RNA–Protein interactions for RNA: ENSMUST00000114425.2

Hoxa9-202, Transcript of Homeobox protein Hox-A9, mousemouse

TSL 2 BASIC

Gene Hoxa9, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9-202ENSMUST00000114425 Gm35339A0A140LHH9 1649 aa46.69■■■■■ 5.07
Hoxa9-202ENSMUST00000114425 NischQ80TM9 1593 aa46.01■■■■■ 4.96
Hoxa9-202ENSMUST00000114425 Abcc9P70170 1546 aa44.55■■■■■ 4.72
Hoxa9-202ENSMUST00000114425 Abcc8B2RUS7 1588 aa44.41■■■■■ 4.7
Hoxa9-202ENSMUST00000114425 ScribQ80U72 1612 aa42.82■■■■■ 4.45
Hoxa9-202ENSMUST00000114425 NacadQ5SWP3 1504 aa41.48■■■■■ 4.23
Hoxa9-202ENSMUST00000114425 Kdm5dQ62240 1548 aa41.42■■■■■ 4.22
Hoxa9-202ENSMUST00000114425 Dcaf1Q80TR8 1506 aa40.93■■■■■ 4.14
Hoxa9-202ENSMUST00000114425 Sycp2Q9CUU3 1500 aa40.64■■■■■ 4.1
Hoxa9-202ENSMUST00000114425 Rb1cc1Q9ESK9 1588 aa40.17■■■■■ 4.02
Hoxa9-202ENSMUST00000114425 BicraF8VPZ9 1578 aa40.05■■■■■ 4
Hoxa9-202ENSMUST00000114425 Rhox8Q6VSS7 320 aa39.74■■■■□ 3.95
Hoxa9-202ENSMUST00000114425 Ccdc180J3QNE4 1664 aa39.72■■■■□ 3.95
Hoxa9-202ENSMUST00000114425 Baz1aO88379 1555 aa39.58■■■■□ 3.93
Hoxa9-202ENSMUST00000114425 Crybg2B7ZCC2 1516 aa39.35■■■■□ 3.89
Hoxa9-202ENSMUST00000114425 Zcchc6Q5BLK4 1491 aaKnown RBP38.94■■■■□ 3.82
Hoxa9-202ENSMUST00000114425 Pds5bQ4VA53 1446 aaKnown RBP38.94■■■■□ 3.82
Hoxa9-202ENSMUST00000114425 Thoc2B1AZI6 1594 aaKnown RBP38.64■■■■□ 3.78
Hoxa9-202ENSMUST00000114425 Dnajc5bQ9CQ94 199 aa38.61■■■■□ 3.77
Hoxa9-202ENSMUST00000114425 Atad2bE9Q166 1460 aaKnown RBP38.57■■■■□ 3.76
Hoxa9-202ENSMUST00000114425 Smarca2Q6DIC0 1577 aa38.42■■■■□ 3.74
Hoxa9-202ENSMUST00000114425 Smarca4Q3TKT4 1613 aaKnown RBP38.38■■■■□ 3.73
Hoxa9-202ENSMUST00000114425 Ercc6F8VPZ5 1481 aa38.21■■■■□ 3.71
Hoxa9-202ENSMUST00000114425 Rtl1Q7M732 1744 aa38.17■■■■□ 3.7
Hoxa9-202ENSMUST00000114425 Iqgap2Q3UQ44 1575 aa38.15■■■■□ 3.7
Hoxa9-202ENSMUST00000114425 Cecr2E9Q2Z1 1453 aa38.13■■■■□ 3.69
Hoxa9-202ENSMUST00000114425 Cc2d2aQ8CFW7 1633 aa38.01■■■■□ 3.68
Hoxa9-202ENSMUST00000114425 Wdr62Q3U3T8 1523 aa37.77■■■■□ 3.64
Hoxa9-202ENSMUST00000114425 Fam135aQ6NS59 1506 aa37.77■■■■□ 3.64
Hoxa9-202ENSMUST00000114425 Frmpd1A2AKB4 1549 aa37.66■■■■□ 3.62
Hoxa9-202ENSMUST00000114425 Cttnbp2B9EJA2 1648 aa37.46■■■■□ 3.59
Hoxa9-202ENSMUST00000114425 Phldb1Q6PDH0 1371 aaKnown RBP37.43■■■■□ 3.58
Hoxa9-202ENSMUST00000114425 Baz1bQ9Z277 1479 aa37.39■■■■□ 3.58
Hoxa9-202ENSMUST00000114425 Unc13aQ4KUS2 1712 aa37.35■■■■□ 3.57
Hoxa9-202ENSMUST00000114425 CftrP26361 1476 aa37.33■■■■□ 3.57
Hoxa9-202ENSMUST00000114425 Synj1Q8CHC4 1574 aa37.33■■■■□ 3.57
Hoxa9-202ENSMUST00000114425 Brd4Q9ESU6 1400 aaKnown RBP37.32■■■■□ 3.56
Hoxa9-202ENSMUST00000114425 Ccdc136Q3TVA9 1136 aa37.12■■■■□ 3.53
Hoxa9-202ENSMUST00000114425 Ubl4bQ9CQ84 188 aa37.03■■■■□ 3.52
Hoxa9-202ENSMUST00000114425 Mrc2Q64449 1479 aa36.87■■■■□ 3.49
Hoxa9-202ENSMUST00000114425 Esf1Q3V1V3 845 aaKnown RBP36.68■■■■□ 3.46
Hoxa9-202ENSMUST00000114425 Trim41Q5NCC3 630 aa36.62■■■■□ 3.45
Hoxa9-202ENSMUST00000114425 Rsf1E9PWW9 1441 aaKnown RBP36.46■■■■□ 3.43
Hoxa9-202ENSMUST00000114425 Kif15Q6P9L6 1387 aa36.36■■■■□ 3.41
Hoxa9-202ENSMUST00000114425 Cux2P70298 1426 aa36.3■■■■□ 3.4
Hoxa9-202ENSMUST00000114425 Lamc3Q9R0B6 1581 aa36.3■■■■□ 3.4
Hoxa9-202ENSMUST00000114425 Lrriq1Q0P5X1 1673 aa36.14■■■■□ 3.38
Hoxa9-202ENSMUST00000114425 Kif21aQ9QXL2 1672 aa36.13■■■■□ 3.37
Hoxa9-202ENSMUST00000114425 Top2bQ64511 1612 aa36.05■■■■□ 3.36
Hoxa9-202ENSMUST00000114425 Golga3P55937 1487 aa36.01■■■■□ 3.36
Hoxa9-202ENSMUST00000114425 TnnQ80Z71 1560 aa35.95■■■■□ 3.35
Hoxa9-202ENSMUST00000114425 Npm1Q61937 292 aaKnown RBP35.91■■■■□ 3.34
Hoxa9-202ENSMUST00000114425 Cep164Q5DU05 1446 aa35.87■■■■□ 3.33
Hoxa9-202ENSMUST00000114425 Cngb1E1AZ71 1325 aa35.83■■■■□ 3.33
Hoxa9-202ENSMUST00000114425 Ccdc18Q640L5 1455 aa35.79■■■■□ 3.32
Hoxa9-202ENSMUST00000114425 Camsap1A2AHC3 1581 aa35.68■■■■□ 3.3
Hoxa9-202ENSMUST00000114425 Eif4g3Q80XI3 1579 aaKnown RBP35.64■■■■□ 3.3
Hoxa9-202ENSMUST00000114425 Fmn1Q05860 1466 aa35.63■■■■□ 3.29
Hoxa9-202ENSMUST00000114425 Il27Q8K3I6 234 aa35.57■■■■□ 3.28
Hoxa9-202ENSMUST00000114425 Dhx29Q6PGC1 1365 aaKnown RBP35.54■■■■□ 3.28
Hoxa9-202ENSMUST00000114425 Crocc2F6XLV1 1638 aa35.51■■■■□ 3.28
Hoxa9-202ENSMUST00000114425 LrpprcQ6PB66 1392 aaKnown RBP35.49■■■■□ 3.27
Hoxa9-202ENSMUST00000114425 Urb2E9Q7L1 1524 aaKnown RBP35.47■■■■□ 3.27
Hoxa9-202ENSMUST00000114425 Plb1Q3TTY0 1478 aa35.4■■■■□ 3.26
Hoxa9-202ENSMUST00000114425 PogzQ8BZH4 1409 aaKnown RBP35.31■■■■□ 3.24
Hoxa9-202ENSMUST00000114425 Ift140E9PY46 1464 aa35.17■■■■□ 3.22
Hoxa9-202ENSMUST00000114425 Duox2A2AQ99 1517 aa35.14■■■■□ 3.22
Hoxa9-202ENSMUST00000114425 Grin2bQ01097 1482 aa35.14■■■■□ 3.22
Hoxa9-202ENSMUST00000114425 Rusc2Q80U22 1514 aa35.06■■■■□ 3.2
Hoxa9-202ENSMUST00000114425 Shroom2A2ALU4 1481 aa35.05■■■■□ 3.2
Hoxa9-202ENSMUST00000114425 Ccdc88bQ4QRL3 1481 aa34.99■■■■□ 3.19
Hoxa9-202ENSMUST00000114425 Top2aQ01320 1528 aaKnown RBP34.96■■■■□ 3.19
Hoxa9-202ENSMUST00000114425 Pbrm1Q8BSQ9 1634 aaKnown RBP34.95■■■■□ 3.19
Hoxa9-202ENSMUST00000114425 Dnajc5P60904 198 aa34.95■■■■□ 3.19
Hoxa9-202ENSMUST00000114425 Samd9lQ69Z37 1561 aa34.94■■■■□ 3.18
Hoxa9-202ENSMUST00000114425 Setd1bQ8CFT2 1985 aa34.88■■■■□ 3.17
Hoxa9-202ENSMUST00000114425 Efcab5A0JP43 1406 aa34.88■■■■□ 3.17
Hoxa9-202ENSMUST00000114425 Disp1Q3TDN0 1521 aa34.85■■■■□ 3.17
Hoxa9-202ENSMUST00000114425 NrkQ9R0G8 1455 aa34.78■■■■□ 3.16
Hoxa9-202ENSMUST00000114425 Nup160Q9Z0W3 1402 aaKnown RBP34.72■■■■□ 3.15
Hoxa9-202ENSMUST00000114425 Cc2d2bA0A286YDU8 1405 aa34.69■■■■□ 3.14
Hoxa9-202ENSMUST00000114425 Chic1Q8CBW7 227 aa34.66■■■■□ 3.14
Hoxa9-202ENSMUST00000114425 Pabpn1Q8CCS6 302 aaKnown RBP34.65■■■■□ 3.14
Hoxa9-202ENSMUST00000114425 Shroom4Q1W617 1475 aa34.65■■■■□ 3.14
Hoxa9-202ENSMUST00000114425 Rad54l2Q99NG0 1466 aa34.61■■■■□ 3.13
Hoxa9-202ENSMUST00000114425 Grin2aP35436 1464 aa34.58■■■■□ 3.13
Hoxa9-202ENSMUST00000114425 Magi3Q9EQJ9 1476 aa34.56■■■■□ 3.12
Hoxa9-202ENSMUST00000114425 PtprkP35822 1457 aa34.51■■■■□ 3.11
Hoxa9-202ENSMUST00000114425 Pelp1Q9DBD5 1123 aaKnown RBP34.49■■■■□ 3.11
Hoxa9-202ENSMUST00000114425 AqrQ8CFQ3 1481 aaKnown RBP34.49■■■■□ 3.11
Hoxa9-202ENSMUST00000114425 Col17a1Q07563 1470 aa34.48■■■■□ 3.11
Hoxa9-202ENSMUST00000114425 SynmQ70IV5 1561 aa34.48■■■■□ 3.11
Hoxa9-202ENSMUST00000114425 Gpatch8A2A6A1 1505 aa34.45■■■■□ 3.11
Hoxa9-202ENSMUST00000114425 Pla2r1Q62028 1487 aa34.37■■■■□ 3.09
Hoxa9-202ENSMUST00000114425 Zcchc11B2RX14 1644 aaKnown RBP34.33■■■■□ 3.09
Hoxa9-202ENSMUST00000114425 Zeb1Q64318 1117 aa34.31■■■■□ 3.08
Hoxa9-202ENSMUST00000114425 Fgd6Q69ZL1 1399 aa34.29■■■■□ 3.08
Hoxa9-202ENSMUST00000114425 Npm2Q80W85 207 aa34.18■■■■□ 3.06
Hoxa9-202ENSMUST00000114425 Mroh2bQ7M6Y6 1581 aa34.15■■■■□ 3.06
Hoxa9-202ENSMUST00000114425 TchhA0A0B4J1F9 1599 aa34.11■■■■□ 3.05
Retrieved 100 of 22,080 RNA–protein pairs in 69.6 ms