RNA–Protein interactions for RNA: ENSMUST00000103613.2

Trav6n-6-201, Transcript of T cell receptor alpha variable 6N-6 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav6n-6, Length 287 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6-201ENSMUST00000103613 Gm35339A0A140LHH9 1649 aa11.15□□□□□ -0.62
Trav6n-6-201ENSMUST00000103613 NischQ80TM9 1593 aa11.08□□□□□ -0.64
Trav6n-6-201ENSMUST00000103613 Abcc9P70170 1546 aa10.84□□□□□ -0.67
Trav6n-6-201ENSMUST00000103613 Abcc8B2RUS7 1588 aa10.78□□□□□ -0.68
Trav6n-6-201ENSMUST00000103613 ScribQ80U72 1612 aa10.46□□□□□ -0.74
Trav6n-6-201ENSMUST00000103613 Mapk8ip2Q9ERE9 830 aa10.26□□□□□ -0.77
Trav6n-6-201ENSMUST00000103613 NacadQ5SWP3 1504 aa10.13□□□□□ -0.79
Trav6n-6-201ENSMUST00000103613 Dnajc5bQ9CQ94 199 aa10.13□□□□□ -0.79
Trav6n-6-201ENSMUST00000103613 Kdm5dQ62240 1548 aa10.1□□□□□ -0.79
Trav6n-6-201ENSMUST00000103613 Sycp2Q9CUU3 1500 aa9.97□□□□□ -0.81
Trav6n-6-201ENSMUST00000103613 BicraF8VPZ9 1578 aa9.86□□□□□ -0.83
Trav6n-6-201ENSMUST00000103613 Dcaf1Q80TR8 1506 aa9.77□□□□□ -0.84
Trav6n-6-201ENSMUST00000103613 Chic1Q8CBW7 227 aa9.68□□□□□ -0.86
Trav6n-6-201ENSMUST00000103613 Pds5bQ4VA53 1446 aaKnown RBP9.62□□□□□ -0.87
Trav6n-6-201ENSMUST00000103613 Rhox8Q6VSS7 320 aa9.6□□□□□ -0.87
Trav6n-6-201ENSMUST00000103613 Rb1cc1Q9ESK9 1588 aa9.59□□□□□ -0.87
Trav6n-6-201ENSMUST00000103613 Thoc2B1AZI6 1594 aaKnown RBP9.54□□□□□ -0.88
Trav6n-6-201ENSMUST00000103613 Atad2bE9Q166 1460 aaKnown RBP9.5□□□□□ -0.89
Trav6n-6-201ENSMUST00000103613 Zcchc6Q5BLK4 1491 aaKnown RBP9.46□□□□□ -0.9
Trav6n-6-201ENSMUST00000103613 Crybg2B7ZCC2 1516 aa9.46□□□□□ -0.9
Trav6n-6-201ENSMUST00000103613 Baz1aO88379 1555 aa9.45□□□□□ -0.9
Trav6n-6-201ENSMUST00000103613 Cc2d2aQ8CFW7 1633 aa9.43□□□□□ -0.9
Trav6n-6-201ENSMUST00000103613 Cecr2E9Q2Z1 1453 aa9.36□□□□□ -0.91
Trav6n-6-201ENSMUST00000103613 Ercc6F8VPZ5 1481 aa9.36□□□□□ -0.91
Trav6n-6-201ENSMUST00000103613 Smarca2Q6DIC0 1577 aa9.35□□□□□ -0.91
Trav6n-6-201ENSMUST00000103613 Ubl4bQ9CQ84 188 aa9.35□□□□□ -0.91
Trav6n-6-201ENSMUST00000103613 Phldb1Q6PDH0 1371 aaKnown RBP9.3□□□□□ -0.92
Trav6n-6-201ENSMUST00000103613 Frmpd1A2AKB4 1549 aa9.29□□□□□ -0.92
Trav6n-6-201ENSMUST00000103613 Smarca4Q3TKT4 1613 aaKnown RBP9.28□□□□□ -0.92
Trav6n-6-201ENSMUST00000103613 Fam135aQ6NS59 1506 aa9.28□□□□□ -0.92
Trav6n-6-201ENSMUST00000103613 Iqgap2Q3UQ44 1575 aa9.28□□□□□ -0.92
Trav6n-6-201ENSMUST00000103613 Dnajc5P60904 198 aa9.25□□□□□ -0.93
Trav6n-6-201ENSMUST00000103613 Trim41Q5NCC3 630 aa9.25□□□□□ -0.93
Trav6n-6-201ENSMUST00000103613 Ccdc180J3QNE4 1664 aa9.23□□□□□ -0.93
Trav6n-6-201ENSMUST00000103613 Wdr62Q3U3T8 1523 aa9.22□□□□□ -0.93
Trav6n-6-201ENSMUST00000103613 Mrc2Q64449 1479 aa9.12□□□□□ -0.95
Trav6n-6-201ENSMUST00000103613 Ccdc136Q3TVA9 1136 aa9.08□□□□□ -0.96
Trav6n-6-201ENSMUST00000103613 Baz1bQ9Z277 1479 aa9.06□□□□□ -0.96
Trav6n-6-201ENSMUST00000103613 CftrP26361 1476 aa9.04□□□□□ -0.96
Trav6n-6-201ENSMUST00000103613 Unc13aQ4KUS2 1712 aa9□□□□□ -0.97
Trav6n-6-201ENSMUST00000103613 Esf1Q3V1V3 845 aaKnown RBP9□□□□□ -0.97
Trav6n-6-201ENSMUST00000103613 Synj1Q8CHC4 1574 aa8.99□□□□□ -0.97
Trav6n-6-201ENSMUST00000103613 Cux2P70298 1426 aa8.97□□□□□ -0.97
Trav6n-6-201ENSMUST00000103613 Kif15Q6P9L6 1387 aa8.94□□□□□ -0.98
Trav6n-6-201ENSMUST00000103613 Npm1Q61937 292 aaKnown RBP8.93□□□□□ -0.98
Trav6n-6-201ENSMUST00000103613 Brd4Q9ESU6 1400 aaKnown RBP8.93□□□□□ -0.98
Trav6n-6-201ENSMUST00000103613 Cttnbp2B9EJA2 1648 aa8.9□□□□□ -0.99
Trav6n-6-201ENSMUST00000103613 Rsf1E9PWW9 1441 aaKnown RBP8.89□□□□□ -0.99
Trav6n-6-201ENSMUST00000103613 Lrriq1Q0P5X1 1673 aa8.88□□□□□ -0.99
Trav6n-6-201ENSMUST00000103613 Il27Q8K3I6 234 aa8.86□□□□□ -0.99
Trav6n-6-201ENSMUST00000103613 Pabpn1Q8CCS6 302 aaKnown RBP8.82□□□□□ -1
Trav6n-6-201ENSMUST00000103613 Kif21aQ9QXL2 1672 aa8.81□□□□□ -1
Trav6n-6-201ENSMUST00000103613 Plb1Q3TTY0 1478 aa8.78□□□□□ -1
Trav6n-6-201ENSMUST00000103613 Urb2E9Q7L1 1524 aaKnown RBP8.78□□□□□ -1
Trav6n-6-201ENSMUST00000103613 Cep164Q5DU05 1446 aa8.78□□□□□ -1
Trav6n-6-201ENSMUST00000103613 Shroom2A2ALU4 1481 aa8.77□□□□□ -1
Trav6n-6-201ENSMUST00000103613 Col17a1Q07563 1470 aa8.77□□□□□ -1
Trav6n-6-201ENSMUST00000103613 Pelp1Q9DBD5 1123 aaKnown RBP8.77□□□□□ -1.01
Trav6n-6-201ENSMUST00000103613 Dhx29Q6PGC1 1365 aaKnown RBP8.76□□□□□ -1.01
Trav6n-6-201ENSMUST00000103613 Lamc3Q9R0B6 1581 aa8.76□□□□□ -1.01
Trav6n-6-201ENSMUST00000103613 Eif4g3Q80XI3 1579 aaKnown RBP8.72□□□□□ -1.01
Trav6n-6-201ENSMUST00000103613 LrpprcQ6PB66 1392 aaKnown RBP8.72□□□□□ -1.01
Trav6n-6-201ENSMUST00000103613 Pcdh10E9PXQ7 1057 aa8.69□□□□□ -1.02
Trav6n-6-201ENSMUST00000103613 Cngb1E1AZ71 1325 aa8.69□□□□□ -1.02
Trav6n-6-201ENSMUST00000103613 Phf23Q8BSN5 401 aa8.66□□□□□ -1.02
Trav6n-6-201ENSMUST00000103613 Ccdc18Q640L5 1455 aa8.64□□□□□ -1.03
Trav6n-6-201ENSMUST00000103613 Rtl1Q7M732 1744 aa8.64□□□□□ -1.03
Trav6n-6-201ENSMUST00000103613 PogzQ8BZH4 1409 aaKnown RBP8.62□□□□□ -1.03
Trav6n-6-201ENSMUST00000103613 Top2bQ64511 1612 aa8.62□□□□□ -1.03
Trav6n-6-201ENSMUST00000103613 Ift140E9PY46 1464 aa8.6□□□□□ -1.03
Trav6n-6-201ENSMUST00000103613 Disp1Q3TDN0 1521 aa8.59□□□□□ -1.03
Trav6n-6-201ENSMUST00000103613 Crocc2F6XLV1 1638 aa8.59□□□□□ -1.03
Trav6n-6-201ENSMUST00000103613 Golga3P55937 1487 aa8.58□□□□□ -1.04
Trav6n-6-201ENSMUST00000103613 Gm156Q58A37 223 aa8.58□□□□□ -1.04
Trav6n-6-201ENSMUST00000103613 Duox2A2AQ99 1517 aa8.58□□□□□ -1.04
Trav6n-6-201ENSMUST00000103613 Camsap1A2AHC3 1581 aa8.56□□□□□ -1.04
Trav6n-6-201ENSMUST00000103613 Ttbk1Q6PCN3 1308 aa8.55□□□□□ -1.04
Trav6n-6-201ENSMUST00000103613 Rusc2Q80U22 1514 aa8.55□□□□□ -1.04
Trav6n-6-201ENSMUST00000103613 TnnQ80Z71 1560 aa8.55□□□□□ -1.04
Trav6n-6-201ENSMUST00000103613 Rad54l2Q99NG0 1466 aa8.51□□□□□ -1.05
Trav6n-6-201ENSMUST00000103613 Adgrl3Q80TS3 1537 aa8.5□□□□□ -1.05
Trav6n-6-201ENSMUST00000103613 Cc2d2bA0A286YDU8 1405 aa8.5□□□□□ -1.05
Trav6n-6-201ENSMUST00000103613 Nup160Q9Z0W3 1402 aaKnown RBP8.5□□□□□ -1.05
Trav6n-6-201ENSMUST00000103613 PtprkP35822 1457 aa8.5□□□□□ -1.05
Trav6n-6-201ENSMUST00000103613 Zcchc11B2RX14 1644 aaKnown RBP8.49□□□□□ -1.05
Trav6n-6-201ENSMUST00000103613 Grin2bQ01097 1482 aa8.49□□□□□ -1.05
Trav6n-6-201ENSMUST00000103613 Fgd6Q69ZL1 1399 aa8.48□□□□□ -1.05
Trav6n-6-201ENSMUST00000103613 Efcab5A0JP43 1406 aa8.47□□□□□ -1.05
Trav6n-6-201ENSMUST00000103613 Fmn1Q05860 1466 aa8.47□□□□□ -1.05
Trav6n-6-201ENSMUST00000103613 PtprtQ99M80 1454 aa8.46□□□□□ -1.05
Trav6n-6-201ENSMUST00000103613 Gapvd1Q6PAR5 1458 aa8.45□□□□□ -1.06
Trav6n-6-201ENSMUST00000103613 Arhgef5E9Q7D5 1581 aa8.44□□□□□ -1.06
Trav6n-6-201ENSMUST00000103613 Samd9lQ69Z37 1561 aa8.44□□□□□ -1.06
Trav6n-6-201ENSMUST00000103613 Arhgap27A2AB59 869 aa8.43□□□□□ -1.06
Trav6n-6-201ENSMUST00000103613 Ythdc2B2RR83 1445 aaKnown RBP8.43□□□□□ -1.06
Trav6n-6-201ENSMUST00000103613 AknaQ80VW7 1404 aa8.43□□□□□ -1.06
Trav6n-6-201ENSMUST00000103613 Cep170Q6A065 1588 aa8.41□□□□□ -1.06
Trav6n-6-201ENSMUST00000103613 Grin2aP35436 1464 aa8.41□□□□□ -1.06
Trav6n-6-201ENSMUST00000103613 AqrQ8CFQ3 1481 aaKnown RBP8.41□□□□□ -1.06
Trav6n-6-201ENSMUST00000103613 Magi3Q9EQJ9 1476 aa8.41□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms