 Kdm5dQ62240 1548 aa11.06□□□□□ -0.64
Cnot4-202ENSMUST00000114989 Baz1bQ9Z277 1479 aa11.05□□□□□ -0.64
Cnot4-202ENSMUST00000114989 Sycp2Q9CUU3 1500 aa11.05□□□□□ -0.64
Cnot4-202ENSMUST00000114989 BicraF8VPZ9 1578 aa10.95□□□□□ -0.66
Cnot4-202ENSMUST00000114989 Thoc2B1AZI6 1594 aaKnown RBP10.93□□□□□ -0.66
Cnot4-202ENSMUST00000114989 Crybg2B7ZCC2 1516 aa10.92□□□□□ -0.66
Cnot4-202ENSMUST00000114989 Smarca2Q6DIC0 1577 aa10.6□□□□□ -0.71
Cnot4-202ENSMUST00000114989 Fam135aQ6NS59 1506 aa10.59□□□□□ -0.71
Cnot4-202ENSMUST00000114989 Pds5bQ4VA53 1446 aaKnown RBP10.48□□□□□ -0.73
Cnot4-202ENSMUST00000114989 Baz1aO88379 1555 aa10.46□□□□□ -0.73
Cnot4-202ENSMUST00000114989 Rb1cc1Q9ESK9 1588 aa10.43□□□□□ -0.74
Cnot4-202ENSMUST00000114989 Atad2bE9Q166 1460 aaKnown RBP10.38□□□□□ -0.75
Cnot4-202ENSMUST00000114989 Unc13aQ4KUS2 1712 aa10.35□□□□□ -0.75
Cnot4-202ENSMUST00000114989 Mapk8ip2Q9ERE9 830 aa10.33□□□□□ -0.76
Cnot4-202ENSMUST00000114989 Smarca4Q3TKT4 1613 aaKnown RBP10.29□□□□□ -0.76
Cnot4-202ENSMUST00000114989 Wdr62Q3U3T8 1523 aa10.27□□□□□ -0.77
Cnot4-202ENSMUST00000114989 Cc2d2aQ8CFW7 1633 aa10.25□□□□□ -0.77
Cnot4-202ENSMUST00000114989 Iqgap2Q3UQ44 1575 aa10.17□□□□□ -0.78
Cnot4-202ENSMUST00000114989 Gpatch8A2A6A1 1505 aa10.15□□□□□ -0.79
Cnot4-202ENSMUST00000114989 Plppr3Q7TPB0 716 aa10.15□□□□□ -0.79
Cnot4-202ENSMUST00000114989 Phf23Q8BSN5 401 aa10.15□□□□□ -0.79
Cnot4-202ENSMUST00000114989 Ercc6F8VPZ5 1481 aa10.06□□□□□ -0.8
Cnot4-202ENSMUST00000114989 Frmpd1A2AKB4 1549 aa10.03□□□□□ -0.8
Cnot4-202ENSMUST00000114989 Rtl1Q7M732 1744 aa10.01□□□□□ -0.81
Cnot4-202ENSMUST00000114989 Cttnbp2B9EJA2 1648 aa10□□□□□ -0.81
Cnot4-202ENSMUST00000114989 Dnajc5bQ9CQ94 199 aa9.93□□□□□ -0.82
Cnot4-202ENSMUST00000114989 Eif4g3Q80XI3 1579 aaKnown RBP9.93□□□□□ -0.82
Cnot4-202ENSMUST00000114989 Phldb1Q6PDH0 1371 aaKnown RBP9.9□□□□□ -0.82
Cnot4-202ENSMUST00000114989 Shroom2A2ALU4 1481 aa9.9□□□□□ -0.83
Cnot4-202ENSMUST00000114989 Rhox8Q6VSS7 320 aa9.87□□□□□ -0.83
Cnot4-202ENSMUST00000114989 Mrc2Q64449 1479 aa9.86□□□□□ -0.83
Cnot4-202ENSMUST00000114989 Lrriq1Q0P5X1 1673 aa9.84□□□□□ -0.83
Cnot4-202ENSMUST00000114989 TnnQ80Z71 1560 aa9.83□□□□□ -0.84
Cnot4-202ENSMUST00000114989 Gab3Q8BSM5 595 aa9.81□□□□□ -0.84
Cnot4-202ENSMUST00000114989 Zcchc11B2RX14 1644 aaKnown RBP9.8□□□□□ -0.84
Cnot4-202ENSMUST00000114989 Lamc3Q9R0B6 1581 aa9.8□□□□□ -0.84
Cnot4-202ENSMUST00000114989 Pbrm1Q8BSQ9 1634 aaKnown RBP9.76□□□□□ -0.85
Cnot4-202ENSMUST00000114989 Cecr2E9Q2Z1 1453 aa9.73□□□□□ -0.85
Cnot4-202ENSMUST00000114989 Rsf1E9PWW9 1441 aaKnown RBP9.7□□□□□ -0.86
Cnot4-202ENSMUST00000114989 CftrP26361 1476 aa9.68□□□□□ -0.86
Cnot4-202ENSMUST00000114989 Kif21aQ9QXL2 1672 aa9.67□□□□□ -0.86
Cnot4-202ENSMUST00000114989 Kcna4Q61423 654 aa9.64□□□□□ -0.87
Cnot4-202ENSMUST00000114989 Synj1Q8CHC4 1574 aa9.63□□□□□ -0.87
Cnot4-202ENSMUST00000114989 Dnajc5P60904 198 aa9.6□□□□□ -0.87
Cnot4-202ENSMUST00000114989 Top2bQ64511 1612 aa9.6□□□□□ -0.87
Cnot4-202ENSMUST00000114989 Col17a1Q07563 1470 aa9.55□□□□□ -0.88
Cnot4-202ENSMUST00000114989 Rusc2Q80U22 1514 aa9.51□□□□□ -0.89
Cnot4-202ENSMUST00000114989 Senp3Q9EP97 568 aaKnown RBP9.5□□□□□ -0.89
Cnot4-202ENSMUST00000114989 Setd1bQ8CFT2 1985 aa9.49□□□□□ -0.89
Cnot4-202ENSMUST00000114989 Zcchc6Q5BLK4 1491 aaKnown RBP9.47□□□□□ -0.89
Cnot4-202ENSMUST00000114989 Brd4Q9ESU6 1400 aaKnown RBP9.47□□□□□ -0.89
Cnot4-202ENSMUST00000114989 Camsap1A2AHC3 1581 aa9.39□□□□□ -0.91
Cnot4-202ENSMUST00000114989 Crocc2F6XLV1 1638 aa9.37□□□□□ -0.91
Cnot4-202ENSMUST00000114989 Ift140E9PY46 1464 aa9.36□□□□□ -0.91
Cnot4-202ENSMUST00000114989 Urb2E9Q7L1 1524 aaKnown RBP9.35□□□□□ -0.91
Cnot4-202ENSMUST00000114989 Nup160Q9Z0W3 1402 aaKnown RBP9.31□□□□□ -0.92
Cnot4-202ENSMUST00000114989 Arhgef5E9Q7D5 1581 aa9.28□□□□□ -0.92
Cnot4-202ENSMUST00000114989 Chd1P40201 1711 aa9.25□□□□□ -0.93
Cnot4-202ENSMUST00000114989 Adamts12Q811B3 1600 aa9.25□□□□□ -0.93
Cnot4-202ENSMUST00000114989 Arhgef12Q8R4H2 1543 aaKnown RBP9.24□□□□□ -0.93
Cnot4-202ENSMUST00000114989 Setbp1Q9Z180 1582 aa9.24□□□□□ -0.93
Cnot4-202ENSMUST00000114989 Golga3P55937 1487 aa9.24□□□□□ -0.93
Cnot4-202ENSMUST00000114989 EprsQ8CGC7 1512 aaKnown RBP9.22□□□□□ -0.93
Cnot4-202ENSMUST00000114989 Cux2P70298 1426 aa9.22□□□□□ -0.93
Cnot4-202ENSMUST00000114989 Pprc1Q6NZN1 1644 aa9.21□□□□□ -0.93
Cnot4-202ENSMUST00000114989 Kiaa1210E9Q0C6 1637 aa9.2□□□□□ -0.94
Cnot4-202ENSMUST00000114989 Map3k4O08648 1597 aa9.19□□□□□ -0.94
Cnot4-202ENSMUST00000114989 PogzQ8BZH4 1409 aaKnown RBP9.19□□□□□ -0.94
Cnot4-202ENSMUST00000114989 Dnmt1P13864 1620 aaKnown RBP9.19□□□□□ -0.94
Cnot4-202ENSMUST00000114989 Plb1Q3TTY0 1478 aa9.17□□□□□ -0.94
Cnot4-202ENSMUST00000114989 Cc2d2bA0A286YDU8 1405 aa9.16□□□□□ -0.94
Cnot4-202ENSMUST00000114989 Cep164Q5DU05 1446 aa9.16□□□□□ -0.94
Cnot4-202ENSMUST00000114989 AqrQ8CFQ3 1481 aaKnown RBP9.16□□□□□ -0.94
Cnot4-202ENSMUST00000114989 Ccdc136Q3TVA9 1136 aa9.16□□□□□ -0.94
Cnot4-202ENSMUST00000114989 Disp1Q3TDN0 1521 aa9.14□□□□□ -0.95
Cnot4-202ENSMUST00000114989 AdgbG3UZ78 1657 aa9.14□□□□□ -0.95
Cnot4-202ENSMUST00000114989 Fmn1Q05860 1466 aa9.14□□□□□ -0.95
Cnot4-202ENSMUST00000114989 Kiaa0556Q8C753 1610 aa9.13□□□□□ -0.95
Cnot4-202ENSMUST00000114989 Cep170Q6A065 1588 aa9.12□□□□□ -0.95
Cnot4-202ENSMUST00000114989 Rpgrip1Q9EPQ2 1331 aa9.12□□□□□ -0.95
Cnot4-202ENSMUST00000114989 Samd9lQ69Z37 1561 aa9.12□□□□□ -0.95
Cnot4-202ENSMUST00000114989 Grin2bQ01097 1482 aa9.12□□□□□ -0.95
Cnot4-202ENSMUST00000114989 NrkQ9R0G8 1455 aa9.11□□□□□ -0.95
Cnot4-202ENSMUST00000114989 Ubl4bQ9CQ84 188 aa9.11□□□□□ -0.95
Cnot4-202ENSMUST00000114989 Arhgef11Q68FM7 1552 aa9.1□□□□□ -0.95
Cnot4-202ENSMUST00000114989 Magi3Q9EQJ9 1476 aa9.1□□□□□ -0.95
Cnot4-202ENSMUST00000114989 Neo1P97798 1493 aa9.09□□□□□ -0.95
Cnot4-202ENSMUST00000114989 Ccdc18Q640L5 1455 aa9.09□□□□□ -0.95
Cnot4-202ENSMUST00000114989 Clasp1Q80TV8 1535 aaKnown RBP9.08□□□□□ -0.96
Cnot4-202ENSMUST00000114989 Abca16E9PWJ7 1678 aa9.08□□□□□ -0.96
Cnot4-202ENSMUST00000114989 Efcab5A0JP43 1406 aa9.07□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 71.8 ms