RNA–Protein interactions for RNA: ENSMUST00000111355.7

Nr1h3-203, Transcript of Oxysterols receptor LXR-alpha, mousemouse

TSL 5 BASIC

Gene Nr1h3, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3-203ENSMUST00000111355 Gm35339A0A140LHH9 1649 aa26.37■■□□□ 1.81
Nr1h3-203ENSMUST00000111355 NischQ80TM9 1593 aa25.99■■□□□ 1.75
Nr1h3-203ENSMUST00000111355 Abcc8B2RUS7 1588 aa25.15■■□□□ 1.62
Nr1h3-203ENSMUST00000111355 Abcc9P70170 1546 aa25.14■■□□□ 1.62
Nr1h3-203ENSMUST00000111355 ScribQ80U72 1612 aa24.39■■□□□ 1.5
Nr1h3-203ENSMUST00000111355 Kdm5dQ62240 1548 aa23.48■■□□□ 1.35
Nr1h3-203ENSMUST00000111355 NacadQ5SWP3 1504 aa23.41■■□□□ 1.34
Nr1h3-203ENSMUST00000111355 Dcaf1Q80TR8 1506 aa23.04■■□□□ 1.28
Nr1h3-203ENSMUST00000111355 Sycp2Q9CUU3 1500 aa23.01■■□□□ 1.27
Nr1h3-203ENSMUST00000111355 BicraF8VPZ9 1578 aa22.82■■□□□ 1.24
Nr1h3-203ENSMUST00000111355 Rb1cc1Q9ESK9 1588 aa22.66■■□□□ 1.22
Nr1h3-203ENSMUST00000111355 Rhox8Q6VSS7 320 aa22.37■■□□□ 1.17
Nr1h3-203ENSMUST00000111355 Dnajc5bQ9CQ94 199 aa22.31■■□□□ 1.16
Nr1h3-203ENSMUST00000111355 Baz1aO88379 1555 aa22.29■■□□□ 1.16
Nr1h3-203ENSMUST00000111355 Ccdc180J3QNE4 1664 aa22.24■■□□□ 1.15
Nr1h3-203ENSMUST00000111355 Crybg2B7ZCC2 1516 aa22.1■■□□□ 1.13
Nr1h3-203ENSMUST00000111355 Zcchc6Q5BLK4 1491 aaKnown RBP21.98■■□□□ 1.11
Nr1h3-203ENSMUST00000111355 Pds5bQ4VA53 1446 aaKnown RBP21.94■■□□□ 1.1
Nr1h3-203ENSMUST00000111355 Thoc2B1AZI6 1594 aaKnown RBP21.93■■□□□ 1.1
Nr1h3-203ENSMUST00000111355 Atad2bE9Q166 1460 aaKnown RBP21.78■■□□□ 1.08
Nr1h3-203ENSMUST00000111355 Cecr2E9Q2Z1 1453 aa21.71■■□□□ 1.07
Nr1h3-203ENSMUST00000111355 Smarca2Q6DIC0 1577 aa21.67■■□□□ 1.06
Nr1h3-203ENSMUST00000111355 Rtl1Q7M732 1744 aa21.66■■□□□ 1.06
Nr1h3-203ENSMUST00000111355 Smarca4Q3TKT4 1613 aaKnown RBP21.66■■□□□ 1.06
Nr1h3-203ENSMUST00000111355 Cc2d2aQ8CFW7 1633 aa21.61■■□□□ 1.05
Nr1h3-203ENSMUST00000111355 Iqgap2Q3UQ44 1575 aa21.57■■□□□ 1.04
Nr1h3-203ENSMUST00000111355 Ercc6F8VPZ5 1481 aa21.49■■□□□ 1.03
Nr1h3-203ENSMUST00000111355 Frmpd1A2AKB4 1549 aa21.38■■□□□ 1.01
Nr1h3-203ENSMUST00000111355 Wdr62Q3U3T8 1523 aa21.38■■□□□ 1.01
Nr1h3-203ENSMUST00000111355 Fam135aQ6NS59 1506 aa21.36■■□□□ 1.01
Nr1h3-203ENSMUST00000111355 Unc13aQ4KUS2 1712 aa21.28■■□□□ 1
Nr1h3-203ENSMUST00000111355 Synj1Q8CHC4 1574 aa21.14■□□□□ 0.97
Nr1h3-203ENSMUST00000111355 Phldb1Q6PDH0 1371 aaKnown RBP21.13■□□□□ 0.97
Nr1h3-203ENSMUST00000111355 CftrP26361 1476 aa21.09■□□□□ 0.97
Nr1h3-203ENSMUST00000111355 Cttnbp2B9EJA2 1648 aa21.08■□□□□ 0.97
Nr1h3-203ENSMUST00000111355 Ccdc136Q3TVA9 1136 aa21.03■□□□□ 0.96
Nr1h3-203ENSMUST00000111355 Ubl4bQ9CQ84 188 aa20.98■□□□□ 0.95
Nr1h3-203ENSMUST00000111355 Brd4Q9ESU6 1400 aaKnown RBP20.92■□□□□ 0.94
Nr1h3-203ENSMUST00000111355 Baz1bQ9Z277 1479 aa20.84■□□□□ 0.93
Nr1h3-203ENSMUST00000111355 Mrc2Q64449 1479 aa20.83■□□□□ 0.93
Nr1h3-203ENSMUST00000111355 Esf1Q3V1V3 845 aaKnown RBP20.64■□□□□ 0.9
Nr1h3-203ENSMUST00000111355 Cux2P70298 1426 aa20.53■□□□□ 0.88
Nr1h3-203ENSMUST00000111355 Kif15Q6P9L6 1387 aa20.53■□□□□ 0.88
Nr1h3-203ENSMUST00000111355 Lrriq1Q0P5X1 1673 aa20.53■□□□□ 0.88
Nr1h3-203ENSMUST00000111355 Kif21aQ9QXL2 1672 aa20.52■□□□□ 0.88
Nr1h3-203ENSMUST00000111355 Rsf1E9PWW9 1441 aaKnown RBP20.5■□□□□ 0.87
Nr1h3-203ENSMUST00000111355 Trim41Q5NCC3 630 aa20.49■□□□□ 0.87
Nr1h3-203ENSMUST00000111355 Lamc3Q9R0B6 1581 aa20.49■□□□□ 0.87
Nr1h3-203ENSMUST00000111355 Top2bQ64511 1612 aa20.34■□□□□ 0.85
Nr1h3-203ENSMUST00000111355 TnnQ80Z71 1560 aa20.29■□□□□ 0.84
Nr1h3-203ENSMUST00000111355 Golga3P55937 1487 aa20.25■□□□□ 0.83
Nr1h3-203ENSMUST00000111355 Npm1Q61937 292 aaKnown RBP20.23■□□□□ 0.83
Nr1h3-203ENSMUST00000111355 Cngb1E1AZ71 1325 aa20.19■□□□□ 0.82
Nr1h3-203ENSMUST00000111355 Il27Q8K3I6 234 aa20.16■□□□□ 0.82
Nr1h3-203ENSMUST00000111355 Cep164Q5DU05 1446 aa20.15■□□□□ 0.82
Nr1h3-203ENSMUST00000111355 Camsap1A2AHC3 1581 aa20.14■□□□□ 0.82
Nr1h3-203ENSMUST00000111355 Eif4g3Q80XI3 1579 aaKnown RBP20.14■□□□□ 0.82
Nr1h3-203ENSMUST00000111355 Urb2E9Q7L1 1524 aaKnown RBP20.14■□□□□ 0.81
Nr1h3-203ENSMUST00000111355 Dhx29Q6PGC1 1365 aaKnown RBP20.1■□□□□ 0.81
Nr1h3-203ENSMUST00000111355 Plb1Q3TTY0 1478 aa20.08■□□□□ 0.81
Nr1h3-203ENSMUST00000111355 HrcG5E8J6 738 aa20.07■□□□□ 0.8
Nr1h3-203ENSMUST00000111355 Ccdc18Q640L5 1455 aa20.07■□□□□ 0.8
Nr1h3-203ENSMUST00000111355 Crocc2F6XLV1 1638 aa20.04■□□□□ 0.8
Nr1h3-203ENSMUST00000111355 LrpprcQ6PB66 1392 aaKnown RBP20.03■□□□□ 0.8
Nr1h3-203ENSMUST00000111355 Fmn1Q05860 1466 aa20■□□□□ 0.79
Nr1h3-203ENSMUST00000111355 Dnajc5P60904 198 aa20■□□□□ 0.79
Nr1h3-203ENSMUST00000111355 Setd1bQ8CFT2 1985 aa19.94■□□□□ 0.78
Nr1h3-203ENSMUST00000111355 PogzQ8BZH4 1409 aaKnown RBP19.93■□□□□ 0.78
Nr1h3-203ENSMUST00000111355 Duox2A2AQ99 1517 aa19.86■□□□□ 0.77
Nr1h3-203ENSMUST00000111355 Ccdc88bQ4QRL3 1481 aa19.84■□□□□ 0.77
Nr1h3-203ENSMUST00000111355 Shroom2A2ALU4 1481 aa19.83■□□□□ 0.77
Nr1h3-203ENSMUST00000111355 Grin2bQ01097 1482 aa19.83■□□□□ 0.77
Nr1h3-203ENSMUST00000111355 Rusc2Q80U22 1514 aa19.81■□□□□ 0.76
Nr1h3-203ENSMUST00000111355 Samd9lQ69Z37 1561 aa19.8■□□□□ 0.76
Nr1h3-203ENSMUST00000111355 Ift140E9PY46 1464 aa19.79■□□□□ 0.76
Nr1h3-203ENSMUST00000111355 Disp1Q3TDN0 1521 aa19.76■□□□□ 0.75
Nr1h3-203ENSMUST00000111355 Chic1Q8CBW7 227 aa19.71■□□□□ 0.75
Nr1h3-203ENSMUST00000111355 Top2aQ01320 1528 aaKnown RBP19.68■□□□□ 0.74
Nr1h3-203ENSMUST00000111355 Rad54l2Q99NG0 1466 aa19.66■□□□□ 0.74
Nr1h3-203ENSMUST00000111355 Col17a1Q07563 1470 aa19.63■□□□□ 0.73
Nr1h3-203ENSMUST00000111355 Nup160Q9Z0W3 1402 aaKnown RBP19.63■□□□□ 0.73
Nr1h3-203ENSMUST00000111355 PtprkP35822 1457 aa19.62■□□□□ 0.73
Nr1h3-203ENSMUST00000111355 Efcab5A0JP43 1406 aa19.61■□□□□ 0.73
Nr1h3-203ENSMUST00000111355 Pbrm1Q8BSQ9 1634 aaKnown RBP19.61■□□□□ 0.73
Nr1h3-203ENSMUST00000111355 Pabpn1Q8CCS6 302 aaKnown RBP19.6■□□□□ 0.73
Nr1h3-203ENSMUST00000111355 Magi3Q9EQJ9 1476 aa19.58■□□□□ 0.73
Nr1h3-203ENSMUST00000111355 NrkQ9R0G8 1455 aa19.55■□□□□ 0.72
Nr1h3-203ENSMUST00000111355 Pelp1Q9DBD5 1123 aaKnown RBP19.55■□□□□ 0.72
Nr1h3-203ENSMUST00000111355 Grin2aP35436 1464 aa19.54■□□□□ 0.72
Nr1h3-203ENSMUST00000111355 Cc2d2bA0A286YDU8 1405 aa19.51■□□□□ 0.71
Nr1h3-203ENSMUST00000111355 Shroom4Q1W617 1475 aa19.5■□□□□ 0.71
Nr1h3-203ENSMUST00000111355 Pla2r1Q62028 1487 aa19.46■□□□□ 0.71
Nr1h3-203ENSMUST00000111355 AqrQ8CFQ3 1481 aaKnown RBP19.44■□□□□ 0.7
Nr1h3-203ENSMUST00000111355 SynmQ70IV5 1561 aa19.43■□□□□ 0.7
Nr1h3-203ENSMUST00000111355 Gpatch8A2A6A1 1505 aa19.37■□□□□ 0.69
Nr1h3-203ENSMUST00000111355 Zcchc11B2RX14 1644 aaKnown RBP19.35■□□□□ 0.69
Nr1h3-203ENSMUST00000111355 Fgd6Q69ZL1 1399 aa19.33■□□□□ 0.68
Nr1h3-203ENSMUST00000111355 Abca16E9PWJ7 1678 aa19.32■□□□□ 0.68
Nr1h3-203ENSMUST00000111355 Chd1P40201 1711 aa19.3■□□□□ 0.68
Nr1h3-203ENSMUST00000111355 WizO88286 1684 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 332.8 ms