RNA–Protein interactions for RNA: ENSMUST00000103580.3

Trav8d-1-201, Transcript of T cell receptor alpha variable 8D-1 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav8d-1, Length 400 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1-201ENSMUST00000103580 Gm35339A0A140LHH9 1649 aa15.6■□□□□ 0.09
Trav8d-1-201ENSMUST00000103580 Abcc9P70170 1546 aa15.41■□□□□ 0.06
Trav8d-1-201ENSMUST00000103580 NischQ80TM9 1593 aa15.15■□□□□ 0.02
Trav8d-1-201ENSMUST00000103580 Abcc8B2RUS7 1588 aa14.83□□□□□ -0.04
Trav8d-1-201ENSMUST00000103580 ScribQ80U72 1612 aa14.77□□□□□ -0.04
Trav8d-1-201ENSMUST00000103580 Dnajc5bQ9CQ94 199 aa14.6□□□□□ -0.07
Trav8d-1-201ENSMUST00000103580 NacadQ5SWP3 1504 aa14.13□□□□□ -0.15
Trav8d-1-201ENSMUST00000103580 Kdm5dQ62240 1548 aa14.1□□□□□ -0.15
Trav8d-1-201ENSMUST00000103580 Sycp2Q9CUU3 1500 aa13.9□□□□□ -0.18
Trav8d-1-201ENSMUST00000103580 BicraF8VPZ9 1578 aa13.87□□□□□ -0.19
Trav8d-1-201ENSMUST00000103580 Dnajc5P60904 198 aa13.8□□□□□ -0.2
Trav8d-1-201ENSMUST00000103580 Thoc2B1AZI6 1594 aaKnown RBP13.75□□□□□ -0.21
Trav8d-1-201ENSMUST00000103580 Pds5bQ4VA53 1446 aaKnown RBP13.56□□□□□ -0.24
Trav8d-1-201ENSMUST00000103580 Cc2d2aQ8CFW7 1633 aa13.54□□□□□ -0.24
Trav8d-1-201ENSMUST00000103580 Trim41Q5NCC3 630 aa13.51□□□□□ -0.25
Trav8d-1-201ENSMUST00000103580 Dcaf1Q80TR8 1506 aa13.47□□□□□ -0.25
Trav8d-1-201ENSMUST00000103580 Ercc6F8VPZ5 1481 aa13.3□□□□□ -0.28
Trav8d-1-201ENSMUST00000103580 Atad2bE9Q166 1460 aaKnown RBP13.29□□□□□ -0.28
Trav8d-1-201ENSMUST00000103580 Fam135aQ6NS59 1506 aa13.28□□□□□ -0.28
Trav8d-1-201ENSMUST00000103580 Rb1cc1Q9ESK9 1588 aa13.19□□□□□ -0.3
Trav8d-1-201ENSMUST00000103580 Smarca2Q6DIC0 1577 aa13.09□□□□□ -0.31
Trav8d-1-201ENSMUST00000103580 Phldb1Q6PDH0 1371 aaKnown RBP13.01□□□□□ -0.33
Trav8d-1-201ENSMUST00000103580 Iqgap2Q3UQ44 1575 aa13□□□□□ -0.33
Trav8d-1-201ENSMUST00000103580 Wdr62Q3U3T8 1523 aa12.98□□□□□ -0.33
Trav8d-1-201ENSMUST00000103580 Mrc2Q64449 1479 aa12.98□□□□□ -0.33
Trav8d-1-201ENSMUST00000103580 Ubl4bQ9CQ84 188 aa12.98□□□□□ -0.33
Trav8d-1-201ENSMUST00000103580 Frmpd1A2AKB4 1549 aa12.97□□□□□ -0.33
Trav8d-1-201ENSMUST00000103580 Smarca4Q3TKT4 1613 aaKnown RBP12.95□□□□□ -0.34
Trav8d-1-201ENSMUST00000103580 Baz1bQ9Z277 1479 aa12.94□□□□□ -0.34
Trav8d-1-201ENSMUST00000103580 Zcchc6Q5BLK4 1491 aaKnown RBP12.92□□□□□ -0.34
Trav8d-1-201ENSMUST00000103580 Baz1aO88379 1555 aa12.89□□□□□ -0.35
Trav8d-1-201ENSMUST00000103580 Crybg2B7ZCC2 1516 aa12.82□□□□□ -0.36
Trav8d-1-201ENSMUST00000103580 Unc13aQ4KUS2 1712 aa12.82□□□□□ -0.36
Trav8d-1-201ENSMUST00000103580 Lrriq1Q0P5X1 1673 aa12.8□□□□□ -0.36
Trav8d-1-201ENSMUST00000103580 Col17a1Q07563 1470 aa12.78□□□□□ -0.36
Trav8d-1-201ENSMUST00000103580 Shroom2A2ALU4 1481 aa12.77□□□□□ -0.37
Trav8d-1-201ENSMUST00000103580 Cecr2E9Q2Z1 1453 aa12.77□□□□□ -0.37
Trav8d-1-201ENSMUST00000103580 Rsf1E9PWW9 1441 aaKnown RBP12.71□□□□□ -0.38
Trav8d-1-201ENSMUST00000103580 Ccdc180J3QNE4 1664 aa12.68□□□□□ -0.38
Trav8d-1-201ENSMUST00000103580 Pcdh10E9PXQ7 1057 aa12.59□□□□□ -0.39
Trav8d-1-201ENSMUST00000103580 Eif4g3Q80XI3 1579 aaKnown RBP12.58□□□□□ -0.4
Trav8d-1-201ENSMUST00000103580 Top2bQ64511 1612 aa12.55□□□□□ -0.4
Trav8d-1-201ENSMUST00000103580 Kif21aQ9QXL2 1672 aa12.55□□□□□ -0.4
Trav8d-1-201ENSMUST00000103580 Pabpn1Q8CCS6 302 aaKnown RBP12.55□□□□□ -0.4
Trav8d-1-201ENSMUST00000103580 Rhox8Q6VSS7 320 aa12.53□□□□□ -0.4
Trav8d-1-201ENSMUST00000103580 Pelp1Q9DBD5 1123 aaKnown RBP12.51□□□□□ -0.41
Trav8d-1-201ENSMUST00000103580 Cux2P70298 1426 aa12.45□□□□□ -0.42
Trav8d-1-201ENSMUST00000103580 Zcchc11B2RX14 1644 aaKnown RBP12.4□□□□□ -0.42
Trav8d-1-201ENSMUST00000103580 Arhgef5E9Q7D5 1581 aa12.39□□□□□ -0.43
Trav8d-1-201ENSMUST00000103580 Ttbk1Q6PCN3 1308 aa12.34□□□□□ -0.43
Trav8d-1-201ENSMUST00000103580 Urb2E9Q7L1 1524 aaKnown RBP12.31□□□□□ -0.44
Trav8d-1-201ENSMUST00000103580 Kif15Q6P9L6 1387 aa12.3□□□□□ -0.44
Trav8d-1-201ENSMUST00000103580 Cttnbp2B9EJA2 1648 aa12.29□□□□□ -0.44
Trav8d-1-201ENSMUST00000103580 Plb1Q3TTY0 1478 aa12.29□□□□□ -0.44
Trav8d-1-201ENSMUST00000103580 CftrP26361 1476 aa12.28□□□□□ -0.44
Trav8d-1-201ENSMUST00000103580 Npm1Q61937 292 aaKnown RBP12.25□□□□□ -0.45
Trav8d-1-201ENSMUST00000103580 Synj1Q8CHC4 1574 aa12.25□□□□□ -0.45
Trav8d-1-201ENSMUST00000103580 Adgrl3Q80TS3 1537 aa12.22□□□□□ -0.45
Trav8d-1-201ENSMUST00000103580 Rusc2Q80U22 1514 aa12.17□□□□□ -0.46
Trav8d-1-201ENSMUST00000103580 Cep164Q5DU05 1446 aa12.14□□□□□ -0.47
Trav8d-1-201ENSMUST00000103580 Plekhg3Q4VAC9 1341 aa12.13□□□□□ -0.47
Trav8d-1-201ENSMUST00000103580 Dhx29Q6PGC1 1365 aaKnown RBP12.13□□□□□ -0.47
Trav8d-1-201ENSMUST00000103580 PtprtQ99M80 1454 aa12.12□□□□□ -0.47
Trav8d-1-201ENSMUST00000103580 Esf1Q3V1V3 845 aaKnown RBP12.1□□□□□ -0.47
Trav8d-1-201ENSMUST00000103580 Cep170Q6A065 1588 aa12.09□□□□□ -0.47
Trav8d-1-201ENSMUST00000103580 PtprkP35822 1457 aa12.08□□□□□ -0.48
Trav8d-1-201ENSMUST00000103580 Crocc2F6XLV1 1638 aa12.07□□□□□ -0.48
Trav8d-1-201ENSMUST00000103580 Lamc3Q9R0B6 1581 aa12.06□□□□□ -0.48
Trav8d-1-201ENSMUST00000103580 Gm156Q58A37 223 aa12.06□□□□□ -0.48
Trav8d-1-201ENSMUST00000103580 Il27Q8K3I6 234 aa12.06□□□□□ -0.48
Trav8d-1-201ENSMUST00000103580 Brd4Q9ESU6 1400 aaKnown RBP12.03□□□□□ -0.48
Trav8d-1-201ENSMUST00000103580 Ift140E9PY46 1464 aa12.02□□□□□ -0.49
Trav8d-1-201ENSMUST00000103580 Gapvd1Q6PAR5 1458 aa12.02□□□□□ -0.49
Trav8d-1-201ENSMUST00000103580 Pprc1Q6NZN1 1644 aa11.99□□□□□ -0.49
Trav8d-1-201ENSMUST00000103580 LrpprcQ6PB66 1392 aaKnown RBP11.94□□□□□ -0.5
Trav8d-1-201ENSMUST00000103580 Cypt1Q8CH20 168 aa11.93□□□□□ -0.5
Trav8d-1-201ENSMUST00000103580 Ccdc18Q640L5 1455 aa11.9□□□□□ -0.5
Trav8d-1-201ENSMUST00000103580 Ppp1r18Q8BQ30 594 aa11.88□□□□□ -0.51
Trav8d-1-201ENSMUST00000103580 Disp1Q3TDN0 1521 aa11.86□□□□□ -0.51
Trav8d-1-201ENSMUST00000103580 Ccdc136Q3TVA9 1136 aa11.86□□□□□ -0.51
Trav8d-1-201ENSMUST00000103580 Setd1bQ8CFT2 1985 aa11.86□□□□□ -0.51
Trav8d-1-201ENSMUST00000103580 Rapgef2Q8CHG7 1496 aa11.85□□□□□ -0.51
Trav8d-1-201ENSMUST00000103580 PogzQ8BZH4 1409 aaKnown RBP11.83□□□□□ -0.52
Trav8d-1-201ENSMUST00000103580 Fgd6Q69ZL1 1399 aa11.82□□□□□ -0.52
Trav8d-1-201ENSMUST00000103580 Plppr3Q7TPB0 716 aa11.82□□□□□ -0.52
Trav8d-1-201ENSMUST00000103580 Camsap1A2AHC3 1581 aa11.82□□□□□ -0.52
Trav8d-1-201ENSMUST00000103580 Ythdc2B2RR83 1445 aaKnown RBP11.81□□□□□ -0.52
Trav8d-1-201ENSMUST00000103580 AknaQ80VW7 1404 aa11.81□□□□□ -0.52
Trav8d-1-201ENSMUST00000103580 Cc2d2bA0A286YDU8 1405 aa11.8□□□□□ -0.52
Trav8d-1-201ENSMUST00000103580 Nup160Q9Z0W3 1402 aaKnown RBP11.8□□□□□ -0.52
Trav8d-1-201ENSMUST00000103580 Golga3P55937 1487 aa11.79□□□□□ -0.52
Trav8d-1-201ENSMUST00000103580 Abcc1O35379 1528 aa11.79□□□□□ -0.52
Trav8d-1-201ENSMUST00000103580 Top2aQ01320 1528 aaKnown RBP11.78□□□□□ -0.52
Trav8d-1-201ENSMUST00000103580 Setbp1Q9Z180 1582 aa11.78□□□□□ -0.52
Trav8d-1-201ENSMUST00000103580 Alpk3Q924C5 1678 aa11.78□□□□□ -0.52
Trav8d-1-201ENSMUST00000103580 Duox2A2AQ99 1517 aa11.77□□□□□ -0.52
Trav8d-1-201ENSMUST00000103580 Cyb5rlB1AS42 316 aa11.77□□□□□ -0.53
Trav8d-1-201ENSMUST00000103580 Pbrm1Q8BSQ9 1634 aaKnown RBP11.76□□□□□ -0.53
Trav8d-1-201ENSMUST00000103580 Rtl1Q7M732 1744 aa11.74□□□□□ -0.53
Trav8d-1-201ENSMUST00000103580 Ak9G3UYQ4 1894 aa11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 56.1 ms