RNA–Protein interactions for RNA: ENSMUST00000108275.1

Ift20-202, Transcript of Intraflagellar transport protein 20 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift20, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift20-202ENSMUST00000108275 NischQ80TM9 1593 aa25.03■■□□□ 1.6
Ift20-202ENSMUST00000108275 Gm35339A0A140LHH9 1649 aa25.01■■□□□ 1.59
Ift20-202ENSMUST00000108275 Abcc9P70170 1546 aa24.3■■□□□ 1.48
Ift20-202ENSMUST00000108275 Abcc8B2RUS7 1588 aa23.92■■□□□ 1.42
Ift20-202ENSMUST00000108275 Rhox8Q6VSS7 320 aa22.5■■□□□ 1.19
Ift20-202ENSMUST00000108275 ScribQ80U72 1612 aa22.49■■□□□ 1.19
Ift20-202ENSMUST00000108275 Dcaf1Q80TR8 1506 aa22.4■■□□□ 1.18
Ift20-202ENSMUST00000108275 Rtl1Q7M732 1744 aa22.15■■□□□ 1.14
Ift20-202ENSMUST00000108275 NacadQ5SWP3 1504 aa21.99■■□□□ 1.11
Ift20-202ENSMUST00000108275 Kdm5dQ62240 1548 aa21.97■■□□□ 1.11
Ift20-202ENSMUST00000108275 Ccdc180J3QNE4 1664 aa21.94■■□□□ 1.1
Ift20-202ENSMUST00000108275 Rb1cc1Q9ESK9 1588 aa21.89■■□□□ 1.09
Ift20-202ENSMUST00000108275 Baz1aO88379 1555 aa21.67■■□□□ 1.06
Ift20-202ENSMUST00000108275 Crybg2B7ZCC2 1516 aa21.54■■□□□ 1.04
Ift20-202ENSMUST00000108275 Sycp2Q9CUU3 1500 aa21.48■■□□□ 1.03
Ift20-202ENSMUST00000108275 Zcchc6Q5BLK4 1491 aaKnown RBP21.21■□□□□ 0.99
Ift20-202ENSMUST00000108275 Smarca2Q6DIC0 1577 aa21.12■□□□□ 0.97
Ift20-202ENSMUST00000108275 BicraF8VPZ9 1578 aa20.98■□□□□ 0.95
Ift20-202ENSMUST00000108275 Ccdc136Q3TVA9 1136 aa20.86■□□□□ 0.93
Ift20-202ENSMUST00000108275 Trim41Q5NCC3 630 aa20.74■□□□□ 0.91
Ift20-202ENSMUST00000108275 Dnajc5bQ9CQ94 199 aa20.65■□□□□ 0.9
Ift20-202ENSMUST00000108275 Brd4Q9ESU6 1400 aaKnown RBP20.62■□□□□ 0.89
Ift20-202ENSMUST00000108275 Cecr2E9Q2Z1 1453 aa20.59■□□□□ 0.89
Ift20-202ENSMUST00000108275 HrcG5E8J6 738 aa20.55■□□□□ 0.88
Ift20-202ENSMUST00000108275 Smarca4Q3TKT4 1613 aaKnown RBP20.47■□□□□ 0.87
Ift20-202ENSMUST00000108275 Synj1Q8CHC4 1574 aa20.39■□□□□ 0.85
Ift20-202ENSMUST00000108275 Cttnbp2B9EJA2 1648 aa20.37■□□□□ 0.85
Ift20-202ENSMUST00000108275 CftrP26361 1476 aa20.35■□□□□ 0.85
Ift20-202ENSMUST00000108275 Pds5bQ4VA53 1446 aaKnown RBP20.3■□□□□ 0.84
Ift20-202ENSMUST00000108275 Atad2bE9Q166 1460 aaKnown RBP20.27■□□□□ 0.84
Ift20-202ENSMUST00000108275 Iqgap2Q3UQ44 1575 aa20.21■□□□□ 0.83
Ift20-202ENSMUST00000108275 Golga3P55937 1487 aa20.2■□□□□ 0.82
Ift20-202ENSMUST00000108275 Mapk8ip2Q9ERE9 830 aa20.16■□□□□ 0.82
Ift20-202ENSMUST00000108275 Esf1Q3V1V3 845 aaKnown RBP20.09■□□□□ 0.81
Ift20-202ENSMUST00000108275 Top2bQ64511 1612 aa20.07■□□□□ 0.8
Ift20-202ENSMUST00000108275 Cngb1E1AZ71 1325 aa20.05■□□□□ 0.8
Ift20-202ENSMUST00000108275 Cep164Q5DU05 1446 aa20.04■□□□□ 0.8
Ift20-202ENSMUST00000108275 Chic1Q8CBW7 227 aa19.93■□□□□ 0.78
Ift20-202ENSMUST00000108275 Ercc6F8VPZ5 1481 aa19.89■□□□□ 0.77
Ift20-202ENSMUST00000108275 Wdr62Q3U3T8 1523 aa19.88■□□□□ 0.77
Ift20-202ENSMUST00000108275 Rsf1E9PWW9 1441 aaKnown RBP19.86■□□□□ 0.77
Ift20-202ENSMUST00000108275 Frmpd1A2AKB4 1549 aa19.84■□□□□ 0.77
Ift20-202ENSMUST00000108275 Fmn1Q05860 1466 aa19.8■□□□□ 0.76
Ift20-202ENSMUST00000108275 Ccdc88bQ4QRL3 1481 aa19.8■□□□□ 0.76
Ift20-202ENSMUST00000108275 Cc2d2aQ8CFW7 1633 aa19.78■□□□□ 0.76
Ift20-202ENSMUST00000108275 Thoc2B1AZI6 1594 aaKnown RBP19.72■□□□□ 0.75
Ift20-202ENSMUST00000108275 Unc13aQ4KUS2 1712 aa19.65■□□□□ 0.74
Ift20-202ENSMUST00000108275 TnnQ80Z71 1560 aa19.63■□□□□ 0.73
Ift20-202ENSMUST00000108275 Lamc3Q9R0B6 1581 aa19.59■□□□□ 0.73
Ift20-202ENSMUST00000108275 Top2aQ01320 1528 aaKnown RBP19.58■□□□□ 0.73
Ift20-202ENSMUST00000108275 Phldb1Q6PDH0 1371 aaKnown RBP19.57■□□□□ 0.72
Ift20-202ENSMUST00000108275 Fam135aQ6NS59 1506 aa19.48■□□□□ 0.71
Ift20-202ENSMUST00000108275 Gab3Q8BSM5 595 aa19.46■□□□□ 0.71
Ift20-202ENSMUST00000108275 Kif15Q6P9L6 1387 aa19.44■□□□□ 0.7
Ift20-202ENSMUST00000108275 Baz1bQ9Z277 1479 aa19.41■□□□□ 0.7
Ift20-202ENSMUST00000108275 Rapgef2Q8CHG7 1496 aa19.38■□□□□ 0.69
Ift20-202ENSMUST00000108275 Ubl4bQ9CQ84 188 aa19.34■□□□□ 0.69
Ift20-202ENSMUST00000108275 Camsap1A2AHC3 1581 aa19.32■□□□□ 0.68
Ift20-202ENSMUST00000108275 Ccdc18Q640L5 1455 aa19.31■□□□□ 0.68
Ift20-202ENSMUST00000108275 Dnajc5P60904 198 aa19.27■□□□□ 0.68
Ift20-202ENSMUST00000108275 Rpgrip1Q9EPQ2 1331 aa19.23■□□□□ 0.67
Ift20-202ENSMUST00000108275 Cux2P70298 1426 aa19.22■□□□□ 0.67
Ift20-202ENSMUST00000108275 NrkQ9R0G8 1455 aa19.21■□□□□ 0.67
Ift20-202ENSMUST00000108275 Cep162Q6ZQ06 1403 aa19.2■□□□□ 0.66
Ift20-202ENSMUST00000108275 Npm1Q61937 292 aaKnown RBP19.15■□□□□ 0.66
Ift20-202ENSMUST00000108275 Npm2Q80W85 207 aa19.15■□□□□ 0.66
Ift20-202ENSMUST00000108275 Eif4g1Q6NZJ6 1600 aaKnown RBP19.14■□□□□ 0.66
Ift20-202ENSMUST00000108275 Grin2bQ01097 1482 aa19.14■□□□□ 0.65
Ift20-202ENSMUST00000108275 Il27Q8K3I6 234 aa19.13■□□□□ 0.65
Ift20-202ENSMUST00000108275 Shroom4Q1W617 1475 aa19.13■□□□□ 0.65
Ift20-202ENSMUST00000108275 Acin1Q9JIX8 1338 aaKnown RBP19.06■□□□□ 0.64
Ift20-202ENSMUST00000108275 Ehmt2Q9Z148 1263 aaKnown RBP19.06■□□□□ 0.64
Ift20-202ENSMUST00000108275 PtprkP35822 1457 aa19.04■□□□□ 0.64
Ift20-202ENSMUST00000108275 LrpprcQ6PB66 1392 aaKnown RBP19.04■□□□□ 0.64
Ift20-202ENSMUST00000108275 Mrc2Q64449 1479 aa19.03■□□□□ 0.64
Ift20-202ENSMUST00000108275 Efcab5A0JP43 1406 aa19.02■□□□□ 0.64
Ift20-202ENSMUST00000108275 Map3k1P53349 1493 aa19.01■□□□□ 0.63
Ift20-202ENSMUST00000108275 Arhgap35Q91YM2 1499 aa19■□□□□ 0.63
Ift20-202ENSMUST00000108275 PogzQ8BZH4 1409 aaKnown RBP18.99■□□□□ 0.63
Ift20-202ENSMUST00000108275 Myt1lP97500 1187 aa18.95■□□□□ 0.62
Ift20-202ENSMUST00000108275 Duox2A2AQ99 1517 aa18.92■□□□□ 0.62
Ift20-202ENSMUST00000108275 Mroh2bQ7M6Y6 1581 aa18.92■□□□□ 0.62
Ift20-202ENSMUST00000108275 AqrQ8CFQ3 1481 aaKnown RBP18.89■□□□□ 0.61
Ift20-202ENSMUST00000108275 Dhx29Q6PGC1 1365 aaKnown RBP18.88■□□□□ 0.61
Ift20-202ENSMUST00000108275 Kif21aQ9QXL2 1672 aa18.88■□□□□ 0.61
Ift20-202ENSMUST00000108275 Clip1Q922J3 1391 aa18.85■□□□□ 0.61
Ift20-202ENSMUST00000108275 Crocc2F6XLV1 1638 aa18.85■□□□□ 0.61
Ift20-202ENSMUST00000108275 Zeb1Q64318 1117 aa18.83■□□□□ 0.6
Ift20-202ENSMUST00000108275 Eea1Q8BL66 1411 aa18.78■□□□□ 0.6
Ift20-202ENSMUST00000108275 SynmQ70IV5 1561 aa18.76■□□□□ 0.59
Ift20-202ENSMUST00000108275 Carmil1Q6EDY6 1374 aa18.76■□□□□ 0.59
Ift20-202ENSMUST00000108275 Samd9lQ69Z37 1561 aa18.74■□□□□ 0.59
Ift20-202ENSMUST00000108275 Erich3F6QRE9 1637 aa18.71■□□□□ 0.58
Ift20-202ENSMUST00000108275 Polr1aO35134 1717 aaKnown RBP18.7■□□□□ 0.58
Ift20-202ENSMUST00000108275 Setd5Q5XJV7 1441 aa18.69■□□□□ 0.58
Ift20-202ENSMUST00000108275 Rpap1Q80TE0 1409 aa18.66■□□□□ 0.58
Ift20-202ENSMUST00000108275 Ankrd26Q811D2 1581 aa18.64■□□□□ 0.58
Ift20-202ENSMUST00000108275 Arhgef5E9Q7D5 1581 aa18.64■□□□□ 0.57
Ift20-202ENSMUST00000108275 Plb1Q3TTY0 1478 aa18.62■□□□□ 0.57
Ift20-202ENSMUST00000108275 Pbrm1Q8BSQ9 1634 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 47.3 ms