RNA–Protein interactions for RNA: ENSMUST00000114425.2

Hoxa9-202, Transcript of Homeobox protein Hox-A9, mousemouse

TSL 2 BASIC

Gene Hoxa9, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9-202ENSMUST00000114425 Gm35339A0A140LHH9 1649 aa46,69■■■■■ 5,07
Hoxa9-202ENSMUST00000114425 NischQ80TM9 1593 aa46,01■■■■■ 4,96
Hoxa9-202ENSMUST00000114425 Abcc9P70170 1546 aa44,55■■■■■ 4,72
Hoxa9-202ENSMUST00000114425 Abcc8B2RUS7 1588 aa44,41■■■■■ 4,7
Hoxa9-202ENSMUST00000114425 ScribQ80U72 1612 aa42,82■■■■■ 4,45
Hoxa9-202ENSMUST00000114425 NacadQ5SWP3 1504 aa41,48■■■■■ 4,23
Hoxa9-202ENSMUST00000114425 Kdm5dQ62240 1548 aa41,42■■■■■ 4,22
Hoxa9-202ENSMUST00000114425 Dcaf1Q80TR8 1506 aa40,93■■■■■ 4,14
Hoxa9-202ENSMUST00000114425 Sycp2Q9CUU3 1500 aa40,64■■■■■ 4,1
Hoxa9-202ENSMUST00000114425 Rb1cc1Q9ESK9 1588 aa40,17■■■■■ 4,02
Hoxa9-202ENSMUST00000114425 BicraF8VPZ9 1578 aa40,05■■■■■ 4
Hoxa9-202ENSMUST00000114425 Rhox8Q6VSS7 320 aa39,74■■■■□ 3,95
Hoxa9-202ENSMUST00000114425 Ccdc180J3QNE4 1664 aa39,72■■■■□ 3,95
Hoxa9-202ENSMUST00000114425 Baz1aO88379 1555 aa39,58■■■■□ 3,93
Hoxa9-202ENSMUST00000114425 Crybg2B7ZCC2 1516 aa39,35■■■■□ 3,89
Hoxa9-202ENSMUST00000114425 Zcchc6Q5BLK4 1491 aaKnown RBP38,94■■■■□ 3,82
Hoxa9-202ENSMUST00000114425 Pds5bQ4VA53 1446 aaKnown RBP38,94■■■■□ 3,82
Hoxa9-202ENSMUST00000114425 Thoc2B1AZI6 1594 aaKnown RBP38,64■■■■□ 3,78
Hoxa9-202ENSMUST00000114425 Dnajc5bQ9CQ94 199 aa38,61■■■■□ 3,77
Hoxa9-202ENSMUST00000114425 Atad2bE9Q166 1460 aaKnown RBP38,57■■■■□ 3,76
Hoxa9-202ENSMUST00000114425 Smarca2Q6DIC0 1577 aa38,42■■■■□ 3,74
Hoxa9-202ENSMUST00000114425 Smarca4Q3TKT4 1613 aaKnown RBP38,38■■■■□ 3,73
Hoxa9-202ENSMUST00000114425 Ercc6F8VPZ5 1481 aa38,21■■■■□ 3,71
Hoxa9-202ENSMUST00000114425 Rtl1Q7M732 1744 aa38,17■■■■□ 3,7
Hoxa9-202ENSMUST00000114425 Iqgap2Q3UQ44 1575 aa38,15■■■■□ 3,7
Hoxa9-202ENSMUST00000114425 Cecr2E9Q2Z1 1453 aa38,13■■■■□ 3,69
Hoxa9-202ENSMUST00000114425 Cc2d2aQ8CFW7 1633 aa38,01■■■■□ 3,68
Hoxa9-202ENSMUST00000114425 Wdr62Q3U3T8 1523 aa37,77■■■■□ 3,64
Hoxa9-202ENSMUST00000114425 Fam135aQ6NS59 1506 aa37,77■■■■□ 3,64
Hoxa9-202ENSMUST00000114425 Frmpd1A2AKB4 1549 aa37,66■■■■□ 3,62
Hoxa9-202ENSMUST00000114425 Cttnbp2B9EJA2 1648 aa37,46■■■■□ 3,59
Hoxa9-202ENSMUST00000114425 Phldb1Q6PDH0 1371 aaKnown RBP37,43■■■■□ 3,58
Hoxa9-202ENSMUST00000114425 Baz1bQ9Z277 1479 aa37,39■■■■□ 3,58
Hoxa9-202ENSMUST00000114425 Unc13aQ4KUS2 1712 aa37,35■■■■□ 3,57
Hoxa9-202ENSMUST00000114425 CftrP26361 1476 aa37,33■■■■□ 3,57
Hoxa9-202ENSMUST00000114425 Synj1Q8CHC4 1574 aa37,33■■■■□ 3,57
Hoxa9-202ENSMUST00000114425 Brd4Q9ESU6 1400 aaKnown RBP37,32■■■■□ 3,56
Hoxa9-202ENSMUST00000114425 Ccdc136Q3TVA9 1136 aa37,12■■■■□ 3,53
Hoxa9-202ENSMUST00000114425 Ubl4bQ9CQ84 188 aa37,03■■■■□ 3,52
Hoxa9-202ENSMUST00000114425 Mrc2Q64449 1479 aa36,87■■■■□ 3,49
Hoxa9-202ENSMUST00000114425 Esf1Q3V1V3 845 aaKnown RBP36,68■■■■□ 3,46
Hoxa9-202ENSMUST00000114425 Trim41Q5NCC3 630 aa36,62■■■■□ 3,45
Hoxa9-202ENSMUST00000114425 Rsf1E9PWW9 1441 aaKnown RBP36,46■■■■□ 3,43
Hoxa9-202ENSMUST00000114425 Kif15Q6P9L6 1387 aa36,36■■■■□ 3,41
Hoxa9-202ENSMUST00000114425 Cux2P70298 1426 aa36,3■■■■□ 3,4
Hoxa9-202ENSMUST00000114425 Lamc3Q9R0B6 1581 aa36,3■■■■□ 3,4
Hoxa9-202ENSMUST00000114425 Lrriq1Q0P5X1 1673 aa36,14■■■■□ 3,38
Hoxa9-202ENSMUST00000114425 Kif21aQ9QXL2 1672 aa36,13■■■■□ 3,37
Hoxa9-202ENSMUST00000114425 Top2bQ64511 1612 aa36,05■■■■□ 3,36
Hoxa9-202ENSMUST00000114425 Golga3P55937 1487 aa36,01■■■■□ 3,36
Hoxa9-202ENSMUST00000114425 TnnQ80Z71 1560 aa35,95■■■■□ 3,35
Hoxa9-202ENSMUST00000114425 Npm1Q61937 292 aaKnown RBP35,91■■■■□ 3,34
Hoxa9-202ENSMUST00000114425 Cep164Q5DU05 1446 aa35,87■■■■□ 3,33
Hoxa9-202ENSMUST00000114425 Cngb1E1AZ71 1325 aa35,83■■■■□ 3,33
Hoxa9-202ENSMUST00000114425 Ccdc18Q640L5 1455 aa35,79■■■■□ 3,32
Hoxa9-202ENSMUST00000114425 Camsap1A2AHC3 1581 aa35,68■■■■□ 3,3
Hoxa9-202ENSMUST00000114425 Eif4g3Q80XI3 1579 aaKnown RBP35,64■■■■□ 3,3
Hoxa9-202ENSMUST00000114425 Fmn1Q05860 1466 aa35,63■■■■□ 3,29
Hoxa9-202ENSMUST00000114425 Il27Q8K3I6 234 aa35,57■■■■□ 3,28
Hoxa9-202ENSMUST00000114425 Dhx29Q6PGC1 1365 aaKnown RBP35,54■■■■□ 3,28
Hoxa9-202ENSMUST00000114425 Crocc2F6XLV1 1638 aa35,51■■■■□ 3,28
Hoxa9-202ENSMUST00000114425 LrpprcQ6PB66 1392 aaKnown RBP35,49■■■■□ 3,27
Hoxa9-202ENSMUST00000114425 Urb2E9Q7L1 1524 aaKnown RBP35,47■■■■□ 3,27
Hoxa9-202ENSMUST00000114425 Plb1Q3TTY0 1478 aa35,4■■■■□ 3,26
Hoxa9-202ENSMUST00000114425 PogzQ8BZH4 1409 aaKnown RBP35,31■■■■□ 3,24
Hoxa9-202ENSMUST00000114425 Ift140E9PY46 1464 aa35,17■■■■□ 3,22
Hoxa9-202ENSMUST00000114425 Duox2A2AQ99 1517 aa35,14■■■■□ 3,22
Hoxa9-202ENSMUST00000114425 Grin2bQ01097 1482 aa35,14■■■■□ 3,22
Hoxa9-202ENSMUST00000114425 Rusc2Q80U22 1514 aa35,06■■■■□ 3,2
Hoxa9-202ENSMUST00000114425 Shroom2A2ALU4 1481 aa35,05■■■■□ 3,2
Hoxa9-202ENSMUST00000114425 Ccdc88bQ4QRL3 1481 aa34,99■■■■□ 3,19
Hoxa9-202ENSMUST00000114425 Top2aQ01320 1528 aaKnown RBP34,96■■■■□ 3,19
Hoxa9-202ENSMUST00000114425 Pbrm1Q8BSQ9 1634 aaKnown RBP34,95■■■■□ 3,19
Hoxa9-202ENSMUST00000114425 Dnajc5P60904 198 aa34,95■■■■□ 3,19
Hoxa9-202ENSMUST00000114425 Samd9lQ69Z37 1561 aa34,94■■■■□ 3,18
Hoxa9-202ENSMUST00000114425 Setd1bQ8CFT2 1985 aa34,88■■■■□ 3,17
Hoxa9-202ENSMUST00000114425 Efcab5A0JP43 1406 aa34,88■■■■□ 3,17
Hoxa9-202ENSMUST00000114425 Disp1Q3TDN0 1521 aa34,85■■■■□ 3,17
Hoxa9-202ENSMUST00000114425 NrkQ9R0G8 1455 aa34,78■■■■□ 3,16
Hoxa9-202ENSMUST00000114425 Nup160Q9Z0W3 1402 aaKnown RBP34,72■■■■□ 3,15
Hoxa9-202ENSMUST00000114425 Cc2d2bA0A286YDU8 1405 aa34,69■■■■□ 3,14
Hoxa9-202ENSMUST00000114425 Chic1Q8CBW7 227 aa34,66■■■■□ 3,14
Hoxa9-202ENSMUST00000114425 Pabpn1Q8CCS6 302 aaKnown RBP34,65■■■■□ 3,14
Hoxa9-202ENSMUST00000114425 Shroom4Q1W617 1475 aa34,65■■■■□ 3,14
Hoxa9-202ENSMUST00000114425 Rad54l2Q99NG0 1466 aa34,61■■■■□ 3,13
Hoxa9-202ENSMUST00000114425 Grin2aP35436 1464 aa34,58■■■■□ 3,13
Hoxa9-202ENSMUST00000114425 Magi3Q9EQJ9 1476 aa34,56■■■■□ 3,12
Hoxa9-202ENSMUST00000114425 PtprkP35822 1457 aa34,51■■■■□ 3,11
Hoxa9-202ENSMUST00000114425 Pelp1Q9DBD5 1123 aaKnown RBP34,49■■■■□ 3,11
Hoxa9-202ENSMUST00000114425 AqrQ8CFQ3 1481 aaKnown RBP34,49■■■■□ 3,11
Hoxa9-202ENSMUST00000114425 Col17a1Q07563 1470 aa34,48■■■■□ 3,11
Hoxa9-202ENSMUST00000114425 SynmQ70IV5 1561 aa34,48■■■■□ 3,11
Hoxa9-202ENSMUST00000114425 Gpatch8A2A6A1 1505 aa34,45■■■■□ 3,11
Hoxa9-202ENSMUST00000114425 Pla2r1Q62028 1487 aa34,37■■■■□ 3,09
Hoxa9-202ENSMUST00000114425 Zcchc11B2RX14 1644 aaKnown RBP34,33■■■■□ 3,09
Hoxa9-202ENSMUST00000114425 Zeb1Q64318 1117 aa34,31■■■■□ 3,08
Hoxa9-202ENSMUST00000114425 Fgd6Q69ZL1 1399 aa34,29■■■■□ 3,08
Hoxa9-202ENSMUST00000114425 Npm2Q80W85 207 aa34,18■■■■□ 3,06
Hoxa9-202ENSMUST00000114425 Mroh2bQ7M6Y6 1581 aa34,15■■■■□ 3,06
Hoxa9-202ENSMUST00000114425 TchhA0A0B4J1F9 1599 aa34,11■■■■□ 3,05
Retrieved 100 of 22,080 RNA–protein pairs in 31,2 ms