RNA–Protein interactions for RNA: ENSMUST00000103635.2

Trav14n-3-201, Transcript of T cell receptor alpha variable 14N-3 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav14n-3, Length 280 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3-201ENSMUST00000103635 Mapk8ip2Q9ERE9 830 aa15.39■□□□□ 0.05
Trav14n-3-201ENSMUST00000103635 Chic1Q8CBW7 227 aa15.32■□□□□ 0.04
Trav14n-3-201ENSMUST00000103635 Gm35339A0A140LHH9 1649 aa14.22□□□□□ -0.13
Trav14n-3-201ENSMUST00000103635 Abcc9P70170 1546 aa13.94□□□□□ -0.18
Trav14n-3-201ENSMUST00000103635 NischQ80TM9 1593 aa13.74□□□□□ -0.21
Trav14n-3-201ENSMUST00000103635 Phf23Q8BSN5 401 aa13.69□□□□□ -0.22
Trav14n-3-201ENSMUST00000103635 Abcc8B2RUS7 1588 aa13.49□□□□□ -0.25
Trav14n-3-201ENSMUST00000103635 ScribQ80U72 1612 aa13.39□□□□□ -0.27
Trav14n-3-201ENSMUST00000103635 Dnajc5bQ9CQ94 199 aa13.36□□□□□ -0.27
Trav14n-3-201ENSMUST00000103635 Gab3Q8BSM5 595 aa12.95□□□□□ -0.34
Trav14n-3-201ENSMUST00000103635 NacadQ5SWP3 1504 aa12.91□□□□□ -0.34
Trav14n-3-201ENSMUST00000103635 Plppr3Q7TPB0 716 aa12.83□□□□□ -0.36
Trav14n-3-201ENSMUST00000103635 Dnajc5P60904 198 aa12.8□□□□□ -0.36
Trav14n-3-201ENSMUST00000103635 Kdm5dQ62240 1548 aa12.77□□□□□ -0.37
Trav14n-3-201ENSMUST00000103635 Sycp2Q9CUU3 1500 aa12.68□□□□□ -0.38
Trav14n-3-201ENSMUST00000103635 BicraF8VPZ9 1578 aa12.63□□□□□ -0.39
Trav14n-3-201ENSMUST00000103635 Thoc2B1AZI6 1594 aaKnown RBP12.54□□□□□ -0.4
Trav14n-3-201ENSMUST00000103635 Pds5bQ4VA53 1446 aaKnown RBP12.42□□□□□ -0.42
Trav14n-3-201ENSMUST00000103635 Senp3Q9EP97 568 aaKnown RBP12.37□□□□□ -0.43
Trav14n-3-201ENSMUST00000103635 Cc2d2aQ8CFW7 1633 aa12.33□□□□□ -0.44
Trav14n-3-201ENSMUST00000103635 Dcaf1Q80TR8 1506 aa12.27□□□□□ -0.45
Trav14n-3-201ENSMUST00000103635 Trim41Q5NCC3 630 aa12.24□□□□□ -0.45
Trav14n-3-201ENSMUST00000103635 Atad2bE9Q166 1460 aaKnown RBP12.16□□□□□ -0.46
Trav14n-3-201ENSMUST00000103635 Fam135aQ6NS59 1506 aa12.11□□□□□ -0.47
Trav14n-3-201ENSMUST00000103635 Ercc6F8VPZ5 1481 aa12.08□□□□□ -0.48
Trav14n-3-201ENSMUST00000103635 Baz1bQ9Z277 1479 aa12□□□□□ -0.49
Trav14n-3-201ENSMUST00000103635 Rb1cc1Q9ESK9 1588 aa11.94□□□□□ -0.5
Trav14n-3-201ENSMUST00000103635 Phldb1Q6PDH0 1371 aaKnown RBP11.93□□□□□ -0.5
Trav14n-3-201ENSMUST00000103635 Smarca2Q6DIC0 1577 aa11.92□□□□□ -0.5
Trav14n-3-201ENSMUST00000103635 Ubl4bQ9CQ84 188 aa11.9□□□□□ -0.5
Trav14n-3-201ENSMUST00000103635 Mrc2Q64449 1479 aa11.83□□□□□ -0.52
Trav14n-3-201ENSMUST00000103635 Crybg2B7ZCC2 1516 aa11.83□□□□□ -0.52
Trav14n-3-201ENSMUST00000103635 Frmpd1A2AKB4 1549 aa11.81□□□□□ -0.52
Trav14n-3-201ENSMUST00000103635 Wdr62Q3U3T8 1523 aa11.81□□□□□ -0.52
Trav14n-3-201ENSMUST00000103635 Iqgap2Q3UQ44 1575 aa11.79□□□□□ -0.52
Trav14n-3-201ENSMUST00000103635 Smarca4Q3TKT4 1613 aaKnown RBP11.75□□□□□ -0.53
Trav14n-3-201ENSMUST00000103635 Shroom2A2ALU4 1481 aa11.74□□□□□ -0.53
Trav14n-3-201ENSMUST00000103635 Col17a1Q07563 1470 aa11.73□□□□□ -0.53
Trav14n-3-201ENSMUST00000103635 Baz1aO88379 1555 aa11.67□□□□□ -0.54
Trav14n-3-201ENSMUST00000103635 Rsf1E9PWW9 1441 aaKnown RBP11.63□□□□□ -0.55
Trav14n-3-201ENSMUST00000103635 Lrriq1Q0P5X1 1673 aa11.63□□□□□ -0.55
Trav14n-3-201ENSMUST00000103635 Ccdc180J3QNE4 1664 aa11.62□□□□□ -0.55
Trav14n-3-201ENSMUST00000103635 Unc13aQ4KUS2 1712 aa11.62□□□□□ -0.55
Trav14n-3-201ENSMUST00000103635 Zcchc6Q5BLK4 1491 aaKnown RBP11.6□□□□□ -0.55
Trav14n-3-201ENSMUST00000103635 Fam163aQ8CAA5 168 aa11.56□□□□□ -0.56
Trav14n-3-201ENSMUST00000103635 Pabpn1Q8CCS6 302 aaKnown RBP11.54□□□□□ -0.56
Trav14n-3-201ENSMUST00000103635 Cecr2E9Q2Z1 1453 aa11.54□□□□□ -0.56
Trav14n-3-201ENSMUST00000103635 Pcdh10E9PXQ7 1057 aa11.52□□□□□ -0.57
Trav14n-3-201ENSMUST00000103635 Top2bQ64511 1612 aa11.47□□□□□ -0.57
Trav14n-3-201ENSMUST00000103635 Eif4g3Q80XI3 1579 aaKnown RBP11.44□□□□□ -0.58
Trav14n-3-201ENSMUST00000103635 Zcchc11B2RX14 1644 aaKnown RBP11.41□□□□□ -0.58
Trav14n-3-201ENSMUST00000103635 Kcna4Q61423 654 aa11.37□□□□□ -0.59
Trav14n-3-201ENSMUST00000103635 Kif21aQ9QXL2 1672 aa11.34□□□□□ -0.59
Trav14n-3-201ENSMUST00000103635 Pelp1Q9DBD5 1123 aaKnown RBP11.32□□□□□ -0.6
Trav14n-3-201ENSMUST00000103635 Cux2P70298 1426 aa11.31□□□□□ -0.6
Trav14n-3-201ENSMUST00000103635 Arhgef5E9Q7D5 1581 aa11.31□□□□□ -0.6
Trav14n-3-201ENSMUST00000103635 Plb1Q3TTY0 1478 aa11.2□□□□□ -0.62
Trav14n-3-201ENSMUST00000103635 Npm1Q61937 292 aaKnown RBP11.19□□□□□ -0.62
Trav14n-3-201ENSMUST00000103635 Rhox8Q6VSS7 320 aa11.18□□□□□ -0.62
Trav14n-3-201ENSMUST00000103635 Ttbk1Q6PCN3 1308 aa11.17□□□□□ -0.62
Trav14n-3-201ENSMUST00000103635 Urb2E9Q7L1 1524 aaKnown RBP11.16□□□□□ -0.62
Trav14n-3-201ENSMUST00000103635 Kif15Q6P9L6 1387 aa11.15□□□□□ -0.63
Trav14n-3-201ENSMUST00000103635 CftrP26361 1476 aa11.14□□□□□ -0.63
Trav14n-3-201ENSMUST00000103635 Adgrl3Q80TS3 1537 aa11.13□□□□□ -0.63
Trav14n-3-201ENSMUST00000103635 Cttnbp2B9EJA2 1648 aa11.13□□□□□ -0.63
Trav14n-3-201ENSMUST00000103635 Hoxd11P23813 323 aa11.1□□□□□ -0.63
Trav14n-3-201ENSMUST00000103635 Cypt1Q8CH20 168 aa11.1□□□□□ -0.63
Trav14n-3-201ENSMUST00000103635 Plekhg3Q4VAC9 1341 aa11.09□□□□□ -0.63
Trav14n-3-201ENSMUST00000103635 PtprtQ99M80 1454 aa11.08□□□□□ -0.64
Trav14n-3-201ENSMUST00000103635 Gm156Q58A37 223 aa11.08□□□□□ -0.64
Trav14n-3-201ENSMUST00000103635 Cep164Q5DU05 1446 aa11.05□□□□□ -0.64
Trav14n-3-201ENSMUST00000103635 Rusc2Q80U22 1514 aa11.04□□□□□ -0.64
Trav14n-3-201ENSMUST00000103635 PtprkP35822 1457 aa11.03□□□□□ -0.64
Trav14n-3-201ENSMUST00000103635 Synj1Q8CHC4 1574 aa11.03□□□□□ -0.64
Trav14n-3-201ENSMUST00000103635 Dhx29Q6PGC1 1365 aaKnown RBP11.02□□□□□ -0.65
Trav14n-3-201ENSMUST00000103635 Lamc3Q9R0B6 1581 aa10.98□□□□□ -0.65
Trav14n-3-201ENSMUST00000103635 Ift140E9PY46 1464 aa10.97□□□□□ -0.65
Trav14n-3-201ENSMUST00000103635 Cep170Q6A065 1588 aa10.97□□□□□ -0.65
Trav14n-3-201ENSMUST00000103635 Gapvd1Q6PAR5 1458 aa10.93□□□□□ -0.66
Trav14n-3-201ENSMUST00000103635 Esf1Q3V1V3 845 aaKnown RBP10.93□□□□□ -0.66
Trav14n-3-201ENSMUST00000103635 Crocc2F6XLV1 1638 aa10.93□□□□□ -0.66
Trav14n-3-201ENSMUST00000103635 Brd4Q9ESU6 1400 aaKnown RBP10.92□□□□□ -0.66
Trav14n-3-201ENSMUST00000103635 LrpprcQ6PB66 1392 aaKnown RBP10.9□□□□□ -0.66
Trav14n-3-201ENSMUST00000103635 Pprc1Q6NZN1 1644 aa10.9□□□□□ -0.66
Trav14n-3-201ENSMUST00000103635 Trap1aP19473 224 aa10.89□□□□□ -0.67
Trav14n-3-201ENSMUST00000103635 Il27Q8K3I6 234 aa10.84□□□□□ -0.67
Trav14n-3-201ENSMUST00000103635 Setd1bQ8CFT2 1985 aa10.82□□□□□ -0.68
Trav14n-3-201ENSMUST00000103635 Ccdc18Q640L5 1455 aa10.81□□□□□ -0.68
Trav14n-3-201ENSMUST00000103635 Disp1Q3TDN0 1521 aa10.81□□□□□ -0.68
Trav14n-3-201ENSMUST00000103635 Cc2d2bA0A286YDU8 1405 aa10.81□□□□□ -0.68
Trav14n-3-201ENSMUST00000103635 Fgd6Q69ZL1 1399 aa10.8□□□□□ -0.68
Trav14n-3-201ENSMUST00000103635 Ppp1r18Q8BQ30 594 aa10.8□□□□□ -0.68
Trav14n-3-201ENSMUST00000103635 Rapgef2Q8CHG7 1496 aa10.79□□□□□ -0.68
Trav14n-3-201ENSMUST00000103635 Ythdc2B2RR83 1445 aaKnown RBP10.78□□□□□ -0.68
Trav14n-3-201ENSMUST00000103635 Fbxo41Q6NS60 873 aa10.78□□□□□ -0.68
Trav14n-3-201ENSMUST00000103635 Cyb5rlB1AS42 316 aa10.77□□□□□ -0.69
Trav14n-3-201ENSMUST00000103635 Setbp1Q9Z180 1582 aa10.76□□□□□ -0.69
Trav14n-3-201ENSMUST00000103635 PogzQ8BZH4 1409 aaKnown RBP10.75□□□□□ -0.69
Trav14n-3-201ENSMUST00000103635 Nup160Q9Z0W3 1402 aaKnown RBP10.75□□□□□ -0.69
Trav14n-3-201ENSMUST00000103635 Golga3P55937 1487 aa10.75□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms