RNA–Protein interactions for RNA: ENSMUST00000114011.10

Lsm2-202, Transcript of U6 snRNA-associated Sm-like protein LSm2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lsm2, Length 840 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2-202ENSMUST00000114011 Gm35339A0A140LHH9 1649 aa30.87■■■□□ 2.53
Lsm2-202ENSMUST00000114011 NischQ80TM9 1593 aa30.34■■■□□ 2.45
Lsm2-202ENSMUST00000114011 Abcc8B2RUS7 1588 aa29.49■■■□□ 2.31
Lsm2-202ENSMUST00000114011 Abcc9P70170 1546 aa29.34■■■□□ 2.29
Lsm2-202ENSMUST00000114011 ScribQ80U72 1612 aa28.63■■■□□ 2.17
Lsm2-202ENSMUST00000114011 NacadQ5SWP3 1504 aa27.77■■■□□ 2.04
Lsm2-202ENSMUST00000114011 Kdm5dQ62240 1548 aa27.62■■■□□ 2.01
Lsm2-202ENSMUST00000114011 Sycp2Q9CUU3 1500 aa27.25■■□□□ 1.95
Lsm2-202ENSMUST00000114011 Dcaf1Q80TR8 1506 aa27.02■■□□□ 1.92
Lsm2-202ENSMUST00000114011 Dnajc5bQ9CQ94 199 aa26.93■■□□□ 1.9
Lsm2-202ENSMUST00000114011 BicraF8VPZ9 1578 aa26.89■■□□□ 1.9
Lsm2-202ENSMUST00000114011 Rb1cc1Q9ESK9 1588 aa26.37■■□□□ 1.81
Lsm2-202ENSMUST00000114011 Pds5bQ4VA53 1446 aaKnown RBP26.35■■□□□ 1.81
Lsm2-202ENSMUST00000114011 Thoc2B1AZI6 1594 aaKnown RBP26.2■■□□□ 1.79
Lsm2-202ENSMUST00000114011 Crybg2B7ZCC2 1516 aa26.06■■□□□ 1.76
Lsm2-202ENSMUST00000114011 Baz1aO88379 1555 aa25.99■■□□□ 1.75
Lsm2-202ENSMUST00000114011 Atad2bE9Q166 1460 aaKnown RBP25.98■■□□□ 1.75
Lsm2-202ENSMUST00000114011 Ccdc180J3QNE4 1664 aa25.85■■□□□ 1.73
Lsm2-202ENSMUST00000114011 Rhox8Q6VSS7 320 aa25.81■■□□□ 1.72
Lsm2-202ENSMUST00000114011 Cc2d2aQ8CFW7 1633 aa25.75■■□□□ 1.71
Lsm2-202ENSMUST00000114011 Ercc6F8VPZ5 1481 aa25.72■■□□□ 1.71
Lsm2-202ENSMUST00000114011 Zcchc6Q5BLK4 1491 aaKnown RBP25.72■■□□□ 1.71
Lsm2-202ENSMUST00000114011 Smarca2Q6DIC0 1577 aa25.58■■□□□ 1.69
Lsm2-202ENSMUST00000114011 Fam135aQ6NS59 1506 aa25.54■■□□□ 1.68
Lsm2-202ENSMUST00000114011 Smarca4Q3TKT4 1613 aaKnown RBP25.51■■□□□ 1.67
Lsm2-202ENSMUST00000114011 Iqgap2Q3UQ44 1575 aa25.44■■□□□ 1.66
Lsm2-202ENSMUST00000114011 Baz1bQ9Z277 1479 aa25.35■■□□□ 1.65
Lsm2-202ENSMUST00000114011 Phldb1Q6PDH0 1371 aaKnown RBP25.35■■□□□ 1.65
Lsm2-202ENSMUST00000114011 Cecr2E9Q2Z1 1453 aa25.33■■□□□ 1.65
Lsm2-202ENSMUST00000114011 Wdr62Q3U3T8 1523 aa25.32■■□□□ 1.64
Lsm2-202ENSMUST00000114011 Frmpd1A2AKB4 1549 aa25.31■■□□□ 1.64
Lsm2-202ENSMUST00000114011 Ubl4bQ9CQ84 188 aa25.15■■□□□ 1.62
Lsm2-202ENSMUST00000114011 Mrc2Q64449 1479 aa24.97■■□□□ 1.59
Lsm2-202ENSMUST00000114011 Dnajc5P60904 198 aa24.9■■□□□ 1.58
Lsm2-202ENSMUST00000114011 Unc13aQ4KUS2 1712 aa24.73■■□□□ 1.55
Lsm2-202ENSMUST00000114011 CftrP26361 1476 aa24.7■■□□□ 1.54
Lsm2-202ENSMUST00000114011 Trim41Q5NCC3 630 aa24.65■■□□□ 1.54
Lsm2-202ENSMUST00000114011 Cttnbp2B9EJA2 1648 aa24.58■■□□□ 1.53
Lsm2-202ENSMUST00000114011 Brd4Q9ESU6 1400 aaKnown RBP24.52■■□□□ 1.52
Lsm2-202ENSMUST00000114011 Synj1Q8CHC4 1574 aa24.52■■□□□ 1.52
Lsm2-202ENSMUST00000114011 Rsf1E9PWW9 1441 aaKnown RBP24.38■■□□□ 1.49
Lsm2-202ENSMUST00000114011 Cux2P70298 1426 aa24.37■■□□□ 1.49
Lsm2-202ENSMUST00000114011 Lrriq1Q0P5X1 1673 aa24.36■■□□□ 1.49
Lsm2-202ENSMUST00000114011 Kif15Q6P9L6 1387 aa24.29■■□□□ 1.48
Lsm2-202ENSMUST00000114011 Esf1Q3V1V3 845 aaKnown RBP24.27■■□□□ 1.48
Lsm2-202ENSMUST00000114011 Ccdc136Q3TVA9 1136 aa24.25■■□□□ 1.47
Lsm2-202ENSMUST00000114011 Rtl1Q7M732 1744 aa24.17■■□□□ 1.46
Lsm2-202ENSMUST00000114011 Kif21aQ9QXL2 1672 aa24.14■■□□□ 1.45
Lsm2-202ENSMUST00000114011 Npm1Q61937 292 aaKnown RBP24.13■■□□□ 1.45
Lsm2-202ENSMUST00000114011 Shroom2A2ALU4 1481 aa24.11■■□□□ 1.45
Lsm2-202ENSMUST00000114011 Lamc3Q9R0B6 1581 aa24.04■■□□□ 1.44
Lsm2-202ENSMUST00000114011 Eif4g3Q80XI3 1579 aaKnown RBP24.03■■□□□ 1.44
Lsm2-202ENSMUST00000114011 Cep164Q5DU05 1446 aa23.99■■□□□ 1.43
Lsm2-202ENSMUST00000114011 Col17a1Q07563 1470 aa23.86■■□□□ 1.41
Lsm2-202ENSMUST00000114011 Urb2E9Q7L1 1524 aaKnown RBP23.85■■□□□ 1.41
Lsm2-202ENSMUST00000114011 Pabpn1Q8CCS6 302 aaKnown RBP23.83■■□□□ 1.41
Lsm2-202ENSMUST00000114011 Plb1Q3TTY0 1478 aa23.82■■□□□ 1.4
Lsm2-202ENSMUST00000114011 Dhx29Q6PGC1 1365 aaKnown RBP23.82■■□□□ 1.4
Lsm2-202ENSMUST00000114011 Ccdc18Q640L5 1455 aa23.75■■□□□ 1.39
Lsm2-202ENSMUST00000114011 LrpprcQ6PB66 1392 aaKnown RBP23.73■■□□□ 1.39
Lsm2-202ENSMUST00000114011 Il27Q8K3I6 234 aa23.71■■□□□ 1.39
Lsm2-202ENSMUST00000114011 Top2bQ64511 1612 aa23.69■■□□□ 1.38
Lsm2-202ENSMUST00000114011 Crocc2F6XLV1 1638 aa23.62■■□□□ 1.37
Lsm2-202ENSMUST00000114011 Ift140E9PY46 1464 aa23.61■■□□□ 1.37
Lsm2-202ENSMUST00000114011 TnnQ80Z71 1560 aa23.6■■□□□ 1.37
Lsm2-202ENSMUST00000114011 Pelp1Q9DBD5 1123 aaKnown RBP23.58■■□□□ 1.37
Lsm2-202ENSMUST00000114011 Rusc2Q80U22 1514 aa23.56■■□□□ 1.36
Lsm2-202ENSMUST00000114011 Camsap1A2AHC3 1581 aa23.53■■□□□ 1.36
Lsm2-202ENSMUST00000114011 PogzQ8BZH4 1409 aaKnown RBP23.52■■□□□ 1.36
Lsm2-202ENSMUST00000114011 Zcchc11B2RX14 1644 aaKnown RBP23.49■■□□□ 1.35
Lsm2-202ENSMUST00000114011 Golga3P55937 1487 aa23.46■■□□□ 1.35
Lsm2-202ENSMUST00000114011 Duox2A2AQ99 1517 aa23.38■■□□□ 1.33
Lsm2-202ENSMUST00000114011 Chic1Q8CBW7 227 aa23.37■■□□□ 1.33
Lsm2-202ENSMUST00000114011 Cngb1E1AZ71 1325 aa23.36■■□□□ 1.33
Lsm2-202ENSMUST00000114011 Disp1Q3TDN0 1521 aa23.36■■□□□ 1.33
Lsm2-202ENSMUST00000114011 Cc2d2bA0A286YDU8 1405 aa23.3■■□□□ 1.32
Lsm2-202ENSMUST00000114011 Fmn1Q05860 1466 aa23.3■■□□□ 1.32
Lsm2-202ENSMUST00000114011 Nup160Q9Z0W3 1402 aaKnown RBP23.26■■□□□ 1.31
Lsm2-202ENSMUST00000114011 Grin2bQ01097 1482 aa23.23■■□□□ 1.31
Lsm2-202ENSMUST00000114011 Mapk8ip2Q9ERE9 830 aa23.21■■□□□ 1.31
Lsm2-202ENSMUST00000114011 Adgrl3Q80TS3 1537 aa23.18■■□□□ 1.3
Lsm2-202ENSMUST00000114011 Efcab5A0JP43 1406 aa23.16■■□□□ 1.3
Lsm2-202ENSMUST00000114011 Pcdh10E9PXQ7 1057 aa23.16■■□□□ 1.3
Lsm2-202ENSMUST00000114011 Pbrm1Q8BSQ9 1634 aaKnown RBP23.15■■□□□ 1.3
Lsm2-202ENSMUST00000114011 PtprkP35822 1457 aa23.13■■□□□ 1.29
Lsm2-202ENSMUST00000114011 Fgd6Q69ZL1 1399 aa23.13■■□□□ 1.29
Lsm2-202ENSMUST00000114011 Samd9lQ69Z37 1561 aa23.12■■□□□ 1.29
Lsm2-202ENSMUST00000114011 Arhgef5E9Q7D5 1581 aa23.11■■□□□ 1.29
Lsm2-202ENSMUST00000114011 Gm156Q58A37 223 aa23.09■■□□□ 1.29
Lsm2-202ENSMUST00000114011 Ttbk1Q6PCN3 1308 aa23.08■■□□□ 1.29
Lsm2-202ENSMUST00000114011 Gapvd1Q6PAR5 1458 aa23.05■■□□□ 1.28
Lsm2-202ENSMUST00000114011 AqrQ8CFQ3 1481 aaKnown RBP23.05■■□□□ 1.28
Lsm2-202ENSMUST00000114011 Cep170Q6A065 1588 aa23.03■■□□□ 1.28
Lsm2-202ENSMUST00000114011 Grin2aP35436 1464 aa23.02■■□□□ 1.28
Lsm2-202ENSMUST00000114011 Rad54l2Q99NG0 1466 aa23.02■■□□□ 1.28
Lsm2-202ENSMUST00000114011 PtprtQ99M80 1454 aa23■■□□□ 1.27
Lsm2-202ENSMUST00000114011 Magi3Q9EQJ9 1476 aa22.98■■□□□ 1.27
Lsm2-202ENSMUST00000114011 Setd1bQ8CFT2 1985 aa22.98■■□□□ 1.27
Lsm2-202ENSMUST00000114011 AknaQ80VW7 1404 aa22.9■■□□□ 1.26
Lsm2-202ENSMUST00000114011 NrkQ9R0G8 1455 aa22.87■■□□□ 1.25
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms