RNA–Protein interactions for RNA: ENSMUST00000103262.2

Trbv1-201, Transcript of T cell receptor beta, variable 1 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trbv1, Length 417 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1-201ENSMUST00000103262 Gm35339A0A140LHH9 1649 aa17.85■□□□□ 0.45
Trbv1-201ENSMUST00000103262 Abcc9P70170 1546 aa17.59■□□□□ 0.41
Trbv1-201ENSMUST00000103262 NischQ80TM9 1593 aa17.29■□□□□ 0.36
Trbv1-201ENSMUST00000103262 Abcc8B2RUS7 1588 aa16.98■□□□□ 0.31
Trbv1-201ENSMUST00000103262 ScribQ80U72 1612 aa16.9■□□□□ 0.3
Trbv1-201ENSMUST00000103262 Dnajc5bQ9CQ94 199 aa16.82■□□□□ 0.28
Trbv1-201ENSMUST00000103262 NacadQ5SWP3 1504 aa16.19■□□□□ 0.18
Trbv1-201ENSMUST00000103262 Kdm5dQ62240 1548 aa16.12■□□□□ 0.17
Trbv1-201ENSMUST00000103262 Dnajc5P60904 198 aa15.96■□□□□ 0.15
Trbv1-201ENSMUST00000103262 Sycp2Q9CUU3 1500 aa15.94■□□□□ 0.14
Trbv1-201ENSMUST00000103262 BicraF8VPZ9 1578 aa15.91■□□□□ 0.14
Trbv1-201ENSMUST00000103262 Thoc2B1AZI6 1594 aaKnown RBP15.78■□□□□ 0.12
Trbv1-201ENSMUST00000103262 Pds5bQ4VA53 1446 aaKnown RBP15.56■□□□□ 0.08
Trbv1-201ENSMUST00000103262 Cc2d2aQ8CFW7 1633 aa15.49■□□□□ 0.07
Trbv1-201ENSMUST00000103262 Dcaf1Q80TR8 1506 aa15.43■□□□□ 0.06
Trbv1-201ENSMUST00000103262 Trim41Q5NCC3 630 aa15.42■□□□□ 0.06
Trbv1-201ENSMUST00000103262 Atad2bE9Q166 1460 aaKnown RBP15.27■□□□□ 0.03
Trbv1-201ENSMUST00000103262 Fam135aQ6NS59 1506 aa15.23■□□□□ 0.03
Trbv1-201ENSMUST00000103262 Ercc6F8VPZ5 1481 aa15.19■□□□□ 0.02
Trbv1-201ENSMUST00000103262 Rb1cc1Q9ESK9 1588 aa15.01□□□□□ -0.01
Trbv1-201ENSMUST00000103262 Smarca2Q6DIC0 1577 aa14.98□□□□□ -0.01
Trbv1-201ENSMUST00000103262 Phldb1Q6PDH0 1371 aaKnown RBP14.95□□□□□ -0.02
Trbv1-201ENSMUST00000103262 Baz1bQ9Z277 1479 aa14.94□□□□□ -0.02
Trbv1-201ENSMUST00000103262 Ubl4bQ9CQ84 188 aa14.88□□□□□ -0.03
Trbv1-201ENSMUST00000103262 Mrc2Q64449 1479 aa14.88□□□□□ -0.03
Trbv1-201ENSMUST00000103262 Frmpd1A2AKB4 1549 aa14.87□□□□□ -0.03
Trbv1-201ENSMUST00000103262 Wdr62Q3U3T8 1523 aa14.86□□□□□ -0.03
Trbv1-201ENSMUST00000103262 Iqgap2Q3UQ44 1575 aa14.85□□□□□ -0.03
Trbv1-201ENSMUST00000103262 Smarca4Q3TKT4 1613 aaKnown RBP14.8□□□□□ -0.04
Trbv1-201ENSMUST00000103262 Crybg2B7ZCC2 1516 aa14.74□□□□□ -0.05
Trbv1-201ENSMUST00000103262 Shroom2A2ALU4 1481 aa14.71□□□□□ -0.05
Trbv1-201ENSMUST00000103262 Col17a1Q07563 1470 aa14.71□□□□□ -0.05
Trbv1-201ENSMUST00000103262 Baz1aO88379 1555 aa14.7□□□□□ -0.06
Trbv1-201ENSMUST00000103262 Zcchc6Q5BLK4 1491 aaKnown RBP14.69□□□□□ -0.06
Trbv1-201ENSMUST00000103262 Lrriq1Q0P5X1 1673 aa14.61□□□□□ -0.07
Trbv1-201ENSMUST00000103262 Unc13aQ4KUS2 1712 aa14.6□□□□□ -0.07
Trbv1-201ENSMUST00000103262 Rsf1E9PWW9 1441 aaKnown RBP14.59□□□□□ -0.07
Trbv1-201ENSMUST00000103262 Cecr2E9Q2Z1 1453 aa14.59□□□□□ -0.07
Trbv1-201ENSMUST00000103262 Ccdc180J3QNE4 1664 aa14.49□□□□□ -0.09
Trbv1-201ENSMUST00000103262 Pcdh10E9PXQ7 1057 aa14.48□□□□□ -0.09
Trbv1-201ENSMUST00000103262 Pabpn1Q8CCS6 302 aaKnown RBP14.41□□□□□ -0.1
Trbv1-201ENSMUST00000103262 Eif4g3Q80XI3 1579 aaKnown RBP14.37□□□□□ -0.11
Trbv1-201ENSMUST00000103262 Top2bQ64511 1612 aa14.36□□□□□ -0.11
Trbv1-201ENSMUST00000103262 Kif21aQ9QXL2 1672 aa14.29□□□□□ -0.12
Trbv1-201ENSMUST00000103262 Zcchc11B2RX14 1644 aaKnown RBP14.25□□□□□ -0.13
Trbv1-201ENSMUST00000103262 Pelp1Q9DBD5 1123 aaKnown RBP14.24□□□□□ -0.13
Trbv1-201ENSMUST00000103262 Cux2P70298 1426 aa14.24□□□□□ -0.13
Trbv1-201ENSMUST00000103262 Arhgef5E9Q7D5 1581 aa14.18□□□□□ -0.14
Trbv1-201ENSMUST00000103262 Rhox8Q6VSS7 320 aa14.14□□□□□ -0.15
Trbv1-201ENSMUST00000103262 Plb1Q3TTY0 1478 aa14.09□□□□□ -0.15
Trbv1-201ENSMUST00000103262 Urb2E9Q7L1 1524 aaKnown RBP14.06□□□□□ -0.16
Trbv1-201ENSMUST00000103262 Kif15Q6P9L6 1387 aa14.06□□□□□ -0.16
Trbv1-201ENSMUST00000103262 CftrP26361 1476 aa14.06□□□□□ -0.16
Trbv1-201ENSMUST00000103262 Ttbk1Q6PCN3 1308 aa14.04□□□□□ -0.16
Trbv1-201ENSMUST00000103262 Adgrl3Q80TS3 1537 aa14□□□□□ -0.17
Trbv1-201ENSMUST00000103262 Cttnbp2B9EJA2 1648 aa14□□□□□ -0.17
Trbv1-201ENSMUST00000103262 Npm1Q61937 292 aaKnown RBP13.99□□□□□ -0.17
Trbv1-201ENSMUST00000103262 Synj1Q8CHC4 1574 aa13.93□□□□□ -0.18
Trbv1-201ENSMUST00000103262 PtprtQ99M80 1454 aa13.93□□□□□ -0.18
Trbv1-201ENSMUST00000103262 Rusc2Q80U22 1514 aa13.91□□□□□ -0.18
Trbv1-201ENSMUST00000103262 Plekhg3Q4VAC9 1341 aa13.9□□□□□ -0.19
Trbv1-201ENSMUST00000103262 Dhx29Q6PGC1 1365 aaKnown RBP13.88□□□□□ -0.19
Trbv1-201ENSMUST00000103262 Gm156Q58A37 223 aa13.87□□□□□ -0.19
Trbv1-201ENSMUST00000103262 Cep164Q5DU05 1446 aa13.87□□□□□ -0.19
Trbv1-201ENSMUST00000103262 Cypt1Q8CH20 168 aa13.85□□□□□ -0.19
Trbv1-201ENSMUST00000103262 PtprkP35822 1457 aa13.84□□□□□ -0.19
Trbv1-201ENSMUST00000103262 Cep170Q6A065 1588 aa13.81□□□□□ -0.2
Trbv1-201ENSMUST00000103262 Lamc3Q9R0B6 1581 aa13.79□□□□□ -0.2
Trbv1-201ENSMUST00000103262 Ift140E9PY46 1464 aa13.76□□□□□ -0.21
Trbv1-201ENSMUST00000103262 Gapvd1Q6PAR5 1458 aa13.75□□□□□ -0.21
Trbv1-201ENSMUST00000103262 Crocc2F6XLV1 1638 aa13.75□□□□□ -0.21
Trbv1-201ENSMUST00000103262 Pprc1Q6NZN1 1644 aa13.74□□□□□ -0.21
Trbv1-201ENSMUST00000103262 Brd4Q9ESU6 1400 aaKnown RBP13.73□□□□□ -0.21
Trbv1-201ENSMUST00000103262 Esf1Q3V1V3 845 aaKnown RBP13.72□□□□□ -0.21
Trbv1-201ENSMUST00000103262 LrpprcQ6PB66 1392 aaKnown RBP13.7□□□□□ -0.22
Trbv1-201ENSMUST00000103262 Il27Q8K3I6 234 aa13.69□□□□□ -0.22
Trbv1-201ENSMUST00000103262 Disp1Q3TDN0 1521 aa13.6□□□□□ -0.23
Trbv1-201ENSMUST00000103262 Rapgef2Q8CHG7 1496 aa13.58□□□□□ -0.24
Trbv1-201ENSMUST00000103262 Ccdc18Q640L5 1455 aa13.57□□□□□ -0.24
Trbv1-201ENSMUST00000103262 Fgd6Q69ZL1 1399 aa13.56□□□□□ -0.24
Trbv1-201ENSMUST00000103262 Ppp1r18Q8BQ30 594 aa13.55□□□□□ -0.24
Trbv1-201ENSMUST00000103262 Cc2d2bA0A286YDU8 1405 aa13.55□□□□□ -0.24
Trbv1-201ENSMUST00000103262 Ythdc2B2RR83 1445 aaKnown RBP13.55□□□□□ -0.24
Trbv1-201ENSMUST00000103262 Nup160Q9Z0W3 1402 aaKnown RBP13.55□□□□□ -0.24
Trbv1-201ENSMUST00000103262 Setd1bQ8CFT2 1985 aa13.54□□□□□ -0.24
Trbv1-201ENSMUST00000103262 PogzQ8BZH4 1409 aaKnown RBP13.54□□□□□ -0.24
Trbv1-201ENSMUST00000103262 Setbp1Q9Z180 1582 aa13.52□□□□□ -0.25
Trbv1-201ENSMUST00000103262 Alpk3Q924C5 1678 aa13.5□□□□□ -0.25
Trbv1-201ENSMUST00000103262 Golga3P55937 1487 aa13.49□□□□□ -0.25
Trbv1-201ENSMUST00000103262 Abcc1O35379 1528 aa13.48□□□□□ -0.25
Trbv1-201ENSMUST00000103262 Camsap1A2AHC3 1581 aa13.47□□□□□ -0.25
Trbv1-201ENSMUST00000103262 Cyb5rlB1AS42 316 aa13.47□□□□□ -0.25
Trbv1-201ENSMUST00000103262 Ccdc88bQ4QRL3 1481 aa13.47□□□□□ -0.25
Trbv1-201ENSMUST00000103262 Duox2A2AQ99 1517 aa13.46□□□□□ -0.25
Trbv1-201ENSMUST00000103262 Fbxo41Q6NS60 873 aa13.46□□□□□ -0.25
Trbv1-201ENSMUST00000103262 AknaQ80VW7 1404 aa13.45□□□□□ -0.26
Trbv1-201ENSMUST00000103262 Ccdc136Q3TVA9 1136 aa13.44□□□□□ -0.26
Trbv1-201ENSMUST00000103262 Pbrm1Q8BSQ9 1634 aaKnown RBP13.41□□□□□ -0.26
Trbv1-201ENSMUST00000103262 AqrQ8CFQ3 1481 aaKnown RBP13.4□□□□□ -0.26
Trbv1-201ENSMUST00000103262 TnnQ80Z71 1560 aa13.4□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 92.4 ms